| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu4616 | | dTDP-4-dehydrorhamnose reductase | 1.0 | Atu4617 | | dTDP-D-glucose-4,6-dehydratase | 0.79 | 3 |
| Rhizobium sp. OAE497 | 0.57 | ABIE40_RS08665 | | dTDP-4-dehydrorhamnose reductase | 0.79 | ABIE40_RS08670 | | dTDP-glucose 4,6-dehydratase | low | > 107 |
| Rhodopseudomonas palustris CGA009 | 0.48 | TX73_000615 | | dTDP-4-dehydrorhamnose reductase | 0.18 | TX73_020345 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Bosea sp. OAE506 | 0.48 | ABIE41_RS02860 | | dTDP-4-dehydrorhamnose reductase | 0.65 | ABIE41_RS02850 | | dTDP-glucose 4,6-dehydratase | 0.65 | 2 |
| Shewanella sp. ANA-3 | 0.46 | Shewana3_1381 | | dTDP-4-dehydrorhamnose reductase (RefSeq) | 0.66 | Shewana3_1379 | | dTDP-glucose 4,6 dehydratase (RefSeq) | — | — |
| Sinorhizobium meliloti 1021 | 0.46 | SM_b21327 | | dTDP-4-dehydrorhamnose reductase | 0.57 | SM_b21326 | | dTDP-D-glucose 4,6-dehydratase | low | > 103 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_06726 | | dTDP-4-dehydrorhamnose reductase | 0.66 | MPMX19_06725 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Dickeya dadantii 3937 | 0.44 | DDA3937_RS06750 | | dTDP-4-dehydrorhamnose reductase | 0.68 | DDA3937_RS06735 | | dTDP-glucose 4,6-dehydratase | low | > 74 |
| Pseudomonas sp. S08-1 | 0.43 | OH686_14365 | | dTDP-4-dehydrorhamnose reductase | 0.65 | OH686_14380 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.43 | PFLU_RS01410 | | dTDP-4-dehydrorhamnose reductase | 0.66 | PFLU_RS01425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens SBW25 | 0.43 | PFLU_RS01410 | | dTDP-4-dehydrorhamnose reductase | 0.66 | PFLU_RS01425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Dickeya dianthicola ME23 | 0.43 | DZA65_RS07125 | | dTDP-4-dehydrorhamnose reductase | 0.68 | DZA65_RS07110 | | dTDP-glucose 4,6-dehydratase | low | > 75 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_01315 | | dTDP-4-dehydrorhamnose reductase | 0.67 | PS417_01330 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_1006 | | dTDP-4-dehydrorhamnose reductase | 0.67 | Psest_4262 | | dTDP-glucose 4,6-dehydratase | — | — |
| Shewanella loihica PV-4 | 0.42 | Shew_1403 | | dTDP-4-dehydrorhamnose reductase (RefSeq) | 0.66 | Shew_1401 | | dTDP-glucose 4,6 dehydratase (RefSeq) | 0.67 | 7 |
| Pseudomonas sp. RS175 | 0.42 | PFR28_04891 | | dTDP-4-dehydrorhamnose reductase | 0.65 | PFR28_04894 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Rhodospirillum rubrum S1H | 0.42 | Rru_B0049 | | dTDP-4-dehydrorhamnose reductase (NCBI) | 0.67 | Rru_B0050 | | dTDP-glucose 4,6-dehydratase (NCBI) | low | > 58 |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_2198 | | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.61 | PfGW456L13_2200 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS20610 | | dTDP-4-dehydrorhamnose reductase | 0.60 | RPSI07_RS20615 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum UW163 | 0.41 | UW163_RS00915 | | dTDP-4-dehydrorhamnose reductase | 0.60 | UW163_RS00920 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.41 | RALBFv3_RS12650 | | dTDP-4-dehydrorhamnose reductase | 0.60 | RALBFv3_RS12645 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_11870 | | dTDP-4-dehydrorhamnose reductase | 0.67 | AO353_11885 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum GMI1000 | 0.41 | RS_RS03435 | | dTDP-4-dehydrorhamnose reductase | 0.59 | RS_RS03430 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_0925 | | dTDP-4-dehydrorhamnose reductase | 0.65 | Psyr_4935 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_10055 | | dTDP-4-dehydrorhamnose reductase | 0.67 | AO356_10040 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_0925 | | dTDP-4-dehydrorhamnose reductase | 0.65 | Psyr_4935 | | dTDP-glucose 4,6-dehydratase | — | — |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS19050 | | NAD(P)-dependent oxidoreductase | 0.61 | BWI76_RS19065 | | dTDP-glucose 4,6-dehydratase | 0.90 | 4 |
| Dickeya dianthicola 67-19 | 0.40 | HGI48_RS06770 | | dTDP-4-dehydrorhamnose reductase | 0.68 | HGI48_RS06755 | | dTDP-glucose 4,6-dehydratase | low | > 71 |
| Acinetobacter radioresistens SK82 | 0.39 | MPMX26_00451 | | dTDP-4-dehydrorhamnose reductase | 0.61 | MPMX26_00450 | | dTDP-glucose 4,6-dehydratase 2 | low | > 36 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_3881 | | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.66 | Pf6N2E2_3878 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS15835 | | dTDP-4-dehydrorhamnose reductase | 0.57 | RR42_RS15840 | | spore coat protein | — | — |
| Variovorax sp. OAS795 | 0.38 | ABID97_RS05665 | | dTDP-4-dehydrorhamnose reductase | 0.57 | ABID97_RS05660 | | dTDP-glucose 4,6-dehydratase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.38 | Dshi_4117 | | dTDP-4-dehydrorhamnose reductase (RefSeq) | 0.61 | Dshi_4115 | | dTDP-glucose 4,6-dehydratase (RefSeq) | 0.83 | 1 |
| Pseudomonas fluorescens FW300-N1B4 | 0.38 | Pf1N1B4_342 | | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.67 | Pf1N1B4_5939 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS21855 | | dTDP-4-dehydrorhamnose reductase | 0.53 | HSERO_RS22050 | | spore coat protein | — | — |
| Rahnella sp. WP5 | 0.38 | EX31_RS11505 | | dTDP-4-dehydrorhamnose reductase | 0.67 | EX31_RS11515 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia fergusonii Becca | 0.38 | EFB2_01814 | | dTDP-4-dehydrorhamnose reductase | 0.65 | EFB2_04851 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Pseudomonas putida KT2440 | 0.37 | PP_1784 | | dTDP-4-dehydrorhamnose reductase | 0.58 | PP_1785 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_001140 | | dTDP-4-dehydrorhamnose reductase | 0.59 | ABIE53_001137 | | dTDP-glucose 4,6-dehydratase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.37 | HMPREF1078_RS04150 | | dTDP-4-dehydrorhamnose reductase | 0.48 | HMPREF1078_RS00705 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli BW25113 | 0.37 | b2040 | rfbD | dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) | 0.65 | b3788 | rffG | dTDP-glucose 4,6-dehydratase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_03110 | rfbD | dTDP-4-dehydrorhamnose reductase | 0.65 | HEPCGN_13270 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Acidovorax sp. GW101-3H11 | 0.37 | Ac3H11_1881 | | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.55 | Ac3H11_1880 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_04825 | | dTDP-4-dehydrorhamnose reductase | 0.59 | H281DRAFT_04822 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli BL21 | 0.37 | ECD_01946 | | dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit | 0.65 | ECD_03666 | | dTDP-glucose 4,6-dehydratase | low | > 60 |
| Variovorax sp. SCN45 | 0.37 | GFF6881 | | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.57 | GFF6882 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS08650 | | dTDP-4-dehydrorhamnose reductase | 0.59 | ABZR87_RS08645 | | dTDP-glucose 4,6-dehydratase | low | > 80 |
| Azospirillum brasilense Sp245 | 0.36 | AZOBR_RS33420 | | dTDP-4-dehydrorhamnose reductase | 0.60 | AZOBR_RS33415 | | dTDP-glucose 4 6-dehydratase | 0.61 | 29 |
| Phocaeicola dorei CL03T12C01 | 0.36 | ABI39_RS13375 | | dTDP-4-dehydrorhamnose reductase | 0.53 | ABI39_RS13370 | | dTDP-glucose 4,6-dehydratase | low | > 72 |
| Burkholderia phytofirmans PsJN | 0.36 | BPHYT_RS04280 | | dTDP-4-dehydrorhamnose reductase | 0.59 | BPHYT_RS04265 | | dTDP-glucose 4,6-dehydratase | — | — |
| Erwinia tracheiphila SCR3 | 0.36 | LU632_RS08855 | rfbD | dTDP-4-dehydrorhamnose reductase | 0.63 | LU632_RS08850 | rfbB | dTDP-glucose 4,6-dehydratase | 0.50 | 20 |
| Dechlorosoma suillum PS | 0.36 | Dsui_1949 | | dTDP-4-dehydrorhamnose reductase | 0.55 | Dsui_1948 | | dTDP-glucose 4,6-dehydratase | — | — |
| Lysobacter sp. OAE881 | 0.36 | ABIE51_RS15605 | | dTDP-4-dehydrorhamnose reductase | 0.52 | ABIE51_RS15620 | | dTDP-glucose 4,6-dehydratase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF3888 | | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.66 | GFF2885 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 78 |
| Caulobacter crescentus NA1000 Δfur | 0.35 | CCNA_01198 | | dTDP-4-dehydrorhamnose reductase | 0.67 | CCNA_03744 | | dTDP-glucose 4,6-dehydratase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.35 | CCNA_01198 | | dTDP-4-dehydrorhamnose reductase | 0.67 | CCNA_03744 | | dTDP-glucose 4,6-dehydratase | 0.59 | 10 |
| Rhodanobacter denitrificans MT42 | 0.35 | LRK55_RS05435 | | dTDP-4-dehydrorhamnose reductase | 0.55 | LRK55_RS05420 | | dTDP-glucose 4,6-dehydratase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.35 | BT1730 | | putative dTDP-4-dehydrorhamnose reductase (NCBI ptt file) | 0.49 | BT0466 | | dTDP-glucose 4,6-dehydratase (NCBI ptt file) | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.35 | LRK54_RS05680 | | dTDP-4-dehydrorhamnose reductase | 0.55 | LRK54_RS05665 | | dTDP-glucose 4,6-dehydratase | — | — |
| Castellaniella sp019104865 MT123 | 0.35 | ABCV34_RS02405 | | dTDP-4-dehydrorhamnose reductase | 0.65 | ABCV34_RS02410 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.34 | OHPLBJKB_01662 | | dTDP-4-dehydrorhamnose reductase | 0.65 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 73 |
| Bacteroides ovatus ATCC 8483 | 0.34 | BACOVA_04459 | | dTDP-4-dehydrorhamnose reductase | 0.49 | BACOVA_03743 | | dTDP-glucose 4,6-dehydratase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.34 | ABZR86_RS18720 | | dTDP-4-dehydrorhamnose reductase | 0.56 | ABZR86_RS18735 | | dTDP-glucose 4,6-dehydratase | 0.77 | 2 |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS25740 | | dTDP-4-dehydrorhamnose reductase | 0.58 | QEN71_RS25755 | | dTDP-glucose 4,6-dehydratase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.33 | ABZR88_RS17490 | | dTDP-4-dehydrorhamnose reductase | 0.54 | ABZR88_RS17425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.33 | PGA1_65p00230 | | dTDP-4-dehydrorhamnose reductase RfbD | 0.59 | PGA1_65p00240 | | dTDP-glucose 4,6-dehydratase RffG | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.33 | GFF1838 | | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.56 | GFF1837 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.33 | Xcc-8004.4483.1 | | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.56 | Xcc-8004.4486.1 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.33 | CA265_RS19330 | | dTDP-4-dehydrorhamnose reductase | 0.52 | CA265_RS19340 | | dTDP-glucose 4,6-dehydratase | — | — |
| Bacteroides stercoris CC31F | 0.32 | HMPREF1181_RS05590 | | dTDP-4-dehydrorhamnose reductase | 0.46 | HMPREF1181_RS08020 | | dTDP-glucose 4,6-dehydratase | — | — |
| Shewanella amazonensis SB2B | 0.32 | Sama_2239 | | dTDP-4-dehydrorhamnose reductase (RefSeq) | 0.57 | Sama_2242 | | dTDP-glucose 4,6-dehydratase (RefSeq) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.32 | HMPREF1058_RS07940 | | dTDP-4-dehydrorhamnose reductase | 0.47 | HMPREF1058_RS02350 | | dTDP-glucose 4,6-dehydratase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.31 | OKGIIK_01160 | rfbD | dTDP-4-dehydrorhamnose reductase | 0.55 | OKGIIK_01175 | rfbB | dTDP-glucose 4,6-dehydratase | 0.71 | 30 |
| Alteromonas macleodii MIT1002 | 0.30 | MIT1002_03558 | | dTDP-4-dehydrorhamnose reductase | 0.64 | MIT1002_03557 | | dTDP-glucose 4,6-dehydratase | — | — |
| Synechococcus elongatus PCC 7942 | 0.30 | Synpcc7942_2099 | rfbD | dTDP-4-dehydrorhamnose reductase | 0.62 | Synpcc7942_2100 | rfbB | dTDP-glucose 4,6-dehydratase | low | > 38 |
| Magnetospirillum magneticum AMB-1 | 0.28 | AMB_RS07440 | | dTDP-4-dehydrorhamnose reductase | 0.58 | AMB_RS00295 | | dTDP-glucose 4,6-dehydratase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.26 | DVU1363 | rfbD | dTDP-4-dehydrorhamnose reductase (TIGR) | 0.41 | DVU1364 | rfbB | dTDP-glucose 4,6-dehydratase (TIGR) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.24 | DvMF_0140 | | dTDP-4-dehydrorhamnose reductase (RefSeq) | 0.43 | DvMF_0141 | | dTDP-glucose 4,6-dehydratase (RefSeq) | — | — |
| Mycobacterium tuberculosis H37Rv | 0.24 | Rv3266c | | dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD (dTDP-rhamnose modification protein) (dTDP-rhamnose biosynthesis protein) (dTDP-rhamnose synthase) | 0.38 | Rv3464 | | dTDP-glucose 4,6-dehydratase RmlB | — | — |
| Shewanella oneidensis MR-1 | 0.22 | SO1653 | rfbD | dTDP-4-dehydrorhamnose reductase (NCBI ptt file) | 0.65 | SO3188 | rfbB | dTDP-glucose 4,6-dehydratase (NCBI ptt file) | — | — |
| Fusobacterium nucleatum SB010 | 0.22 | HUW76_01315 | | dTDP-4-dehydrorhamnose reductase | 0.43 | HUW76_01440 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.19 | CA264_19930 | | NAD(P)-dependent oxidoreductase | 0.52 | CA264_17910 | | dTDP-glucose 4,6-dehydratase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.16 | Echvi_1746 | | dTDP-4-dehydrorhamnose reductase | 0.51 | Echvi_2329 | | dTDP-glucose 4,6-dehydratase | — | — |
Not shown: 0 genomes with orthologs for Atu4616 only; 16 genomes with orthologs for Atu4617 only