Conservation of cofitness between BPHYT_RS13220 and BPHYT_RS06545 in Burkholderia phytofirmans PsJN

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13220 phosphomethylpyrimidine synthase 1.0 BPHYT_RS06545 acetolactate synthase 0.69 14
Paraburkholderia graminis OAS925 0.99 ABIE53_002857 phosphomethylpyrimidine synthase 0.99 ABIE53_001574 acetolactate synthase-1/2/3 large subunit
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.99 H281DRAFT_04551 acetolactate synthase, large subunit
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.97 QEN71_RS24225 acetolactate synthase 3 catalytic subunit 0.83 19
Herbaspirillum seropedicae SmR1 0.85 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.74 HSERO_RS08650 acetolactate synthase 0.36 38
Dechlorosoma suillum PS 0.85 Dsui_0422 thiamine biosynthesis protein ThiC 0.68 Dsui_3529 acetolactate synthase, large subunit, biosynthetic type
Castellaniella sp019104865 MT123 0.78 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.70 ABCV34_RS01210 acetolactate synthase 3 catalytic subunit 0.40 25
Marinobacter adhaerens HP15 0.75 HP15_453 thiamine biosynthesis protein thiC 0.59 HP15_531 acetolactate synthase, large subunit, biosynthetic type 0.75 24
Pseudomonas putida KT2440 0.75 PP_4922 Phosphomethylpyrimidine synthase 0.57 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.40 38
Pseudomonas sp. S08-1 0.74 OH686_15885 phosphomethylpyrimidine synthase 0.58 OH686_08130 acetolactate synthase, large subunit, biosynthetic type low > 80
Pseudomonas stutzeri RCH2 0.74 Psest_0477 thiamine biosynthesis protein ThiC 0.58 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.56 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.1066.1 hypothetical protein 0.35 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.58 61
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_08810 thiamine biosynthesis protein ThiC 0.56 AO356_16170 acetolactate synthase 3 catalytic subunit low > 104
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_13010 thiamine biosynthesis protein ThiC 0.57 AO353_14495 acetolactate synthase 3 catalytic subunit low > 101
Pseudomonas sp. RS175 0.74 PFR28_05091 Phosphomethylpyrimidine synthase 0.57 PFR28_03699 Acetolactate synthase isozyme 3 large subunit low > 88
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.57 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) low > 87
Pseudomonas fluorescens SBW25 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.57 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.57 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.56 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) low > 87
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.58 Psyr_0846 acetolactate synthase, large subunit 0.62 27
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.58 Psyr_0846 acetolactate synthase, large subunit low > 86
Pseudomonas simiae WCS417 0.73 PS417_02355 thiamine biosynthesis protein ThiC 0.57 PS417_23810 acetolactate synthase 3 catalytic subunit low > 88
Lysobacter sp. OAE881 0.73 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC 0.39 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.72 ABZR88_RS08840 phosphomethylpyrimidine synthase ThiC 0.37 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.72 CA264_20435 phosphomethylpyrimidine synthase ThiC 0.36 CA264_06930 acetolactate synthase, large subunit, biosynthetic type low > 74
Acinetobacter radioresistens SK82 0.71 MPMX26_00180 Phosphomethylpyrimidine synthase 0.56 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit low > 36
Pedobacter sp. GW460-11-11-14-LB5 0.71 CA265_RS20165 phosphomethylpyrimidine synthase ThiC 0.36 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.71 Echvi_3567 thiamine biosynthesis protein ThiC 0.38 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type low > 79
Ralstonia solanacearum PSI07 0.69 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.82 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type
Pectobacterium carotovorum WPP14 0.69 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.56 HER17_RS03095 acetolactate synthase 3 large subunit low > 75
Shewanella loihica PV-4 0.69 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.56 Shew_1776 acetolactate synthase 3 catalytic subunit (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.81 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit low > 80
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01290 thiamine biosynthesis protein ThiC 0.80 RR42_RS05435 acetolactate synthase 3 catalytic subunit
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.82 RALBFv3_RS03050 acetolactate synthase 3 large subunit
Ralstonia solanacearum UW163 0.68 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.82 UW163_RS10675 acetolactate synthase 3 large subunit
Shewanella amazonensis SB2B 0.68 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.56 Sama_2018 acetolactate synthase 3 catalytic subunit (RefSeq) low > 62
Rahnella sp. WP5 0.68 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.55 EX31_RS03665 acetolactate synthase 3 large subunit low > 89
Ralstonia solanacearum GMI1000 0.68 RS_RS00555 phosphomethylpyrimidine synthase 0.81 RS_RS10420 acetolactate synthase 3 large subunit
Enterobacter sp. TBS_079 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase 0.55 MPMX20_00771 Acetolactate synthase isozyme 3 large subunit low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4198 Thiamin biosynthesis protein ThiC 0.54 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Serratia liquefaciens MT49 0.67 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.56 IAI46_03375 acetolactate synthase 3 large subunit low > 86
Enterobacter asburiae PDN3 0.67 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.55 EX28DRAFT_3673 acetolactate synthase, large subunit (EC 2.2.1.6) low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.55 ECOLIN_RS00415 acetolactate synthase 3 large subunit low > 55
Escherichia fergusonii Becca 0.67 EFB2_04617 Phosphomethylpyrimidine synthase 0.55 EFB2_03969 Acetolactate synthase isozyme 3 large subunit low > 86
Escherichia coli ECOR27 0.67 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.55 NOLOHH_03045 ilvI acetolactate synthase 3 large subunit low > 75
Escherichia coli ECRC101 0.67 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.55 MCAODC_01215 ilvI acetolactate synthase 3 large subunit low > 87
Escherichia coli ECRC102 0.67 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.55 NIAGMN_08550 ilvI acetolactate synthase 3 large subunit
Escherichia coli BW25113 0.67 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.55 b0077 ilvI acetolactate synthase III large subunit (NCBI) 0.53 21
Escherichia coli ECRC98 0.67 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.55 JDDGAC_14295 ilvI acetolactate synthase 3 large subunit low > 86
Escherichia coli ECRC100 0.67 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.55 OKFHMN_10700 ilvI acetolactate synthase 3 large subunit low > 80
Escherichia coli ECRC99 0.67 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.55 KEDOAH_17455 ilvI acetolactate synthase 3 large subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.55 OHPLBJKB_03581 Acetolactate synthase isozyme 3 large subunit 0.46 9
Escherichia coli ECRC62 0.67 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.55 BNILDI_08565 ilvI acetolactate synthase 3 large subunit low > 75
Escherichia coli BL21 0.67 ECD_03871 phosphomethylpyrimidine synthase 0.55 ECD_00079 acetolactate synthase 3 large subunit low > 61
Escherichia coli ECOR38 0.67 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.55 HEPCGN_08680 ilvI acetolactate synthase 3 large subunit low > 87
Dickeya dadantii 3937 0.67 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.56 DDA3937_RS18105 acetolactate synthase 3 large subunit low > 74
Pantoea sp. MT58 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.55 IAI47_15990 acetolactate synthase 3 large subunit low > 76
Klebsiella michiganensis M5al 0.67 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.55 BWI76_RS04695 acetolactate synthase 3 large subunit low > 92
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.73 GFF1158 Acetolactate synthase large subunit (EC 2.2.1.6)
Erwinia tracheiphila SCR3 0.67 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.57 LU632_RS02885 ilvI acetolactate synthase 3 large subunit low > 74
Shewanella oneidensis MR-1 0.67 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.57 SO2279 ilvI acetolactate synthase III, large subunit (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00335 phosphomethylpyrimidine synthase 0.56 CSW01_12565 acetolactate synthase 3 large subunit low > 62
Alteromonas macleodii MIT1002 0.66 MIT1002_00097 Phosphomethylpyrimidine synthase 0.54 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit low > 70
Shewanella sp. ANA-3 0.66 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.57 Shewana3_2269 acetolactate synthase 3 catalytic subunit (RefSeq) low > 73
Dickeya dianthicola ME23 0.66 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.56 DZA65_RS19185 acetolactate synthase 3 large subunit low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.56 HGI48_RS18040 acetolactate synthase 3 large subunit 0.78 49
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.74 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6)
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.72 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) 0.78 34
Variovorax sp. OAS795 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.72 ABID97_RS14885 acetolactate synthase 3 catalytic subunit
Azospirillum brasilense Sp245 0.64 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.55 AZOBR_RS06560 acetolactate synthase low > 97
Magnetospirillum magneticum AMB-1 0.63 AMB_RS01125 phosphomethylpyrimidine synthase 0.54 AMB_RS17740 acetolactate synthase 3 large subunit
Sinorhizobium meliloti 1021 0.62 SM_b20615 thiamine biosynthesis protein ThiC 0.53 SMc01431 acetolactate synthase 3 catalytic subunit low > 103
Phaeobacter inhibens DSM 17395 0.62 PGA1_c09110 thiamine biosynthesis protein ThiC 0.49 PGA1_c20210 acetolactate synthase isozyme 3 large subunit low > 62
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_2424 hydroxymethylpyrimidine synthase 0.48 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6) 0.90 28
Dinoroseobacter shibae DFL-12 0.62 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) 0.50 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq)
Agrobacterium fabrum C58 0.62 Atu2569 thiamine biosynthesis protein 0.52 Atu2036 acetolactate synthase III, large subunit 0.59 75
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.55 CCNA_02185 acetolactate synthase large subunit low > 67
Caulobacter crescentus NA1000 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.55 CCNA_02185 acetolactate synthase large subunit 0.69 50
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS15715 phosphomethylpyrimidine synthase ThiC 0.36 A4249_RS10020 acetolactate synthase 2 catalytic subunit 0.88 27
Bosea sp. OAE506 0.60 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC 0.52 ABIE41_RS12890 acetolactate synthase 3 large subunit
Rhodopseudomonas palustris CGA009 0.60 TX73_018540 phosphomethylpyrimidine synthase ThiC 0.52 TX73_010465 acetolactate synthase 3 large subunit
Azospirillum sp. SherDot2 0.60 MPMX19_00336 Phosphomethylpyrimidine synthase 0.54 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit
Rhodospirillum rubrum S1H 0.57 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.53 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) low > 58
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS17760 phosphomethylpyrimidine synthase ThiC 0.36 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.59 31
Bacteroides stercoris CC31F 0.56 HMPREF1181_RS14685 phosphomethylpyrimidine synthase ThiC 0.37 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit low > 56
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS03280 phosphomethylpyrimidine synthase ThiC 0.36 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit 0.70 44
Bacteroides ovatus ATCC 8483 0.56 BACOVA_02358 thiamine biosynthesis protein ThiC 0.36 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.79 20
Bacteroides thetaiotaomicron VPI-5482 0.56 BT0650 thiamine biosynthesis protein ThiC (NCBI ptt file) 0.37 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.47 12
Parabacteroides merdae CL09T00C40 0.56 HMPREF1078_RS03485 phosphomethylpyrimidine synthase ThiC 0.37 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit low > 61
Mycobacterium tuberculosis H37Rv 0.51 Rv0423c Probable thiamine biosynthesis protein ThiC 0.44 Rv3003c Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase)

Not shown: 3 genomes with orthologs for BPHYT_RS13220 only; 7 genomes with orthologs for BPHYT_RS06545 only