| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS33915 | | isopropylmalate isomerase | 1.0 | BPHYT_RS17885 | | 3-dehydroquinate synthase | 0.89 | 19 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.97 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | 0.96 | H281DRAFT_05615 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia graminis OAS925 | 0.96 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | 0.96 | ABIE53_003740 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.95 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | 0.89 | QEN71_RS28035 | | 3-dehydroquinate synthase | 0.66 | 64 |
| Ralstonia solanacearum PSI07 | 0.87 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | 0.71 | RPSI07_RS10300 | | 3-dehydroquinate synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.87 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.71 | ABZR87_RS02590 | | 3-dehydroquinate synthase | 0.85 | 20 |
| Ralstonia solanacearum UW163 | 0.87 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | 0.72 | UW163_RS06680 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.87 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | 0.72 | RALBFv3_RS06935 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum GMI1000 | 0.87 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | 0.71 | RS_RS14880 | | 3-dehydroquinate synthase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.86 | RR42_RS14400 | | isopropylmalate isomerase | 0.75 | RR42_RS19005 | | 3-dehydroquinate synthase | 0.78 | 19 |
| Castellaniella sp019104865 MT123 | 0.77 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | 0.58 | ABCV34_RS12705 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. OAS795 | 0.75 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | 0.63 | ABID97_RS23255 | | 3-dehydroquinate synthase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.75 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.60 | GFF1331 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.57 | 49 |
| Variovorax sp. SCN45 | 0.75 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.61 | GFF5325 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.80 | 2 |
| Acidovorax sp. GW101-3H11 | 0.74 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.56 | Ac3H11_4705 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.80 | 36 |
| Marinobacter adhaerens HP15 | 0.73 | HP15_1834 | | protein containing 3-isopropylmalate dehydratase, large subunit region domain | 0.55 | HP15_480 | | 3-dehydroquinate synthase | — | — |
| Kangiella aquimarina DSM 16071 | 0.73 | B158DRAFT_1319 | | 3-isopropylmalate dehydratase, large subunit | 0.44 | B158DRAFT_0764 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 40 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | 0.54 | PFR28_05013 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_21400 | | isopropylmalate isomerase | 0.56 | AO356_09385 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.72 | AO353_20620 | | isopropylmalate isomerase | 0.55 | AO353_12505 | | 3-dehydroquinate synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.72 | Xcc-8004.1049.1 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.38 | Xcc-8004.1615.1 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.66 | 72 |
| Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.56 | Pf6N2E2_3754 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.72 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.56 | PfGW456L13_275 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.65 | 71 |
| Pseudomonas stutzeri RCH2 | 0.72 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | 0.54 | Psest_3713 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.56 | Pf1N1B4_1537 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas simiae WCS417 | 0.72 | PS417_18600 | | isopropylmalate isomerase | 0.57 | PS417_01985 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas putida KT2440 | 0.72 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.58 | PP_5078 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25 | 0.71 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.57 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.71 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.57 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. S08-1 | 0.71 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | 0.57 | OH686_10015 | | 3-dehydroquinate synthase | — | — |
| Dechlorosoma suillum PS | 0.70 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | 0.57 | Dsui_1095 | | 3-dehydroquinate synthase | — | — |
| Rhodospirillum rubrum S1H | 0.69 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | 0.43 | Rru_A3741 | | 3-dehydroquinate synthase (NCBI) | — | — |
| Acinetobacter radioresistens SK82 | 0.68 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | 0.55 | MPMX26_02810 | | 3-dehydroquinate synthase | — | — |
| Azospirillum sp. SherDot2 | 0.68 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.39 | MPMX19_02639 | | 3-dehydroquinate synthase | — | — |
| Azospirillum brasilense Sp245 | 0.68 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.38 | AZOBR_RS03220 | | 3-dehydroquinate synthase | — | — |
| Sinorhizobium meliloti 1021 | 0.66 | SMc03823 | | isopropylmalate isomerase large subunit | 0.38 | SMc00696 | | 3-dehydroquinate synthase | — | — |
| Rhizobium sp. OAE497 | 0.65 | ABIE40_RS18380 | | 3-isopropylmalate dehydratase large subunit | 0.38 | ABIE40_RS17670 | | 3-dehydroquinate synthase | — | — |
| Agrobacterium fabrum C58 | 0.65 | Atu2709 | | 3-isopropylmalate dehydratase, large subunit | 0.36 | Atu3625 | | 3-dehydroquinate synthase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.64 | TX73_001245 | | 3-isopropylmalate dehydratase large subunit | 0.37 | TX73_002610 | | 3-dehydroquinate synthase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.64 | AMB_RS20560 | | 3-isopropylmalate dehydratase large subunit | 0.40 | AMB_RS19865 | | 3-dehydroquinate synthase | — | — |
| Pantoea sp. MT58 | 0.62 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.50 | IAI47_01895 | | 3-dehydroquinate synthase | — | — |
| Enterobacter asburiae PDN3 | 0.62 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | 0.48 | EX28DRAFT_4153 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 76 |
| Escherichia fergusonii Becca | 0.62 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | 0.50 | EFB2_00439 | | 3-dehydroquinate synthase | 0.62 | 7 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.62 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.48 | GFF630 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 78 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.51 | NOLOHH_08905 | aroB | 3-dehydroquinate synthase | 0.91 | 48 |
| Escherichia coli BW25113 | 0.62 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | 0.50 | b3389 | aroB | 3-dehydroquinate synthase (NCBI) | 0.93 | 27 |
| Escherichia coli ECRC62 | 0.62 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.51 | BNILDI_02615 | aroB | 3-dehydroquinate synthase | 0.94 | 55 |
| Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | 0.50 | ECOLIN_RS19360 | | 3-dehydroquinate synthase | 0.82 | 31 |
| Escherichia coli BL21 | 0.62 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | 0.51 | ECD_03241 | | 3-dehydroquinate synthase | low | > 61 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.50 | HEPCGN_15935 | aroB | 3-dehydroquinate synthase | 0.84 | 74 |
| Caulobacter crescentus NA1000 | 0.62 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.40 | CCNA_03104 | | 3-dehydroquinate synthase | 0.91 | 39 |
| Rahnella sp. WP5 | 0.62 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.51 | EX31_RS04720 | | 3-dehydroquinate synthase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.62 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.40 | CCNA_03104 | | 3-dehydroquinate synthase | low | > 67 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | 0.51 | OHPLBJKB_00314 | | 3-dehydroquinate synthase | low | > 73 |
| Dickeya dianthicola ME23 | 0.62 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.48 | DZA65_RS20760 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola 67-19 | 0.62 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.48 | HGI48_RS19675 | | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC100 | 0.61 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.50 | OKFHMN_17115 | aroB | 3-dehydroquinate synthase | 0.94 | 47 |
| Escherichia coli ECRC99 | 0.61 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.50 | KEDOAH_11025 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC102 | 0.61 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.50 | NIAGMN_14885 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC98 | 0.61 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.50 | JDDGAC_20745 | aroB | 3-dehydroquinate synthase | 0.89 | 40 |
| Escherichia coli ECRC101 | 0.61 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.50 | MCAODC_07645 | aroB | 3-dehydroquinate synthase | 0.81 | 55 |
| Enterobacter sp. TBS_079 | 0.61 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | 0.49 | MPMX20_04278 | | 3-dehydroquinate synthase | 0.80 | 54 |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.49 | BWI76_RS26085 | | 3-dehydroquinate synthase | 0.60 | 78 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | 0.49 | DDA3937_RS19545 | | 3-dehydroquinate synthase | — | — |
| Pectobacterium carotovorum WPP14 | 0.61 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.48 | HER17_RS01780 | | 3-dehydroquinate synthase | low | > 75 |
| Rhodanobacter denitrificans FW104-10B01 | 0.60 | LRK54_RS07375 | | 3-isopropylmalate dehydratase large subunit | 0.41 | LRK54_RS04310 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter denitrificans MT42 | 0.60 | LRK55_RS07105 | | 3-isopropylmalate dehydratase large subunit | 0.41 | LRK55_RS04085 | | 3-dehydroquinate synthase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.59 | PGA1_c29780 | | 3-isopropylmalate dehydratase large subunit | 0.37 | PGA1_c14100 | | 3-dehydroquinate synthase AroB | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.59 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | 0.50 | CSW01_13300 | | 3-dehydroquinate synthase | low | > 62 |
| Serratia liquefaciens MT49 | 0.59 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | 0.49 | IAI46_23700 | | 3-dehydroquinate synthase | 0.72 | 25 |
| Shewanella oneidensis MR-1 | 0.59 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.53 | SO0287 | aroB | 3-dehydroquinate synthase (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.59 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | 0.51 | Shew_0214 | | 3-dehydroquinate synthase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | 0.52 | Shewana3_3893 | aroB | 3-dehydroquinate synthase (RefSeq) | 0.90 | 47 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | 0.48 | LU632_RS22865 | aroB | 3-dehydroquinate synthase | low | > 74 |
| Shewanella amazonensis SB2B | 0.58 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | 0.55 | Sama_3367 | | 3-dehydroquinate synthase (RefSeq) | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.58 | Dshi_0085 | | 3-isopropylmalate dehydratase, large subunit (RefSeq) | 0.36 | Dshi_1608 | | 3-dehydroquinate synthase (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.58 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | 0.35 | Ga0059261_3591 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Mycobacterium tuberculosis H37Rv | 0.57 | Rv2988c | | Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | 0.30 | Rv2538c | | 3-dehydroquinate synthase AroB | — | — |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_00947 | | 3-isopropylmalate dehydratase large subunit | 0.53 | MIT1002_00447 | | 3-dehydroquinate synthase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.52 | ABZR88_RS11595 | | 3-isopropylmalate dehydratase large subunit | 0.27 | ABZR88_RS05215 | | 3-dehydroquinate synthase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.51 | CA264_09435 | | 3-isopropylmalate dehydratase large subunit | 0.24 | CA264_13105 | | 3-dehydroquinate synthase | — | — |
| Bacteroides stercoris CC31F | 0.50 | HMPREF1181_RS14145 | | 3-isopropylmalate dehydratase large subunit | 0.24 | HMPREF1181_RS09265 | | 3-dehydroquinate synthase | low | > 56 |
| Parabacteroides merdae CL09T00C40 | 0.49 | HMPREF1078_RS16660 | | 3-isopropylmalate dehydratase large subunit | 0.22 | HMPREF1078_RS04395 | | 3-dehydroquinate synthase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.49 | Echvi_2059 | | 3-isopropylmalate dehydratase, large subunit | 0.23 | Echvi_0121 | | 3-dehydroquinate synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS15960 | | 3-isopropylmalate dehydratase large subunit | 0.39 | ABZR86_RS10480 | | 3-dehydroquinate synthase | low | > 74 |
| Lysobacter sp. OAE881 | 0.48 | ABIE51_RS17575 | | 3-isopropylmalate dehydratase large subunit | 0.42 | ABIE51_RS16100 | | 3-dehydroquinate synthase | — | — |
| Synechococcus elongatus PCC 7942 | 0.47 | Synpcc7942_1898 | leuC | isopropylmalate isomerase large subunit | 0.40 | Synpcc7942_0525 | aroB | 3-dehydroquinate synthase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_13585 | leuC | 3-isopropylmalate dehydratase large subunit | 0.41 | OKGIIK_11185 | aroB | 3-dehydroquinate synthase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.46 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | 0.38 | A4249_RS04175 | | 3-dehydroquinate synthase | — | — |
Not shown: 8 genomes with orthologs for BPHYT_RS33915 only; 0 genomes with orthologs for BPHYT_RS17885 only