| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu3298 | | C4-dicarboxylate transporter DctA | 1.0 | Atu3739 | | phosphoglycerate kinase | 0.31 | 14 |
| Sinorhizobium meliloti 1021 | 0.80 | SM_b20611 | | C4-dicarboxylate transporter DctA | 0.79 | SMc03981 | | phosphoglycerate kinase | 0.31 | 32 |
| Rhizobium sp. OAE497 | 0.78 | ABIE40_RS26345 | | dicarboxylate/amino acid:cation symporter | 0.82 | ABIE40_RS15885 | | phosphoglycerate kinase | — | — |
| Rhodospirillum rubrum S1H | 0.75 | Rru_A1437 | | Sodium:dicarboxylate symporter (NCBI) | 0.58 | Rru_A0221 | | Phosphoglycerate kinase (NCBI) | — | — |
| Castellaniella sp019104865 MT123 | 0.73 | ABCV34_RS02715 | | dicarboxylate/amino acid:cation symporter | 0.37 | ABCV34_RS15460 | | phosphoglycerate kinase | — | — |
| Xanthobacter sp. DMC5 | 0.73 | GFF3677 | | C4-dicarboxylate transport protein | 0.63 | GFF90 | | Bifunctional PGK/TIM | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.70 | Xcc-8004.1034.1 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | 0.39 | Xcc-8004.1241.1 | | Phosphoglycerate kinase (EC 2.7.2.3) | low | > 74 |
| Sphingobium sp. HT1-2 | 0.69 | GFF161 | | Na+/H+-dicarboxylate symporter | 0.58 | GFF2131 | | Phosphoglycerate kinase (EC 2.7.2.3) | low | > 95 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.68 | A4249_RS04425 | | dicarboxylate/amino acid:cation symporter | 0.58 | A4249_RS10045 | | phosphoglycerate kinase | — | — |
| Acinetobacter baumannii LAC-4 | 0.68 | RR41_RS06660 | | dicarboxylate/amino acid:cation symporter | 0.39 | RR41_RS11990 | | phosphoglycerate kinase | — | — |
| Acidovorax sp. GW101-3H11 | 0.65 | Ac3H11_719 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | 0.34 | Ac3H11_4404 | | Phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.64 | Ga0059261_0617 | | Na+/H+-dicarboxylate symporters | 0.57 | Ga0059261_0728 | | phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Escherichia coli ECRC62 | 0.61 | BNILDI_03395 | dctA | C4-dicarboxylate transporter DctC | 0.38 | BNILDI_09840 | pgk | phosphoglycerate kinase | — | — |
| Escherichia coli ECOR38 | 0.61 | HEPCGN_15100 | dctA | C4-dicarboxylate transporter DctC | 0.38 | HEPCGN_18700 | pgk | phosphoglycerate kinase | — | — |
| Escherichia coli BW25113 | 0.61 | b3528 | dctA | C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) | 0.38 | b2926 | pgk | phosphoglycerate kinase (NCBI) | — | — |
| Escherichia coli ECOR27 | 0.61 | NOLOHH_08160 | dctA | C4-dicarboxylate transporter DctC | 0.38 | NOLOHH_11300 | pgk | phosphoglycerate kinase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.61 | OHPLBJKB_00174 | | Aerobic C4-dicarboxylate transport protein | 0.39 | OHPLBJKB_00790 | | Phosphoglycerate kinase | — | — |
| Escherichia coli Nissle 1917 | 0.61 | ECOLIN_RS20180 | | C4-dicarboxylate transporter DctC | 0.38 | ECOLIN_RS16260 | | phosphoglycerate kinase | — | — |
| Escherichia coli BL21 | 0.61 | ECD_03376 | | C4-dicarboxylic acid, orotate and citrate transporter | 0.38 | ECD_02757 | | phosphoglycerate kinase | — | — |
| Escherichia fergusonii Becca | 0.61 | EFB2_00280 | | Aerobic C4-dicarboxylate transport protein | 0.38 | EFB2_00980 | | Phosphoglycerate kinase | — | — |
| Escherichia coli ECRC101 | 0.61 | MCAODC_06710 | dctA | C4-dicarboxylate transporter DctC | 0.38 | MCAODC_09910 | pgk | phosphoglycerate kinase | — | — |
| Escherichia coli ECRC100 | 0.61 | OKFHMN_16195 | dctA | C4-dicarboxylate transporter DctC | 0.38 | OKFHMN_19390 | pgk | phosphoglycerate kinase | — | — |
| Rahnella sp. WP5 | 0.61 | EX31_RS05445 | | dicarboxylate/amino acid:cation symporter | 0.39 | EX31_RS21410 | | phosphoglycerate kinase | — | — |
| Escherichia coli ECRC98 | 0.61 | JDDGAC_19825 | dctA | C4-dicarboxylate transporter DctC | 0.38 | JDDGAC_23020 | pgk | phosphoglycerate kinase | — | — |
| Escherichia coli ECRC102 | 0.61 | NIAGMN_13960 | dctA | C4-dicarboxylate transporter DctC | 0.38 | NIAGMN_17155 | pgk | phosphoglycerate kinase | — | — |
| Pseudomonas lactucae CFBP13502 | 0.61 | GEMAOFIL_04444 | | C4-dicarboxylate transport protein 2 | 0.37 | GEMAOFIL_05418 | | Phosphoglycerate kinase | low | > 96 |
| Escherichia coli ECRC99 | 0.61 | KEDOAH_11955 | dctA | C4-dicarboxylate transporter DctC | 0.38 | KEDOAH_08750 | pgk | phosphoglycerate kinase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.61 | PFLU_RS23115 | | dicarboxylate/amino acid:cation symporter | 0.37 | PFLU_RS28085 | | phosphoglycerate kinase | — | — |
| Pseudomonas orientalis W4I3 | 0.61 | QF045_RS23590 | | dicarboxylate/amino acid:cation symporter | 0.38 | QF045_RS00830 | | phosphoglycerate kinase | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.61 | PFLU_RS23115 | | dicarboxylate/amino acid:cation symporter | 0.37 | PFLU_RS28085 | | phosphoglycerate kinase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_3707 | | Sodium:dicarboxylate symporter | 0.36 | Psyr_4790 | | phosphoglycerate kinase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_3707 | | Sodium:dicarboxylate symporter | 0.36 | Psyr_4790 | | phosphoglycerate kinase | — | — |
| Pseudomonas simiae WCS417 | 0.60 | PS417_21500 | | C4 dicarboxylate transporter DctA (from data) | 0.37 | PS417_26430 | | phosphoglycerate kinase | — | — |
| Pseudomonas sp. DMC3 | 0.60 | GFF4837 | | C4-dicarboxylate transport protein 2 | 0.36 | GFF156 | | Phosphoglycerate kinase | — | — |
| Pseudomonas aeruginosa PA14 | 0.60 | IKLFDK_05485 | | C4-dicarboxylate transporter DctC | 0.37 | IKLFDK_22665 | | Phosphoglycerate kinase | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.60 | DQ20_RS46295 | dctA;inference=COORDINATES | C4-dicarboxylate transporter DctC | 0.37 | DQ20_RS36560 | | phosphoglycerate kinase | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.60 | DY961_RS06500 | dctA;inference=COORDINATES | C4-dicarboxylate transporter DctC | 0.37 | DY961_RS22780 | | phosphoglycerate kinase | — | — |
| Ralstonia solanacearum GMI1000 | 0.60 | RS_RS01625 | | C4-dicarboxylate transporter 1 | 0.37 | RS_RS02860 | | phosphoglycerate kinase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.60 | RPSI07_RS22530 | | dicarboxylate/amino acid:cation symporter | 0.37 | RPSI07_RS21155 | | phosphoglycerate kinase | — | — |
| Acinetobacter radioresistens SK82 | 0.59 | MPMX26_02024 | | C4-dicarboxylate transport protein 2 | 0.37 | MPMX26_01733 | | Phosphoglycerate kinase | — | — |
| Pseudomonas putida KT2440 | 0.59 | PP_1188 | | C4-dicarboxylate transport protein | 0.36 | PP_4963 | | Phosphoglycerate kinase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_3487 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | 0.37 | Pf1N1B4_2399 | | Phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS02795 | | dicarboxylate/amino acid:cation symporter | 0.38 | UW163_RS01435 | | phosphoglycerate kinase | — | — |
| Dickeya dianthicola ME23 | 0.59 | DZA65_RS21850 | | dicarboxylate/amino acid:cation symporter | 0.38 | DZA65_RS19575 | | phosphoglycerate kinase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS10785 | | dicarboxylate/amino acid:cation symporter | 0.37 | RALBFv3_RS12175 | | phosphoglycerate kinase | — | — |
| Dickeya dianthicola 67-19 | 0.59 | HGI48_RS20835 | | dicarboxylate/amino acid:cation symporter | 0.38 | HGI48_RS18440 | | phosphoglycerate kinase | — | — |
| Klebsiella michiganensis M5al | 0.59 | BWI76_RS26760 | | C4-dicarboxylate transport protein DctA (from data) | 0.38 | BWI76_RS23980 | | phosphoglycerate kinase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS06625 | | dicarboxylate/amino acid:cation symporter | 0.37 | ABZR87_RS08065 | | phosphoglycerate kinase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_5707 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate | 0.36 | Pf6N2E2_4657 | | Phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Serratia liquefaciens MT49 | 0.59 | IAI46_00550 | | dicarboxylate/amino acid:cation symporter | 0.39 | IAI46_21010 | | phosphoglycerate kinase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_2016 | | C4-dicarboxylate transporter (from data) | 0.36 | PfGW456L13_1066 | | Phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Pseudomonas sp. BP01 | 0.59 | JOY50_RS01965 | | dicarboxylate/amino acid:cation symporter | 0.36 | JOY50_RS09880 | | phosphoglycerate kinase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS01365 | | dicarboxylate/amino acid:cation symporter | 0.38 | QEN71_RS02425 | | phosphoglycerate kinase | low | > 153 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_18980 | | sodium:C4-dicarboxylate symporter (dctA) (from data) | 0.36 | AO356_13690 | | phosphoglycerate kinase | — | — |
| Pseudomonas sp. SVBP6 | 0.59 | COO64_RS07410 | | dicarboxylate/amino acid:cation symporter | 0.35 | COO64_RS17565 | | phosphoglycerate kinase | — | — |
| Pseudomonas sp. RS175 | 0.59 | PFR28_03241 | | C4-dicarboxylate transport protein 2 | 0.37 | PFR28_04186 | | Phosphoglycerate kinase | — | — |
| Paraburkholderia graminis OAS925 | 0.59 | ABIE53_000646 | | aerobic C4-dicarboxylate transport protein | 0.36 | ABIE53_003428 | | phosphoglycerate kinase | low | > 113 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_04413 | | Aerobic C4-dicarboxylate transport protein | 0.39 | MPMX20_03778 | | Phosphoglycerate kinase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_02039 | | aerobic C4-dicarboxylate transport protein | 0.37 | H281DRAFT_04190 | | phosphoglycerate kinase | — | — |
| Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS02510 | | C4-dicarboxylate ABC transporter | 0.36 | BPHYT_RS16270 | | phosphoglycerate kinase | 0.16 | 33 |
| Pantoea agglomerans CFBP13505 P0401 | 0.59 | PagCFBP13505_RS15580 | | dicarboxylate/amino acid:cation symporter | 0.36 | PagCFBP13505_RS16010 | | phosphoglycerate kinase | — | — |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS00330 | | dicarboxylate/amino acid:cation symporter | 0.35 | LU632_RS05540 | pgk | phosphoglycerate kinase | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.58 | IJEDHG_10165 | dctA | C4-dicarboxylate transport protein | 0.35 | IJEDHG_03370 | pgk | phosphoglycerate kinase | — | — |
| Pseudomonas sp. S08-1 | 0.58 | OH686_20585 | | Na+/H+-dicarboxylate symporter | 0.36 | OH686_10760 | | Phosphoglycerate kinase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.58 | RR42_RS01695 | | C4-dicarboxylate transporter | 0.38 | RR42_RS03200 | | phosphoglycerate kinase | — | — |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS26560 | | dicarboxylate/amino acid:cation symporter | 0.37 | ABID97_RS12890 | | phosphoglycerate kinase | — | — |
| Klebsiella pneumoniae MKP103 | 0.58 | KDGMDA_07500 | | C4-dicarboxylate transport protein | 0.38 | KDGMDA_04455 | | phosphoglycerate kinase | — | — |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_4049 | | Na+/H+-dicarboxylate symporters | 0.38 | EX28DRAFT_2972 | | phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS00400 | | dicarboxylate/amino acid:cation symporter | 0.38 | HER17_RS02690 | | phosphoglycerate kinase | — | — |
| Pantoea sp. MT58 | 0.58 | IAI47_18585 | | dicarboxylate/amino acid:cation symporter | 0.36 | IAI47_03690 | | phosphoglycerate kinase | — | — |
| Erwinia amylovora T8 | 0.57 | OLJFJH_04805 | | C4-dicarboxylate transport protein | 0.36 | OLJFJH_08655 | | phosphoglycerate kinase | — | — |
| Dickeya dadantii 3937 | 0.57 | DDA3937_RS00555 | | dicarboxylate/amino acid:cation symporter | 0.38 | DDA3937_RS18515 | | phosphoglycerate kinase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.57 | GFF495 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate | 0.38 | GFF3021 | | Phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.57 | AO353_02800 | | C4-dicarboxylate transporter | 0.36 | AO353_07945 | | phosphoglycerate kinase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS13105 | | C4-dicarboxylate ABC transporter | 0.37 | HSERO_RS03345 | | phosphoglycerate kinase | — | — |
| Dechlorosoma suillum PS | 0.57 | Dsui_3158 | | Na+/H+ dicarboxylate symporter | 0.38 | Dsui_1557 | | 3-phosphoglycerate kinase | — | — |
| Variovorax sp. SCN45 | 0.57 | GFF1694 | | Na+/H+-dicarboxylate symporter | 0.35 | GFF5503 | | Phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.56 | ABZR86_RS08515 | | dicarboxylate/amino acid:cation symporter | 0.39 | ABZR86_RS18675 | | phosphoglycerate kinase | low | > 74 |
| Caulobacter crescentus NA1000 | 0.56 | CCNA_00664 | | C4-dicarboxylate transport protein | 0.58 | CCNA_03359 | | phosphoglycerate kinase | — | — |
| Azospirillum sp. SherDot2 | 0.56 | MPMX19_04253 | | Aerobic C4-dicarboxylate transport protein | 0.63 | MPMX19_02191 | | Bifunctional PGK/TIM | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.56 | CCNA_00664 | | C4-dicarboxylate transport protein | 0.58 | CCNA_03359 | | phosphoglycerate kinase | — | — |
| Azospirillum brasilense Sp245 | 0.54 | AZOBR_RS21140 | | C4-dicarboxylate ABC transporter | 0.61 | AZOBR_RS03885 | | phosphoglycerate kinase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.54 | TX73_012660 | | dicarboxylate/amino acid:cation symporter | 0.65 | TX73_004860 | | phosphoglycerate kinase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.47 | CA265_RS15560 | | glutamate/aspartate:proton symporter GltP | 0.42 | CA265_RS01880 | | phosphoglycerate kinase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.45 | ABZR88_RS20325 | | C4-dicarboxylate transporter DctA | 0.43 | ABZR88_RS14215 | | phosphoglycerate kinase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.35 | Rv2443 | | Probable C4-dicarboxylate-transport transmembrane protein DctA | 0.34 | Rv1437 | | Probable phosphoglycerate kinase Pgk | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.30 | CA264_01055 | | dicarboxylate/amino acid:cation symporter | 0.40 | CA264_09360 | | phosphoglycerate kinase | low | > 74 |
| Shewanella amazonensis SB2B | 0.27 | Sama_2768 | | proton/glutamate symporter (RefSeq) | 0.40 | Sama_2757 | pgk | phosphoglycerate kinase (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.27 | Shewana3_3362 | | sodium:dicarboxylate symporter (RefSeq) | 0.40 | Shewana3_3351 | pgk | phosphoglycerate kinase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.27 | SO0922 | | proton/glutamate symporter (NCBI ptt file) | 0.39 | SO0932 | pgk | phosphoglycerate kinase (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.27 | Shew_0743 | | sodium:dicarboxylate symporter (RefSeq) | 0.40 | Shew_0754 | pgk | phosphoglycerate kinase (RefSeq) | — | — |
| Pseudomonas segetis P6 | 0.25 | MPMX49_00162 | | Proton/glutamate-aspartate symporter | 0.36 | MPMX49_00655 | | Phosphoglycerate kinase | — | — |
| Pseudomonas stutzeri RCH2 | 0.24 | Psest_4075 | | symporter for L-glutamate, L-glutamine, and L-proline (from data) | 0.35 | Psest_0330 | | 3-phosphoglycerate kinase | — | — |
| Cellulophaga baltica 18 | 0.22 | M666_RS15550 | | dicarboxylate/amino acid:cation symporter | 0.43 | M666_RS05215 | | phosphoglycerate kinase | 0.37 | 48 |
| Kangiella aquimarina DSM 16071 | 0.21 | B158DRAFT_2215 | | Na+/H+-dicarboxylate symporters | 0.40 | B158DRAFT_0513 | | phosphoglycerate kinase (EC 2.7.2.3) | — | — |
| Alteromonas macleodii MIT1002 | 0.20 | MIT1002_01702 | | Glutamate-aspartate carrier protein | 0.42 | MIT1002_00863 | | Phosphoglycerate kinase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.20 | Echvi_1519 | | Na+/H+-dicarboxylate symporters | 0.41 | Echvi_0337 | | 3-phosphoglycerate kinase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.19 | CSW01_05920 | | dicarboxylate/amino acid:cation symporter | 0.40 | CSW01_02535 | | phosphoglycerate kinase | — | — |
| Marinobacter adhaerens HP15 | 0.17 | HP15_2676 | | proton/sodium-glutamate symport protein | 0.41 | HP15_2911 | | phosphoglycerate kinase | — | — |
| Methylophilus sp. DMC18 | 0.16 | GFF2299 | | Proton/sodium-glutamate symport protein | 0.38 | GFF1709 | | Phosphoglycerate kinase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.14 | OKGIIK_06560 | gltP | dicarboxylate/amino acid:cation symporter | 0.38 | OKGIIK_01110 | pgk | phosphoglycerate kinase | low | > 53 |
| Rhodanobacter sp000427505 FW510-R12 | 0.13 | LRK53_RS09455 | | dicarboxylate/amino acid:cation symporter | 0.38 | LRK53_RS04285 | | phosphoglycerate kinase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.13 | LRK55_RS00475 | | dicarboxylate/amino acid:cation symporter | 0.38 | LRK55_RS05495 | | phosphoglycerate kinase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.13 | LRK54_RS00700 | | dicarboxylate/amino acid:cation symporter | 0.38 | LRK54_RS05740 | | phosphoglycerate kinase | low | > 59 |
Not shown: 0 genomes with orthologs for Atu3298 only; 19 genomes with orthologs for Atu3739 only