Conservation of cofitness between BPHYT_RS06405 and BPHYT_RS16840 in Burkholderia phytofirmans PsJN

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06405 phosphoribosylamine--glycine ligase 1.0 BPHYT_RS16840 transketolase 0.82 13
Paraburkholderia graminis OAS925 0.98 ABIE53_001545 phosphoribosylamine--glycine ligase 0.95 ABIE53_003537 transketolase — —
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.95 H281DRAFT_06314 transketolase — —
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.90 QEN71_RS27010 transketolase — —
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS17755 phosphoribosylamine--glycine ligase 0.71 HSERO_RS07115 transketolase — —
Ralstonia solanacearum GMI1000 0.78 RS_RS10995 phosphoribosylamine--glycine ligase 0.68 RS_RS13760 transketolase — —
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.69 ABZR87_RS01440 transketolase — —
Ralstonia solanacearum PSI07 0.77 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.68 RPSI07_RS11430 transketolase — —
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.68 RALBFv3_RS05870 transketolase — —
Ralstonia solanacearum UW163 0.76 UW163_RS10125 phosphoribosylamine--glycine ligase 0.68 UW163_RS07755 transketolase — —
Cupriavidus basilensis FW507-4G11 0.74 RR42_RS04730 phosphoribosylamine--glycine ligase 0.69 RR42_RS17575 transketolase — —
Dechlorosoma suillum PS 0.73 Dsui_1596 phosphoribosylamine--glycine ligase 0.63 Dsui_1561 transketolase — —
Variovorax sp. SCN45 0.72 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.60 GFF7176 Transketolase (EC 2.2.1.1) — —
Variovorax sp. OAS795 0.70 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.59 ABID97_RS02445 transketolase — —
Acidovorax sp. GW101-3H11 0.68 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.63 Ac3H11_649 Transketolase (EC 2.2.1.1) — —
Castellaniella sp019104865 MT123 0.68 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.66 ABCV34_RS15450 transketolase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.62 GFF2487 Transketolase (EC 2.2.1.1) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.65 OHPLBJKB_00781 Transketolase 1 — —
Escherichia coli BL21 0.60 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.65 ECD_02765 transketolase 1, thiamine triphosphate-binding low > 61
Escherichia fergusonii Becca 0.60 EFB2_04605 Phosphoribosylamine--glycine ligase 0.65 EFB2_00966 Transketolase 1 low > 86
Escherichia coli Nissle 1917 0.60 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.65 ECOLIN_RS16330 transketolase low > 55
Escherichia coli ECRC62 0.59 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.65 BNILDI_09775 tkt transketolase low > 75
Pantoea sp. MT58 0.59 IAI47_18045 phosphoribosylamine--glycine ligase 0.64 IAI47_03680 transketolase low > 76
Pseudomonas putida KT2440 0.59 PP_4823 Phosphoribosylamine--glycine ligase 0.63 PP_4965 transketolase A — —
Escherichia coli ECOR27 0.59 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.65 NOLOHH_11230 tkt transketolase low > 75
Escherichia coli ECRC99 0.59 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.65 KEDOAH_08815 tkt transketolase — —
Escherichia coli ECRC101 0.59 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.65 MCAODC_09845 tkt transketolase low > 87
Escherichia coli ECRC98 0.59 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.65 JDDGAC_22955 tkt transketolase low > 86
Escherichia coli ECRC100 0.59 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.65 OKFHMN_19325 tkt transketolase — —
Escherichia coli ECOR38 0.59 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.65 HEPCGN_18630 tkt transketolase low > 87
Escherichia coli ECRC102 0.59 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.65 NIAGMN_17090 tkt transketolase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.64 GFF3028 Transketolase (EC 2.2.1.1) low > 78
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.62 B158DRAFT_0510 transketolase, bacterial and yeast — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.62 Pf6N2E2_4655 Transketolase (EC 2.2.1.1) — —
Escherichia coli BW25113 0.59 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.65 b2935 tktA transketolase 1, thiamin-binding (NCBI) low > 76
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.62 Pf1N1B4_2397 Transketolase (EC 2.2.1.1) — —
Klebsiella michiganensis M5al 0.59 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.64 BWI76_RS24015 transketolase — —
Pseudomonas sp. RS175 0.59 PFR28_05213 Phosphoribosylamine--glycine ligase 0.62 PFR28_04188 Transketolase 1 — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_08230 phosphoribosylamine--glycine ligase 0.62 AO356_13680 transketolase — —
Enterobacter sp. TBS_079 0.58 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.64 MPMX20_03780 Transketolase 1 low > 85
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.63 PFLU_RS28095 transketolase — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.63 PFLU_RS28095 transketolase — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_01415 phosphoribosylamine--glycine ligase 0.65 CSW01_17330 transketolase low > 62
Erwinia tracheiphila SCR3 0.58 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.63 LU632_RS05520 tkt transketolase low > 74
Acinetobacter radioresistens SK82 0.58 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.60 MPMX26_01775 Transketolase 1 — —
Pseudomonas sp. S08-1 0.58 OH686_07625 Phosphoribosylamine--glycine ligase 0.63 OH686_10770 transketolase — —
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.59 PfGW456L13_1064 Transketolase (EC 2.2.1.1) — —
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.63 Psyr_4792 transketolase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.63 Psyr_4792 transketolase — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_13645 phosphoribosylamine--glycine ligase 0.62 AO353_07955 transketolase — —
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.63 EX28DRAFT_2974 transketolase, bacterial and yeast low > 76
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.59 Xcc-8004.1180.1 Transketolase (EC 2.2.1.1) — —
Dickeya dadantii 3937 0.58 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.64 DDA3937_RS18525 transketolase — —
Pseudomonas stutzeri RCH2 0.58 Psest_1013 phosphoribosylamine--glycine ligase 0.65 Psest_0328 transketolase, bacterial and yeast — —
Marinobacter adhaerens HP15 0.58 HP15_3228 phosphoribosylamine-glycine ligase 0.61 HP15_2913 bacterial transketolase — —
Dickeya dianthicola ME23 0.57 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.63 DZA65_RS19585 transketolase — —
Pseudomonas simiae WCS417 0.57 PS417_02935 phosphoribosylamine--glycine ligase 0.62 PS417_26440 transketolase — —
Dickeya dianthicola 67-19 0.57 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.63 HGI48_RS18450 transketolase — —
Rahnella sp. WP5 0.57 EX31_RS16855 phosphoribosylamine--glycine ligase 0.63 EX31_RS20285 transketolase low > 89
Lysobacter sp. OAE881 0.57 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.61 ABIE51_RS17120 transketolase — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS20340 phosphoribosylamine--glycine ligase 0.63 HER17_RS02680 transketolase low > 75
Alteromonas macleodii MIT1002 0.56 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.64 MIT1002_00861 Transketolase 1 — —
Serratia liquefaciens MT49 0.56 IAI46_01360 phosphoribosylamine--glycine ligase 0.63 IAI46_21045 transketolase — —
Shewanella amazonensis SB2B 0.56 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.63 Sama_2759 transketolase (RefSeq) — —
Shewanella sp. ANA-3 0.55 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.64 Shewana3_3353 transketolase (RefSeq) — —
Shewanella oneidensis MR-1 0.54 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.64 SO0930 tkt transketolase (NCBI ptt file) — —
Shewanella loihica PV-4 0.53 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.64 Shew_0752 transketolase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.61 ABZR86_RS18655 transketolase low > 74
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.60 OKGIIK_01095 tkt transketolase low > 52
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.62 LRK54_RS05750 transketolase — —
Rhodanobacter denitrificans MT42 0.51 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.61 LRK55_RS05505 transketolase low > 63
Agrobacterium fabrum C58 0.48 Atu0647 phosphoribosylamine--glycine ligase 0.44 Atu3736 transketolase — —
Rhizobium sp. OAE497 0.47 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.44 ABIE40_RS15865 transketolase — —
Azospirillum sp. SherDot2 0.47 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.58 MPMX19_02942 Transketolase 1 low > 112
Rhodopseudomonas palustris CGA009 0.46 TX73_005965 phosphoribosylamine--glycine ligase 0.48 TX73_024110 transketolase — —
Azospirillum brasilense Sp245 0.46 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.47 AZOBR_RS09010 transketolase — —
Sinorhizobium meliloti 1021 0.45 SMc00993 phosphoribosylamine--glycine ligase 0.51 SMc02342 transketolase low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) 0.57 DVU2530 tkt transketolase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.44 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) 0.57 DvMF_0976 transketolase (RefSeq) — —
Rhodospirillum rubrum S1H 0.43 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.54 Rru_A2405 transketolase (NCBI) — —
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase 0.28 HMPREF1181_RS04450 transketolase — —
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase 0.47 Synpcc7942_0538 tktA transketolase — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_01348 phosphoribosylamine--glycine ligase 0.29 BACOVA_01706 Transketolase, thiamine diphosphate binding domain protein — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) 0.30 BT0347 transketolase (NCBI ptt file) — —
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase 0.27 HMPREF1078_RS08725 transketolase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS09255 phosphoribosylamine--glycine ligase 0.43 A4249_RS00780 transketolase — —
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.46 Ga0059261_0731 transketolase, bacterial and yeast — —

Not shown: 17 genomes with orthologs for BPHYT_RS06405 only; 0 genomes with orthologs for BPHYT_RS16840 only