| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS02150 | | biotin synthase | 1.0 | BPHYT_RS03495 | | hypothetical protein | 0.28 | 7 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.91 | H281DRAFT_02097 | | biotin synthase | 0.89 | H281DRAFT_04680 | | hypothetical protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.90 | ABIE53_000577 | | biotin synthase | 0.90 | ABIE53_000841 | | pyridoxal phosphate enzyme (YggS family) | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.85 | QEN71_RS01085 | | biotin synthase BioB | 0.84 | QEN71_RS26595 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS22850 | | biotin synthase BioB | 0.56 | RPSI07_RS11725 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.70 | RS_RS01305 | | biotin synthase | 0.57 | RS_RS13435 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 80 |
| Ralstonia solanacearum UW163 | 0.70 | UW163_RS03115 | | biotin synthase BioB | 0.57 | UW163_RS08050 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.70 | RALBFv3_RS10465 | | biotin synthase BioB | 0.57 | RALBFv3_RS05575 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.69 | ABZR87_RS06265 | | biotin synthase BioB | 0.62 | ABZR87_RS01225 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.67 | RR42_RS00940 | | biotin synthase | 0.57 | RR42_RS17355 | | hypothetical protein | low | > 128 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.60 | GFF3992 | | Biotin synthase (EC 2.8.1.6) | 0.53 | GFF2722 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 90 |
| Dyella japonica UNC79MFTsu3.2 | 0.59 | ABZR86_RS15840 | | biotin synthase BioB | 0.30 | ABZR86_RS09305 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Kangiella aquimarina DSM 16071 | 0.58 | B158DRAFT_0864 | | biotin synthase (EC 2.8.1.6) | 0.43 | B158DRAFT_0196 | | pyridoxal phosphate enzyme, YggS family | — | — |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_2272 | | Biotin synthase (EC 2.8.1.6) | 0.52 | Ac3H11_4474 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.57 | ABCV34_RS15280 | | biotin synthase BioB | 0.31 | ABCV34_RS02955 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 48 |
| Marinobacter adhaerens HP15 | 0.57 | HP15_2486 | | biotin synthase | 0.50 | HP15_288 | | alanine racemase domain protein | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.57 | CSW01_05645 | | biotin synthase | 0.52 | CSW01_02455 | | YggS family pyridoxal phosphate enzyme | low | > 62 |
| Pseudomonas putida KT2440 | 0.57 | PP_0362 | | Biotin synthase | 0.56 | PP_5094 | | putative enzyme with PLP binding domain | low | > 96 |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS12235 | | biotin synthase | 0.59 | HSERO_RS18995 | | hypothetical protein | 0.26 | 28 |
| Pseudomonas stutzeri RCH2 | 0.57 | Psest_0411 | | biotin synthetase | 0.54 | Psest_0284 | | pyridoxal phosphate enzyme, YggS family | low | > 67 |
| Pseudomonas sp. S08-1 | 0.57 | OH686_10355 | | biotin synthase | 0.58 | OH686_10975 | | Pyridoxal phosphate-containing protein YggS | low | > 80 |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_04445 | bioB | biotin synthase BioB | 0.53 | NIAGMN_17020 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_01379 | | Biotin synthase | 0.50 | MIT1002_03061 | | pyridoxal phosphate enzyme, YggS family | low | > 70 |
| Escherichia coli ECRC99 | 0.57 | KEDOAH_21510 | bioB | biotin synthase BioB | 0.53 | KEDOAH_08885 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia coli ECRC98 | 0.57 | JDDGAC_10035 | bioB | biotin synthase BioB | 0.53 | JDDGAC_22885 | yggS | pyridoxal phosphate homeostasis protein | low | > 86 |
| Escherichia coli ECRC101 | 0.57 | MCAODC_25615 | bioB | biotin synthase BioB | 0.53 | MCAODC_09775 | yggS | pyridoxal phosphate homeostasis protein | low | > 87 |
| Escherichia coli ECRC100 | 0.57 | OKFHMN_06400 | bioB | biotin synthase BioB | 0.53 | OKFHMN_19255 | yggS | pyridoxal phosphate homeostasis protein | low | > 80 |
| Escherichia coli BW25113 | 0.56 | b0775 | bioB | biotin synthase (NCBI) | 0.53 | b2951 | yggS | predicted enzyme (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.56 | ECD_00742 | | biotin synthase | 0.53 | ECD_02781 | | UPF0001 family protein, PLP-binding | low | > 61 |
| Enterobacter sp. TBS_079 | 0.56 | MPMX20_01403 | | Biotin synthase | 0.51 | MPMX20_03809 | | Pyridoxal phosphate homeostasis protein | low | > 85 |
| Escherichia coli ECRC62 | 0.56 | BNILDI_21040 | bioB | biotin synthase BioB | 0.53 | BNILDI_09705 | yggS | pyridoxal phosphate homeostasis protein | low | > 75 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_4687 | | biotin synthase | 0.56 | Psyr_0477 | | Protein of unknown function UPF0001 | low | > 86 |
| Escherichia coli ECOR38 | 0.56 | HEPCGN_01640 | bioB | biotin synthase BioB | 0.53 | HEPCGN_18560 | yggS | pyridoxal phosphate homeostasis protein | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS27650 | | biotin synthase BioB | 0.57 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 109 |
| Lysobacter sp. OAE881 | 0.56 | ABIE51_RS01140 | | biotin synthase BioB | 0.39 | ABIE51_RS16060 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 62 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.56 | OHPLBJKB_02938 | | Biotin synthase | 0.53 | OHPLBJKB_00765 | | Pyridoxal phosphate homeostasis protein | low | > 73 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS27650 | | biotin synthase BioB | 0.57 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 109 |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS08760 | | biotin synthase | 0.53 | BWI76_RS24100 | | YggS family pyridoxal phosphate enzyme | low | > 92 |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_4687 | | biotin synthase | 0.56 | Psyr_0477 | | Protein of unknown function UPF0001 | low | > 86 |
| Pantoea sp. MT58 | 0.56 | IAI47_13530 | | biotin synthase BioB | 0.52 | IAI47_03595 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
| Escherichia coli ECOR27 | 0.56 | NOLOHH_22770 | bioB | biotin synthase BioB | 0.53 | NOLOHH_11125 | yggS | pyridoxal phosphate homeostasis protein | low | > 75 |
| Escherichia fergusonii Becca | 0.56 | EFB2_03330 | | Biotin synthase | 0.53 | EFB2_00951 | | Pyridoxal phosphate homeostasis protein | low | > 86 |
| Variovorax sp. SCN45 | 0.56 | GFF937 | | Biotin synthase (EC 2.8.1.6) | 0.61 | GFF3744 | | Pyridoxal phosphate-containing protein YggS | — | — |
| Escherichia coli Nissle 1917 | 0.56 | ECOLIN_RS04130 | | biotin synthase BioB | 0.53 | ECOLIN_RS16415 | | pyridoxal phosphate homeostasis protein | low | > 55 |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_2216 | | biotin synthase (EC 2.8.1.6) | 0.52 | EX28DRAFT_2989 | | pyridoxal phosphate enzyme, YggS family | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.56 | Xcc-8004.505.1 | | Biotin synthase (EC 2.8.1.6) | 0.39 | Xcc-8004.1711.1 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.56 | GFF671 | | Biotin synthase (EC 2.8.1.6) | 0.55 | GFF3054 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 78 |
| Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_14135 | | biotin synthase | 0.55 | AO356_13425 | | hypothetical protein | low | > 104 |
| Shewanella amazonensis SB2B | 0.56 | Sama_1438 | | biotin synthase (RefSeq) | 0.49 | Sama_2477 | | hypothetical protein (RefSeq) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_4759 | | Biotin synthase (EC 2.8.1.6) | 0.54 | Pf6N2E2_4601 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 103 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_26005 | | biotin synthase | 0.57 | PS417_26725 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_07525 | | biotin synthase | 0.53 | AO353_08160 | | hypothetical protein | low | > 101 |
| Erwinia tracheiphila SCR3 | 0.56 | LU632_RS09130 | bioB | biotin synthase BioB | 0.50 | LU632_RS05460 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_2487 | | Biotin synthase (EC 2.8.1.6) | 0.55 | Pf1N1B4_2342 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | — | — |
| Pseudomonas sp. RS175 | 0.56 | PFR28_04103 | | Biotin synthase | 0.54 | PFR28_04242 | | Pyridoxal phosphate homeostasis protein | low | > 88 |
| Dechlorosoma suillum PS | 0.56 | Dsui_1297 | | biotin synthetase | 0.64 | Dsui_0603 | | pyridoxal phosphate enzyme, YggS family | low | > 51 |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_1147 | | Biotin synthase (EC 2.8.1.6) | 0.56 | PfGW456L13_1011 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 87 |
| Dickeya dadantii 3937 | 0.55 | DDA3937_RS08510 | | biotin synthase BioB | 0.53 | DDA3937_RS17300 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 74 |
| Serratia liquefaciens MT49 | 0.55 | IAI46_06525 | | biotin synthase BioB | 0.49 | IAI46_21410 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.55 | OKGIIK_13650 | bioB | biotin synthase BioB | 0.28 | OKGIIK_09885 | | Pyridoxal phosphate homeostasis protein | low | > 52 |
| Variovorax sp. OAS795 | 0.55 | ABID97_RS13955 | | biotin synthase BioB | 0.60 | ABID97_RS00250 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS08965 | | biotin synthase BioB | 0.53 | DZA65_RS18435 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 75 |
| Rhodanobacter denitrificans MT42 | 0.55 | LRK55_RS09900 | | biotin synthase BioB | 0.31 | LRK55_RS08955 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.55 | LRK54_RS10260 | | biotin synthase BioB | 0.30 | LRK54_RS02905 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 59 |
| Dickeya dianthicola 67-19 | 0.55 | HGI48_RS08675 | | biotin synthase BioB | 0.53 | HGI48_RS17345 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 71 |
| Rahnella sp. WP5 | 0.55 | EX31_RS23695 | | biotin synthase BioB | 0.51 | EX31_RS02685 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 89 |
| Shewanella oneidensis MR-1 | 0.55 | SO2740 | bioB | biotin synthase (NCBI ptt file) | 0.54 | SO3352 | | conserved hypothetical protein TIGR00044 (NCBI ptt file) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.55 | AMB_RS13865 | | biotin synthase | 0.32 | AMB_RS00120 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS13460 | | biotin synthase BioB | 0.54 | HER17_RS03810 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 75 |
| Shewanella loihica PV-4 | 0.55 | Shew_1719 | | biotin synthase (RefSeq) | 0.55 | Shew_1137 | | alanine racemase domain-containing protein (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_2519 | | biotin synthase (RefSeq) | 0.53 | Shewana3_1194 | | hypothetical protein (RefSeq) | low | > 73 |
| Sphingomonas koreensis DSMZ 15582 | 0.54 | Ga0059261_3989 | | biotin synthase (EC 2.8.1.6) | 0.27 | Ga0059261_2216 | | pyridoxal phosphate enzyme, YggS family | low | > 68 |
| Caulobacter crescentus NA1000 Δfur | 0.52 | CCNA_03636 | | biotin synthase | 0.27 | CCNA_03861 | | pyridoxal 5'-phosphate dependent enzyme class III | low | > 67 |
| Acinetobacter radioresistens SK82 | 0.52 | MPMX26_01785 | | Biotin synthase | 0.48 | MPMX26_02404 | | Pyridoxal phosphate homeostasis protein | low | > 36 |
| Caulobacter crescentus NA1000 | 0.52 | CCNA_03636 | | biotin synthase | 0.27 | CCNA_03861 | | pyridoxal 5'-phosphate dependent enzyme class III | low | > 66 |
| Agrobacterium fabrum C58 | 0.52 | Atu3997 | | biotin synthetase | 0.32 | Atu2747 | | hypothetical protein | 0.72 | 24 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_010535 | | biotin synthase BioB | 0.32 | TX73_014475 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.51 | PGA1_c09120 | | biotin synthase BioB | 0.28 | PGA1_c33360 | | putative alanine racemase | low | > 62 |
| Synechococcus elongatus PCC 7942 | 0.50 | Synpcc7942_0419 | bioB | biotin synthase | 0.27 | Synpcc7942_2060 | ylmE | hypothetical protein | — | — |
| Rhizobium sp. OAE497 | 0.49 | ABIE40_RS21075 | | biotin synthase BioB | 0.30 | ABIE40_RS19180 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.47 | CA264_02425 | | biotin synthase BioB | 0.28 | CA264_06410 | | YggS family pyridoxal phosphate enzyme | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.47 | Echvi_2566 | | biotin synthetase | 0.26 | Echvi_2233 | | pyridoxal phosphate enzyme, YggS family | low | > 79 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.44 | CA265_RS09475 | | biotin synthase BioB | 0.29 | CA265_RS06285 | | YggS family pyridoxal phosphate enzyme | low | > 88 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.42 | ABZR88_RS10190 | | biotin synthase BioB | 0.31 | ABZR88_RS11740 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 71 |
| Mycobacterium tuberculosis H37Rv | 0.24 | Rv1589 | | Probable biotin synthetase BioB | 0.23 | Rv2148c | | Conserved protein | low | > 58 |
| Fusobacterium nucleatum SB010 | 0.23 | HUW76_05115 | | biotin synthase BioB | 0.27 | HUW76_07280 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 35 |
| Parabacteroides merdae CL09T00C40 | 0.22 | HMPREF1078_RS15300 | | biotin synthase BioB | 0.29 | HMPREF1078_RS15965 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 61 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.22 | DVU2558 | bioB | biotin synthase (Dmitry Rodionov) | 0.32 | DVU0051 | | conserved hypothetical protein TIGR00044 (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.20 | DvMF_1001 | | biotin synthase (RefSeq) | 0.33 | DvMF_2208 | | alanine racemase domain protein (RefSeq) | low | > 51 |
Not shown: 2 genomes with orthologs for BPHYT_RS02150 only; 13 genomes with orthologs for BPHYT_RS03495 only