Conservation of cofitness between BPHYT_RS06405 and BPHYT_RS17885 in Burkholderia phytofirmans PsJN

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06405 phosphoribosylamine--glycine ligase 1.0 BPHYT_RS17885 3-dehydroquinate synthase 0.80 18
Paraburkholderia graminis OAS925 0.98 ABIE53_001545 phosphoribosylamine--glycine ligase 0.96 ABIE53_003740 3-dehydroquinate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.96 H281DRAFT_05615 3-dehydroquinate synthase — —
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.89 QEN71_RS28035 3-dehydroquinate synthase 0.83 6
Ralstonia solanacearum GMI1000 0.78 RS_RS10995 phosphoribosylamine--glycine ligase 0.71 RS_RS14880 3-dehydroquinate synthase — —
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.71 ABZR87_RS02590 3-dehydroquinate synthase — —
Ralstonia solanacearum PSI07 0.77 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.71 RPSI07_RS10300 3-dehydroquinate synthase — —
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.72 RALBFv3_RS06935 3-dehydroquinate synthase — —
Ralstonia solanacearum UW163 0.76 UW163_RS10125 phosphoribosylamine--glycine ligase 0.72 UW163_RS06680 3-dehydroquinate synthase — —
Cupriavidus basilensis FW507-4G11 0.74 RR42_RS04730 phosphoribosylamine--glycine ligase 0.75 RR42_RS19005 3-dehydroquinate synthase — —
Dechlorosoma suillum PS 0.73 Dsui_1596 phosphoribosylamine--glycine ligase 0.57 Dsui_1095 3-dehydroquinate synthase — —
Variovorax sp. SCN45 0.72 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.61 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) low > 127
Variovorax sp. OAS795 0.70 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.63 ABID97_RS23255 3-dehydroquinate synthase — —
Acidovorax sp. GW101-3H11 0.68 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.56 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) — —
Castellaniella sp019104865 MT123 0.68 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.58 ABCV34_RS12705 3-dehydroquinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.60 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.51 OHPLBJKB_00314 3-dehydroquinate synthase low > 73
Escherichia fergusonii Becca 0.60 EFB2_04605 Phosphoribosylamine--glycine ligase 0.50 EFB2_00439 3-dehydroquinate synthase low > 86
Escherichia coli Nissle 1917 0.60 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.50 ECOLIN_RS19360 3-dehydroquinate synthase low > 55
Escherichia coli BL21 0.60 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.51 ECD_03241 3-dehydroquinate synthase 0.60 60
Pantoea sp. MT58 0.59 IAI47_18045 phosphoribosylamine--glycine ligase 0.50 IAI47_01895 3-dehydroquinate synthase — —
Escherichia coli ECRC62 0.59 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.51 BNILDI_02615 aroB 3-dehydroquinate synthase 0.78 49
Pseudomonas putida KT2440 0.59 PP_4823 Phosphoribosylamine--glycine ligase 0.58 PP_5078 3-dehydroquinate synthase — —
Escherichia coli ECOR27 0.59 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.51 NOLOHH_08905 aroB 3-dehydroquinate synthase 0.86 29
Escherichia coli ECRC98 0.59 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.50 JDDGAC_20745 aroB 3-dehydroquinate synthase low > 86
Escherichia coli ECOR38 0.59 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.50 HEPCGN_15935 aroB 3-dehydroquinate synthase low > 87
Escherichia coli ECRC101 0.59 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.50 MCAODC_07645 aroB 3-dehydroquinate synthase low > 87
Escherichia coli ECRC99 0.59 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.50 KEDOAH_11025 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC102 0.59 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.50 NIAGMN_14885 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC100 0.59 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.50 OKFHMN_17115 aroB 3-dehydroquinate synthase low > 80
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.48 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) low > 78
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.56 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) — —
Klebsiella michiganensis M5al 0.59 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.49 BWI76_RS26085 3-dehydroquinate synthase 0.55 86
Escherichia coli BW25113 0.59 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.50 b3389 aroB 3-dehydroquinate synthase (NCBI) 0.83 20
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pseudomonas sp. RS175 0.59 PFR28_05213 Phosphoribosylamine--glycine ligase 0.54 PFR28_05013 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_08230 phosphoribosylamine--glycine ligase 0.56 AO356_09385 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Enterobacter sp. TBS_079 0.58 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.49 MPMX20_04278 3-dehydroquinate synthase 0.80 55
Pseudomonas fluorescens SBW25 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas sp. S08-1 0.58 OH686_07625 Phosphoribosylamine--glycine ligase 0.57 OH686_10015 3-dehydroquinate synthase — —
Erwinia tracheiphila SCR3 0.58 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.48 LU632_RS22865 aroB 3-dehydroquinate synthase low > 74
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_01415 phosphoribosylamine--glycine ligase 0.50 CSW01_13300 3-dehydroquinate synthase low > 62
Acinetobacter radioresistens SK82 0.58 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.55 MPMX26_02810 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.54 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_13645 phosphoribosylamine--glycine ligase 0.55 AO353_12505 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.54 Psyr_0409 3-dehydroquinate synthase — —
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) 0.65 62
Dickeya dadantii 3937 0.58 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.49 DDA3937_RS19545 3-dehydroquinate synthase — —
Pseudomonas stutzeri RCH2 0.58 Psest_1013 phosphoribosylamine--glycine ligase 0.54 Psest_3713 3-dehydroquinate synthase — —
Marinobacter adhaerens HP15 0.58 HP15_3228 phosphoribosylamine-glycine ligase 0.55 HP15_480 3-dehydroquinate synthase — —
Pseudomonas simiae WCS417 0.57 PS417_02935 phosphoribosylamine--glycine ligase 0.57 PS417_01985 3-dehydroquinate synthase — —
Dickeya dianthicola ME23 0.57 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.48 DZA65_RS20760 3-dehydroquinate synthase — —
Dickeya dianthicola 67-19 0.57 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.48 HGI48_RS19675 3-dehydroquinate synthase — —
Rahnella sp. WP5 0.57 EX31_RS16855 phosphoribosylamine--glycine ligase 0.51 EX31_RS04720 3-dehydroquinate synthase — —
Lysobacter sp. OAE881 0.57 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.42 ABIE51_RS16100 3-dehydroquinate synthase — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS20340 phosphoribosylamine--glycine ligase 0.48 HER17_RS01780 3-dehydroquinate synthase 0.91 37
Alteromonas macleodii MIT1002 0.56 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.53 MIT1002_00447 3-dehydroquinate synthase — —
Serratia liquefaciens MT49 0.56 IAI46_01360 phosphoribosylamine--glycine ligase 0.49 IAI46_23700 3-dehydroquinate synthase low > 86
Shewanella amazonensis SB2B 0.56 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.55 Sama_3367 3-dehydroquinate synthase (RefSeq) low > 62
Shewanella sp. ANA-3 0.55 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) 0.89 22
Shewanella oneidensis MR-1 0.54 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.53 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.53 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.39 ABZR86_RS10480 3-dehydroquinate synthase 0.85 74
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.41 OKGIIK_11185 aroB 3-dehydroquinate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.41 LRK54_RS04310 3-dehydroquinate synthase — —
Rhodanobacter denitrificans MT42 0.51 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.41 LRK55_RS04085 3-dehydroquinate synthase — —
Agrobacterium fabrum C58 0.48 Atu0647 phosphoribosylamine--glycine ligase 0.36 Atu3625 3-dehydroquinate synthase — —
Rhizobium sp. OAE497 0.47 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.38 ABIE40_RS17670 3-dehydroquinate synthase — —
Azospirillum sp. SherDot2 0.47 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.39 MPMX19_02639 3-dehydroquinate synthase — —
Rhodopseudomonas palustris CGA009 0.46 TX73_005965 phosphoribosylamine--glycine ligase 0.37 TX73_002610 3-dehydroquinate synthase — —
Azospirillum brasilense Sp245 0.46 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.38 AZOBR_RS03220 3-dehydroquinate synthase — —
Sinorhizobium meliloti 1021 0.45 SMc00993 phosphoribosylamine--glycine ligase 0.38 SMc00696 3-dehydroquinate synthase — —
Magnetospirillum magneticum AMB-1 0.44 AMB_RS01075 phosphoribosylamine--glycine ligase 0.40 AMB_RS19865 3-dehydroquinate synthase — —
Rhodospirillum rubrum S1H 0.43 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) — —
Phaeobacter inhibens DSM 17395 0.43 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.37 PGA1_c14100 3-dehydroquinate synthase AroB — —
Caulobacter crescentus NA1000 0.42 CCNA_00299 phosphoribosylamine--glycine ligase 0.40 CCNA_03104 3-dehydroquinate synthase 0.75 52
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_00299 phosphoribosylamine--glycine ligase 0.40 CCNA_03104 3-dehydroquinate synthase low > 67
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase 0.24 HMPREF1181_RS09265 3-dehydroquinate synthase low > 56
Dinoroseobacter shibae DFL-12 0.42 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) — —
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_0167 phosphoribosylamine--glycine ligase 0.23 Echvi_0121 3-dehydroquinate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_20115 phosphoribosylamine--glycine ligase 0.24 CA264_13105 3-dehydroquinate synthase — —
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase 0.22 HMPREF1078_RS04395 3-dehydroquinate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS09255 phosphoribosylamine--glycine ligase 0.38 A4249_RS04175 3-dehydroquinate synthase — —
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS01620 phosphoribosylamine--glycine ligase 0.27 ABZR88_RS05215 3-dehydroquinate synthase — —
Mycobacterium tuberculosis H37Rv 0.32 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.30 Rv2538c 3-dehydroquinate synthase AroB — —

Not shown: 13 genomes with orthologs for BPHYT_RS06405 only; 0 genomes with orthologs for BPHYT_RS17885 only