Conservation of cofitness between Atu0817 and Atu2709 in Agrobacterium fabrum C58

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0817 sulfate adenylate transferase, subunit 2 1.0 Atu2709 3-isopropylmalate dehydratase, large subunit 0.56 4
Sinorhizobium meliloti 1021 0.86 SMc00091 sulfate adenylyltransferase 0.88 SMc03823 isopropylmalate isomerase large subunit 0.93 7
Rhizobium sp. OAE497 0.85 ABIE40_RS04470 sulfate adenylyltransferase subunit CysD 0.87 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.85 10
Shewanella loihica PV-4 0.68 Shew_1422 sulfate adenylyltransferase subunit 2 (RefSeq) 0.63 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.76 16
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_12960 sulfate adenylyltransferase subunit CysD 0.60 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Marinobacter adhaerens HP15 0.67 HP15_2462 sulfate adenylyltransferase, small subunit 0.65 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain 0.88 16
Dickeya dianthicola 67-19 0.67 HGI48_RS16995 sulfate adenylyltransferase subunit CysD 0.63 HGI48_RS18065 3-isopropylmalate dehydratase large subunit low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS18070 sulfate adenylyltransferase subunit CysD 0.63 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.70 50
Dickeya dadantii 3937 0.67 DDA3937_RS16925 sulfate adenylyltransferase subunit CysD 0.64 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit low > 74
Shewanella sp. ANA-3 0.67 Shewana3_0863 sulfate adenylyltransferase subunit 2 (RefSeq) 0.63 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.90 20
Enterobacter sp. TBS_079 0.67 MPMX20_03638 Sulfate adenylyltransferase subunit 2 0.64 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.56 25
Pseudomonas sp. S08-1 0.67 OH686_08450 Sulfate adenylyltransferase subunit 2 0.64 OH686_04480 3-isopropylmalate dehydratase large subunit
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2848 sulfate adenylyltransferase, small subunit 0.64 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.82 22
Shewanella oneidensis MR-1 0.66 SO3727 cysD sulfate adenylyltransferase, subunit 2 (NCBI ptt file) 0.63 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.96 11
Klebsiella michiganensis M5al 0.66 BWI76_RS22700 sulfate adenylyltransferase subunit 2 0.64 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.58 31
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_2360 sulfate adenylyltransferase, small subunit 0.65 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit low > 40
Pectobacterium carotovorum WPP14 0.66 HER17_RS04285 sulfate adenylyltransferase subunit CysD 0.63 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.88 40
Rahnella sp. WP5 0.66 EX31_RS07880 sulfate adenylyltransferase subunit CysD 0.63 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.94 22
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00981 Sulfate adenylyltransferase subunit 2 0.64 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Acinetobacter radioresistens SK82 0.66 MPMX26_02326 Sulfate adenylyltransferase subunit 2 0.64 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.83 12
Escherichia coli ECRC62 0.66 BNILDI_10805 cysD sulfate adenylyltransferase subunit CysD 0.64 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.66 OKFHMN_20440 cysD sulfate adenylyltransferase subunit CysD 0.64 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR38 0.66 HEPCGN_19620 cysD sulfate adenylyltransferase subunit CysD 0.64 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 85
Escherichia coli ECOR27 0.66 NOLOHH_12255 cysD sulfate adenylyltransferase subunit CysD 0.64 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 57
Escherichia coli BW25113 0.66 b2752 cysD sulfate adenylyltransferase subunit 2 (NCBI) 0.64 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.88 11
Escherichia coli ECRC102 0.66 NIAGMN_18210 cysD sulfate adenylyltransferase subunit CysD 0.64 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC98 0.66 JDDGAC_24105 cysD sulfate adenylyltransferase subunit CysD 0.64 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.66 MCAODC_10965 cysD sulfate adenylyltransferase subunit CysD 0.64 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli BL21 0.66 ECD_02602 sulfate adenylyltransferase, subunit 2 0.64 ECD_00074 3-isopropylmalate dehydratase large subunit low > 60
Escherichia coli ECRC99 0.66 KEDOAH_07700 cysD sulfate adenylyltransferase subunit CysD 0.64 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia fergusonii Becca 0.66 EFB2_01158 Sulfate adenylyltransferase subunit 2 0.64 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_05080 sulfate adenylyltransferase 0.64 AO353_20620 isopropylmalate isomerase 0.70 11
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4128 sulfate adenylyltransferase subunit 2 0.63 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.76 25
Serratia liquefaciens MT49 0.66 IAI46_03715 sulfate adenylyltransferase subunit CysD 0.62 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4128 sulfate adenylyltransferase subunit 2 0.63 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.86 8
Pantoea sp. MT58 0.66 IAI47_04180 sulfate adenylyltransferase subunit CysD 0.64 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.81 8
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_4993 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.64 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.75 14
Pseudomonas putida KT2440 0.66 PP_1303 Sulfate adenylyltransferase subunit 2 0.64 PP_1985 3-isopropylmalate dehydratase large subunit 0.52 12
Escherichia coli Nissle 1917 0.66 ECOLIN_RS15385 sulfate adenylyltransferase subunit CysD 0.64 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 52
Pseudomonas simiae WCS417 0.65 PS417_03715 sulfate adenylyltransferase subunit 2 0.63 PS417_18600 isopropylmalate isomerase
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5257 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.64 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.53 14
Pseudomonas fluorescens SBW25 0.65 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.64 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_16665 sulfate adenylyltransferase 0.64 AO356_21400 isopropylmalate isomerase 0.66 17
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.64 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4800 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.64 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Pseudomonas sp. RS175 0.65 PFR28_00193 Sulfate adenylyltransferase subunit 2 0.65 PFR28_02824 3-isopropylmalate dehydratase large subunit low > 88
Shewanella amazonensis SB2B 0.64 Sama_2891 sulfate adenylyltransferase subunit 2 (RefSeq) 0.61 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.94 20
Alteromonas macleodii MIT1002 0.64 MIT1002_01274 Sulfate adenylyltransferase subunit 2 0.61 MIT1002_00947 3-isopropylmalate dehydratase large subunit
Azospirillum sp. SherDot2 0.64 MPMX19_06719 Sulfate adenylyltransferase subunit 2 0.74 MPMX19_01998 3-isopropylmalate dehydratase large subunit low > 112
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1058 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.64 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Erwinia tracheiphila SCR3 0.64 LU632_RS06425 cysD sulfate adenylyltransferase subunit CysD 0.60 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit low > 74
Pseudomonas stutzeri RCH2 0.63 Psest_3294 sulfate adenylyltransferase, small subunit 0.63 Psest_2591 3-isopropylmalate dehydratase, large subunit
Caulobacter crescentus NA1000 Δfur 0.62 CCNA_01550 sulfate adenylyltransferase subunit 2 0.66 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Caulobacter crescentus NA1000 0.62 CCNA_01550 sulfate adenylyltransferase subunit 2 0.66 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.88 36
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS15305 sulfate adenylyltransferase subunit CysD 0.49 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.99 17
Rhodospirillum rubrum S1H 0.62 Rru_A2289 Sulfate adenylyltransferase, small subunit (NCBI) 0.72 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI)
Bacteroides ovatus ATCC 8483 0.61 BACOVA_01768 putative sulfate adenylyltransferase subunit 2 0.51 BACOVA_04603 3-isopropylmalate dehydratase, large subunit low > 94
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1259.1 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.64 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 74
Bacteroides thetaiotaomicron VPI-5482 0.61 BT0414 sulfate adenylyltransferase subunit 2 (NCBI ptt file) 0.50 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) low > 81
Lysobacter sp. OAE881 0.61 ABIE51_RS15820 sulfate adenylyltransferase subunit CysD 0.52 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.92 47
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS01705 sulfate adenylyltransferase subunit CysD 0.51 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit low > 61
Bacteroides stercoris CC31F 0.61 HMPREF1181_RS04305 sulfate adenylyltransferase subunit CysD 0.52 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit low > 56
Phocaeicola vulgatus CL09T03C04 0.60 HMPREF1058_RS02945 sulfate adenylyltransferase subunit CysD 0.50 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit low > 67
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_01295 cysD sulfate adenylyltransferase subunit CysD 0.50 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Rhodanobacter denitrificans MT42 0.60 LRK55_RS05290 sulfate adenylyltransferase subunit CysD 0.56 LRK55_RS07105 3-isopropylmalate dehydratase large subunit
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS02260 sulfate adenylyltransferase subunit CysD 0.50 ABI39_RS10200 3-isopropylmalate dehydratase large subunit low > 72
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS05520 sulfate adenylyltransferase subunit CysD 0.56 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Bosea sp. OAE506 0.59 ABIE41_RS15370 sulfate adenylyltransferase subunit CysD 0.79 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Azospirillum brasilense Sp245 0.59 AZOBR_RS33775 sulfate adenylyltransferase subunit 2 0.73 AZOBR_RS03545 isopropylmalate isomerase low > 97
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS18865 sulfate adenylyltransferase subunit CysD 0.51 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit low > 74
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_4076 sulfate adenylyltransferase, small subunit 0.63 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit low > 68
Mycobacterium tuberculosis H37Rv 0.43 Rv1285 Probable sulfate adenylyltransferase subunit 2 CysD 0.59 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14115 sulfate adenylyltransferase subunit CysD 0.67 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit low > 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_0983 sulfate adenylyltransferase, small subunit 0.53 Echvi_2059 3-isopropylmalate dehydratase, large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS04115 sulfate adenylyltransferase 0.53 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.92 21
Dechlorosoma suillum PS 0.40 Dsui_1983 sulfate adenylyltransferase, small subunit 0.62 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS15565 sulfate adenylyltransferase subunit 2 0.66 HSERO_RS16515 isopropylmalate isomerase 0.90 3
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS04940 sulfate adenylyltransferase subunit CysD 0.53 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF4290 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.65 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.82 15
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_02545 sulfate adenylyltransferase small subunit 0.53 CA264_09435 3-isopropylmalate dehydratase large subunit low > 74
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS00195 sulfate adenylyltransferase subunit CysD 0.68 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.71 23
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS04585 sulfate adenylyltransferase subunit CysD 0.67 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum UW163 0.37 UW163_RS09085 sulfate adenylyltransferase subunit CysD 0.67 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Acidovorax sp. GW101-3H11 0.36 Ac3H11_574 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.64 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.86 7
Ralstonia solanacearum GMI1000 0.36 RS_RS12155 sulfate adenylyltransferase subunit CysD 0.66 RS_RS10000 3-isopropylmalate dehydratase large subunit low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS12790 sulfate adenylyltransferase subunit CysD 0.67 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.48 25
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16255 sulfate adenylyltransferase 0.67 RR42_RS14400 isopropylmalate isomerase 0.86 17
Variovorax sp. OAS795 0.36 ABID97_RS15365 sulfate adenylyltransferase subunit CysD 0.65 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Variovorax sp. SCN45 0.36 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.66 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS25240 sulfate adenylyltransferase subunit CysD 0.66 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.81 40
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS04740 sulfate adenylyltransferase subunit 2 0.66 BPHYT_RS33915 isopropylmalate isomerase 0.78 7
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_00117 sulfate adenylyltransferase subunit 2 0.66 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.61 22
Magnetospirillum magneticum AMB-1 0.34 AMB_RS11195 sulfate adenylyltransferase subunit 2 0.72 AMB_RS20560 3-isopropylmalate dehydratase large subunit
Rhodopseudomonas palustris CGA009 0.31 TX73_003885 sulfate adenylyltransferase subunit 2 0.76 TX73_001245 3-isopropylmalate dehydratase large subunit

Not shown: 0 genomes with orthologs for Atu0817 only; 9 genomes with orthologs for Atu2709 only