Conservation of cofitness between BPHYT_RS02610 and BPHYT_RS17885 in Burkholderia phytofirmans PsJN

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 1.0 BPHYT_RS17885 3-dehydroquinate synthase 0.80 5
Paraburkholderia bryophila 376MFSha3.1 0.95 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.96 H281DRAFT_05615 3-dehydroquinate synthase — —
Paraburkholderia graminis OAS925 0.92 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.96 ABIE53_003740 3-dehydroquinate synthase — —
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.89 QEN71_RS28035 3-dehydroquinate synthase 0.68 61
Ralstonia solanacearum GMI1000 0.62 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.71 RS_RS14880 3-dehydroquinate synthase — —
Ralstonia solanacearum UW163 0.60 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.72 UW163_RS06680 3-dehydroquinate synthase — —
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.72 RALBFv3_RS06935 3-dehydroquinate synthase — —
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.71 ABZR87_RS02590 3-dehydroquinate synthase 0.57 52
Ralstonia solanacearum PSI07 0.58 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.71 RPSI07_RS10300 3-dehydroquinate synthase — —
Castellaniella sp019104865 MT123 0.56 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.58 ABCV34_RS12705 3-dehydroquinate synthase — —
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.75 RR42_RS19005 3-dehydroquinate synthase 0.79 16
Variovorax sp. SCN45 0.50 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.61 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) low > 127
Variovorax sp. OAS795 0.49 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.63 ABID97_RS23255 3-dehydroquinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.60 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) low > 90
Acidovorax sp. GW101-3H11 0.46 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.56 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) 0.66 36
Dechlorosoma suillum PS 0.43 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.57 Dsui_1095 3-dehydroquinate synthase — —
Lysobacter sp. OAE881 0.42 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.42 ABIE51_RS16100 3-dehydroquinate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) low > 74
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) — —
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.41 OKGIIK_11185 aroB 3-dehydroquinate synthase — —
Shewanella loihica PV-4 0.39 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.41 LRK55_RS04085 3-dehydroquinate synthase — —
Shewanella sp. ANA-3 0.38 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.39 ABZR86_RS10480 3-dehydroquinate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.41 LRK54_RS04310 3-dehydroquinate synthase — —
Shewanella amazonensis SB2B 0.38 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.55 Sama_3367 3-dehydroquinate synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.38 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.53 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.38 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.53 MIT1002_00447 3-dehydroquinate synthase — —
Rhodospirillum rubrum S1H 0.37 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) — —
Azospirillum sp. SherDot2 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.39 MPMX19_02639 3-dehydroquinate synthase — —
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pectobacterium carotovorum WPP14 0.36 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 HER17_RS01780 3-dehydroquinate synthase low > 75
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.38 AZOBR_RS03220 3-dehydroquinate synthase — —
Serratia liquefaciens MT49 0.36 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 IAI46_23700 3-dehydroquinate synthase low > 86
Rahnella sp. WP5 0.36 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 EX31_RS04720 3-dehydroquinate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.51 OHPLBJKB_00314 3-dehydroquinate synthase — —
Escherichia coli ECRC102 0.36 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 NIAGMN_14885 aroB 3-dehydroquinate synthase — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 ECOLIN_RS19360 3-dehydroquinate synthase — —
Dickeya dadantii 3937 0.36 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 DDA3937_RS19545 3-dehydroquinate synthase — —
Escherichia coli BL21 0.36 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.51 ECD_03241 3-dehydroquinate synthase — —
Escherichia coli ECRC101 0.36 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 MCAODC_07645 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC62 0.36 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 BNILDI_02615 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC99 0.36 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 KEDOAH_11025 aroB 3-dehydroquinate synthase — —
Escherichia fergusonii Becca 0.36 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.50 EFB2_00439 3-dehydroquinate synthase — —
Escherichia coli BW25113 0.36 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.50 b3389 aroB 3-dehydroquinate synthase (NCBI) — —
Escherichia coli ECRC100 0.36 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 OKFHMN_17115 aroB 3-dehydroquinate synthase — —
Escherichia coli ECOR27 0.36 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 NOLOHH_08905 aroB 3-dehydroquinate synthase — —
Enterobacter sp. TBS_079 0.36 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.49 MPMX20_04278 3-dehydroquinate synthase — —
Escherichia coli ECOR38 0.36 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 HEPCGN_15935 aroB 3-dehydroquinate synthase — —
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) — —
Escherichia coli ECRC98 0.36 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 JDDGAC_20745 aroB 3-dehydroquinate synthase — —
Klebsiella michiganensis M5al 0.36 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.49 BWI76_RS26085 3-dehydroquinate synthase — —
Dickeya dianthicola 67-19 0.35 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 HGI48_RS19675 3-dehydroquinate synthase — —
Mycobacterium tuberculosis H37Rv 0.35 Rv0564c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.30 Rv2538c 3-dehydroquinate synthase AroB — —
Dickeya dianthicola ME23 0.35 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 DZA65_RS20760 3-dehydroquinate synthase — —
Caulobacter crescentus NA1000 0.35 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.40 CCNA_03104 3-dehydroquinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.40 CCNA_03104 3-dehydroquinate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.48 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) — —
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.50 CSW01_13300 3-dehydroquinate synthase — —
Pantoea sp. MT58 0.35 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 IAI47_01895 3-dehydroquinate synthase — —
Erwinia tracheiphila SCR3 0.34 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 LU632_RS22865 aroB 3-dehydroquinate synthase 0.60 33
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS15450 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.38 A4249_RS04175 3-dehydroquinate synthase — —
Acinetobacter radioresistens SK82 0.32 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.55 MPMX26_02810 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.54 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.54 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) 0.69 59
Pseudomonas stutzeri RCH2 0.31 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.54 Psest_3713 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_01735 glycerol-3-phosphate dehydrogenase 0.55 AO353_12505 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25 0.31 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas simiae WCS417 0.30 PS417_09000 glycerol-3-phosphate dehydrogenase 0.57 PS417_01985 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_19795 glycerol-3-phosphate dehydrogenase 0.56 AO356_09385 3-dehydroquinate synthase — —
Pseudomonas sp. RS175 0.30 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.54 PFR28_05013 3-dehydroquinate synthase — —
Marinobacter adhaerens HP15 0.30 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 HP15_480 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.56 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_3830 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (RefSeq) 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) — —
Agrobacterium fabrum C58 0.29 Atu2650 glycerol-3-phosphate dehydrogenase 0.36 Atu3625 3-dehydroquinate synthase — —
Pseudomonas putida KT2440 0.29 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.58 PP_5078 3-dehydroquinate synthase — —
Rhizobium sp. OAE497 0.29 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.38 ABIE40_RS17670 3-dehydroquinate synthase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.37 PGA1_c14100 3-dehydroquinate synthase AroB — —
Pseudomonas sp. S08-1 0.28 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.57 OH686_10015 3-dehydroquinate synthase — —
Sinorhizobium meliloti 1021 0.28 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.38 SMc00696 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) — —
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase — —
Rhodopseudomonas palustris CGA009 0.26 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.37 TX73_002610 3-dehydroquinate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_0322 Glycerol-3-phosphate dehydrogenase 0.23 Echvi_0121 3-dehydroquinate synthase — —
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS08570 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.24 HMPREF1181_RS09265 3-dehydroquinate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_05630 glycerol-3-phosphate dehydrogenase 0.24 CA264_13105 3-dehydroquinate synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS01515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.27 ABZR88_RS05215 3-dehydroquinate synthase — —
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS10070 glycerol-3-phosphate dehydrogenase 0.22 HMPREF1078_RS04395 3-dehydroquinate synthase — —

Not shown: 10 genomes with orthologs for BPHYT_RS02610 only; 1 genomes with orthologs for BPHYT_RS17885 only