Conservation of cofitness between BPHYT_RS17380 and BPHYT_RS15915 in Burkholderia phytofirmans PsJN

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17380 ribulose-phosphate 3-epimerase 1.0 BPHYT_RS15915 ornithine carbamoyltransferase 0.74 3
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_05717 ribulose-5-phosphate 3-epimerase 0.97 H281DRAFT_04119 ornithine carbamoyltransferase low > 103
Paraburkholderia graminis OAS925 0.96 ABIE53_003638 ribulose-phosphate 3-epimerase 0.97 ABIE53_003354 ornithine carbamoyltransferase — —
Paraburkholderia sabiae LMG 24235 0.91 QEN71_RS27540 ribulose-phosphate 3-epimerase 0.96 QEN71_RS02785 ornithine carbamoyltransferase — —
Cupriavidus basilensis FW507-4G11 0.80 RR42_RS18285 ribulose-phosphate 3-epimerase 0.77 RR42_RS17175 ornithine carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS06475 ribulose-phosphate 3-epimerase 0.79 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Ralstonia solanacearum UW163 0.77 UW163_RS07150 ribulose-phosphate 3-epimerase 0.79 UW163_RS08440 ornithine carbamoyltransferase — —
Herbaspirillum seropedicae SmR1 0.77 HSERO_RS19425 ribulose-phosphate 3-epimerase 0.72 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) — —
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS02130 ribulose-phosphate 3-epimerase 0.79 ABZR87_RS00840 ornithine carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.77 RPSI07_RS10765 ribulose-phosphate 3-epimerase 0.80 RPSI07_RS12115 ornithine carbamoyltransferase — —
Ralstonia solanacearum GMI1000 0.77 RS_RS14420 ribulose-phosphate 3-epimerase 0.79 RS_RS12805 ornithine carbamoyltransferase — —
Dechlorosoma suillum PS 0.75 Dsui_0221 ribulose-phosphate 3-epimerase 0.71 Dsui_3249 ornithine carbamoyltransferase — —
Shewanella oneidensis MR-1 0.71 SO0292 rpe ribulose-phosphate 3-epimerase (NCBI ptt file) 0.30 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.71 Shewana3_3888 ribulose-5-phosphate 3-epimerase (RefSeq) 0.31 Shewana3_3903 ornithine carbamoyltransferase (RefSeq) — —
Shewanella loihica PV-4 0.70 Shew_0219 ribulose-phosphate 3-epimerase (RefSeq) 0.33 Shew_0204 ornithine carbamoyltransferase (RefSeq) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4611 ribulose-5-phosphate 3-epimerase 0.50 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4611 ribulose-5-phosphate 3-epimerase 0.50 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas stutzeri RCH2 0.69 Psest_3652 ribulose-phosphate 3-epimerase 0.50 Psest_1291 ornithine carbamoyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS12200 ribulose-phosphate 3-epimerase 0.22 ABZR86_RS08730 N-acetylornithine carbamoyltransferase low > 74
Pseudomonas sp. RS175 0.69 PFR28_04049 Ribulose-phosphate 3-epimerase 0.50 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic — —
Pseudomonas fluorescens SBW25 0.69 PFLU_RS27390 ribulose-phosphate 3-epimerase 0.51 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS27390 ribulose-phosphate 3-epimerase 0.51 PFLU_RS05680 ornithine carbamoyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.69 GFF2197 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.68 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Pseudomonas simiae WCS417 0.69 PS417_25735 ribulose-phosphate 3-epimerase 0.51 PS417_05595 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2543 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.51 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Pseudomonas putida KT2440 0.69 PP_0415 ribulose-5-phosphate 3-epimerase 0.49 PP_1079 Ornithine carbamoyltransferase — —
Lysobacter sp. OAE881 0.69 ABIE51_RS04135 ribulose-phosphate 3-epimerase 0.21 ABIE51_RS13410 N-acetylornithine carbamoyltransferase — —
Castellaniella sp019104865 MT123 0.68 ABCV34_RS10270 ribulose-phosphate 3-epimerase 0.71 ABCV34_RS05380 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_14410 ribulose phosphate epimerase 0.50 AO356_18275 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4820 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.50 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Kangiella aquimarina DSM 16071 0.68 B158DRAFT_0267 ribulose-phosphate 3-epimerase 0.19 B158DRAFT_1975 Ornithine carbamoyltransferase — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1215 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.50 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_07240 ribulose phosphate epimerase 0.51 AO353_04155 ornithine carbamoyltransferase — —
Pseudomonas sp. S08-1 0.68 OH686_15115 ribulose-phosphate 3-epimerase 0.49 OH686_20405 ornithine carbamoyltransferase — —
Marinobacter adhaerens HP15 0.66 HP15_3286 ribulose-phosphate 3-epimerase-like protein 0.52 HP15_750 ornithine carbamoyltransferase — —
Azospirillum sp. SherDot2 0.65 MPMX19_02946 Ribulose-phosphate 3-epimerase 0.42 MPMX19_02178 Ornithine carbamoyltransferase, anabolic — —
Variovorax sp. OAS795 0.65 ABID97_RS04905 ribulose-phosphate 3-epimerase 0.73 ABID97_RS08630 ornithine carbamoyltransferase — —
Variovorax sp. SCN45 0.65 GFF6246 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.71 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.605.1 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.21 Xcc-8004.2316.1 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) — —
Acinetobacter radioresistens SK82 0.64 MPMX26_02569 Ribulose-phosphate 3-epimerase 0.56 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS11120 ribulose-phosphate 3-epimerase 0.22 LRK55_RS02170 N-acetylornithine carbamoyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS11390 ribulose-phosphate 3-epimerase 0.22 LRK54_RS02415 N-acetylornithine carbamoyltransferase — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_12435 rpe ribulose-phosphate 3-epimerase 0.21 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase — —
Acidovorax sp. GW101-3H11 0.62 Ac3H11_757 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.71 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Rhodospirillum rubrum S1H 0.57 Rru_A2402 Ribulose-phosphate 3-epimerase (NCBI) 0.45 Rru_A3276 Ornithine carbamoyltransferase (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2240 ribulose-phosphate 3-epimerase 0.39 Ga0059261_3206 ornithine carbamoyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS13160 ribulose-phosphate 3-epimerase 0.46 A4249_RS11920 ornithine carbamoyltransferase — —
Synechococcus elongatus PCC 7942 0.51 Synpcc7942_0604 rpe ribulose-phosphate 3-epimerase 0.39 Synpcc7942_2514 argF ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00100 Ribulose-5-phosphate 3-epimerase 0.43 CCNA_02325 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 0.50 CCNA_00100 Ribulose-5-phosphate 3-epimerase 0.43 CCNA_02325 ornithine carbamoyltransferase — —
Magnetospirillum magneticum AMB-1 0.50 AMB_RS06980 ribulose-phosphate 3-epimerase 0.43 AMB_RS01610 ornithine carbamoyltransferase — —
Rhizobium sp. OAE497 0.46 ABIE40_RS10105 ribulose-phosphate 3-epimerase 0.42 ABIE40_RS02325 ornithine carbamoyltransferase — —
Sinorhizobium meliloti 1021 0.46 SMc00511 D-ribulose-5-phosphate 3-epimerase 0.43 SMc02137 ornithine carbamoyltransferase low > 103
Agrobacterium fabrum C58 0.46 Atu1839 ribulose-phosphate 3-epimerase 0.43 Atu0429 ornithine carbamoyltransferase — —
Azospirillum brasilense Sp245 0.45 AZOBR_RS06755 ribulose-phosphate 3-epimerase 0.43 AZOBR_RS19030 ornithine carbamoyltransferase — —
Dinoroseobacter shibae DFL-12 0.45 Dshi_3006 Ribulose-phosphate 3-epimerase (RefSeq) 0.43 Dshi_0796 ornithine carbamoyltransferase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU2531 rpe ribulose-phosphate 3-epimerase (TIGR) 0.44 DVU1096 argF ornithine carbamoyltransferase (TIGR) — —
Rhodopseudomonas palustris CGA009 0.44 TX73_019755 ribulose-phosphate 3-epimerase 0.46 TX73_024805 ornithine carbamoyltransferase — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c04170 ribulose-phosphate 3-epimerase Rpe 0.42 PGA1_c24220 ornithine carbamoyltransferase ArgF — —
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS08990 ribulose-phosphate 3-epimerase 0.15 CA265_RS18520 acetylornithine carbamoyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_21180 ribulose-phosphate 3-epimerase 0.15 CA264_06240 acetylornithine carbamoyltransferase low > 74
Mycobacterium tuberculosis H37Rv 0.39 Rv1408 Probable ribulose-phosphate 3-epimerase Rpe (PPE) (R5P3E) (pentose-5-phosphate 3-epimerase) 0.38 Rv1656 Probable ornithine carbamoyltransferase, anabolic ArgF — —
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_0977 Ribulose-phosphate 3-epimerase (RefSeq) 0.43 DvMF_0046 ornithine carbamoyltransferase (RefSeq) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS06500 ribulose-phosphate 3-epimerase 0.15 ABZR88_RS15495 acetylornithine carbamoyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_3575 ribulose-phosphate 3-epimerase 0.16 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) 0.84 29
Bacteroides ovatus ATCC 8483 0.37 BACOVA_01203 ribulose-phosphate 3-epimerase 0.15 BACOVA_03533 N-acetylornithine carbamoyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.37 BT3946 ribulose-phosphate 3-epimerase (NCBI ptt file) 0.14 BT3717 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) — —
Parabacteroides merdae CL09T00C40 0.37 HMPREF1078_RS00800 ribulose-phosphate 3-epimerase 0.15 HMPREF1078_RS10660 acetylornithine carbamoyltransferase — —
Bifidobacterium breve UCC2003 0.36 BBR_RS15800 ribulose-phosphate 3-epimerase 0.42 BBR_RS13905 ornithine carbamoyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS07710 ribulose-phosphate 3-epimerase 0.15 HMPREF1058_RS08640 acetylornithine carbamoyltransferase — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS06505 ribulose-phosphate 3-epimerase 0.15 HMPREF1181_RS03315 N-acetylornithine carbamoyltransferase low > 56
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS00225 ribulose-phosphate 3-epimerase 0.15 ABI39_RS02870 acetylornithine carbamoyltransferase — —

Not shown: 31 genomes with orthologs for BPHYT_RS17380 only; 1 genomes with orthologs for BPHYT_RS15915 only