Conservation of cofitness between ABZR87_RS01105 and ABZR87_RS09660 in Ralstonia sp. UNC404CL21Col

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS01105 metalloprotease TldD 1.0 ABZR87_RS09660 metalloprotease PmbA 0.78 1
Ralstonia solanacearum IBSBF1503 0.92 RALBFv3_RS05455 metalloprotease TldD 0.91 RALBFv3_RS13965 metalloprotease PmbA 0.80 4
Ralstonia solanacearum UW163 0.92 UW163_RS08170 metalloprotease TldD 0.91 UW163_RS15845 metalloprotease PmbA — —
Ralstonia solanacearum GMI1000 0.92 RS_RS13315 metalloprotease TldD 0.85 RS_RS04700 metalloprotease PmbA 0.58 18
Ralstonia solanacearum PSI07 0.91 RPSI07_RS11850 metalloprotease TldD 0.89 RPSI07_RS19505 metalloprotease PmbA low > 81
Cupriavidus basilensis FW507-4G11 0.87 RR42_RS05875 protease TldD 0.78 RR42_RS14750 peptidase PMbA 0.67 1
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS03540 peptidase C69 0.72 BPHYT_RS14705 peptidase C69 0.27 34
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS26555 metalloprotease TldD 0.73 QEN71_RS04270 metalloprotease PmbA 0.87 30
Paraburkholderia graminis OAS925 0.78 ABIE53_000851 TldD protein 0.73 ABIE53_003116 PmbA protein 0.68 1
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_04688 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 0.73 H281DRAFT_04304 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 0.51 1
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07155 peptidase C69 0.74 HSERO_RS09265 peptidase C69 0.46 1
Acidovorax sp. GW101-3H11 0.73 Ac3H11_4036 TldD protein, part of TldE/TldD proteolytic complex 0.59 Ac3H11_3262 TldE protein, part of TldE/TldD proteolytic complex 0.36 33
Variovorax sp. SCN45 0.71 GFF4449 TldD protein, part of TldE/TldD proteolytic complex 0.59 GFF4697 TldE protein, part of TldE/TldD proteolytic complex 0.83 104
Variovorax sp. OAS795 0.71 ABID97_RS06335 metalloprotease TldD 0.59 ABID97_RS20695 metalloprotease PmbA 0.93 1
Castellaniella sp019104865 MT123 0.70 ABCV34_RS02590 metalloprotease TldD 0.59 ABCV34_RS10610 metalloprotease PmbA low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.69 GFF580 TldD protein, part of TldE/TldD proteolytic complex 0.61 GFF3655 TldE protein, part of TldE/TldD proteolytic complex 0.93 1
Dechlorosoma suillum PS 0.64 Dsui_3401 putative Zn-dependent protease-like protein 0.57 Dsui_1234 putative Zn-dependent protease-like protein 0.84 3
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS21715 metalloprotease TldD 0.45 ABZR86_RS21700 metalloprotease PmbA 0.53 6
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_10280 tldD metalloprotease TldD 0.44 OKGIIK_10260 pmbA metalloprotease PmbA 0.68 10
Lysobacter sp. OAE881 0.61 ABIE51_RS06795 metalloprotease TldD 0.41 ABIE51_RS06805 metalloprotease PmbA 0.62 39
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS03395 metalloprotease TldD 0.44 LRK54_RS03375 metalloprotease PmbA 0.96 1
Rhodanobacter denitrificans MT42 0.60 LRK55_RS03145 metalloprotease TldD 0.44 LRK55_RS03125 metalloprotease PmbA 0.69 42
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.1883.1 TldD protein, part of TldE/TldD proteolytic complex 0.44 Xcc-8004.1885.1 TldE protein, part of TldE/TldD proteolytic complex 0.76 1
Alteromonas macleodii MIT1002 0.59 MIT1002_00227 protease TldD 0.42 MIT1002_00230 peptidase PmbA 0.80 1
Pseudomonas putida KT2440 0.59 PP_0940 putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD 0.45 PP_0942 regulatory protease 0.57 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_4156 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 0.44 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 0.36 10
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_4156 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 0.44 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 0.38 9
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS04340 metalloprotease TldD 0.44 PFLU_RS04350 metalloprotease PmbA 0.69 1
Pseudomonas fluorescens SBW25 0.58 PFLU_RS04340 metalloprotease TldD 0.44 PFLU_RS04350 metalloprotease PmbA 0.48 48
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_05215 protease TldD 0.43 AO353_05205 peptidase PmbA 0.83 1
Pseudomonas simiae WCS417 0.58 PS417_04285 protease TldD 0.44 PS417_04295 peptidase PmbA 0.64 1
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1092 TldD protein, part of TldE/TldD proteolytic complex 0.44 Pf1N1B4_1090 TldE protein, part of TldE/TldD proteolytic complex 0.39 2
Pantoea sp. MT58 0.57 IAI47_02465 metalloprotease TldD 0.43 IAI47_02765 metalloprotease PmbA 0.93 1
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_07095 protease TldD 0.45 AO356_07085 peptidase PmbA 0.75 1
Escherichia coli ECRC101 0.57 MCAODC_08275 tldD metalloprotease TldD 0.44 MCAODC_02430 pmbA metalloprotease PmbA low > 87
Escherichia coli BW25113 0.57 b3244 tldD predicted peptidase (NCBI) 0.44 b4235 pmbA predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) 0.75 1
Escherichia coli ECRC102 0.57 NIAGMN_15515 tldD metalloprotease TldD 0.44 NIAGMN_09775 pmbA metalloprotease PmbA — —
Escherichia coli ECRC99 0.57 KEDOAH_10395 tldD metalloprotease TldD 0.44 KEDOAH_16230 pmbA metalloprotease PmbA — —
Escherichia coli ECOR38 0.57 HEPCGN_16620 tldD metalloprotease TldD 0.44 HEPCGN_10125 pmbA metalloprotease PmbA low > 87
Escherichia coli ECRC62 0.57 BNILDI_01980 tldD metalloprotease TldD 0.44 BNILDI_07325 pmbA metalloprotease PmbA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00460 Metalloprotease TldD 0.44 OHPLBJKB_03800 Metalloprotease PmbA low > 73
Escherichia coli Nissle 1917 0.57 ECOLIN_RS18595 metalloprotease TldD 0.43 ECOLIN_RS24570 metalloprotease PmbA low > 55
Escherichia fergusonii Becca 0.57 EFB2_00586 Metalloprotease TldD 0.43 EFB2_04298 Metalloprotease PmbA low > 86
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_3280 TldD protein, part of TldE/TldD proteolytic complex 0.45 Pf6N2E2_3278 TldE protein, part of TldE/TldD proteolytic complex 0.71 1
Escherichia coli ECRC98 0.57 JDDGAC_21380 tldD metalloprotease TldD 0.44 JDDGAC_15565 pmbA metalloprotease PmbA low > 86
Escherichia coli ECRC100 0.57 OKFHMN_17755 tldD metalloprotease TldD 0.44 OKFHMN_11925 pmbA metalloprotease PmbA 0.96 3
Escherichia coli BL21 0.57 ECD_03104 putative peptidase 0.44 ECD_04103 putative antibiotic peptide MccB17 maturation peptidase 0.74 2
Escherichia coli ECOR27 0.57 NOLOHH_09555 tldD metalloprotease TldD 0.44 NOLOHH_04185 pmbA metalloprotease PmbA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2140 TldD protein, part of TldE/TldD proteolytic complex 0.44 GFF904 TldE protein, part of TldE/TldD proteolytic complex 0.53 7
Dickeya dadantii 3937 0.57 DDA3937_RS01460 metalloprotease TldD 0.42 DDA3937_RS01500 metalloprotease PmbA 0.91 1
Serratia liquefaciens MT49 0.57 IAI46_22685 metalloprotease TldD 0.44 IAI46_22575 metalloprotease PmbA 0.55 15
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_5026 TldD protein, part of TldE/TldD proteolytic complex 0.44 PfGW456L13_5024 TldE protein, part of TldE/TldD proteolytic complex low > 87
Enterobacter sp. TBS_079 0.57 MPMX20_04151 Metalloprotease TldD 0.43 MPMX20_00517 Metalloprotease PmbA 0.31 13
Dickeya dianthicola 67-19 0.57 HGI48_RS01380 metalloprotease TldD 0.42 HGI48_RS01415 metalloprotease PmbA low > 71
Dickeya dianthicola ME23 0.56 DZA65_RS01440 metalloprotease TldD 0.42 DZA65_RS01480 metalloprotease PmbA low > 75
Pseudomonas sp. RS175 0.56 PFR28_00161 Metalloprotease TldD 0.45 PFR28_00163 Metalloprotease PmbA 0.68 1
Shewanella loihica PV-4 0.56 Shew_0410 peptidase U62, modulator of DNA gyrase (RefSeq) 0.41 Shew_0416 peptidase U62, modulator of DNA gyrase (RefSeq) 0.65 3
Shewanella sp. ANA-3 0.56 Shewana3_3641 microcin-processing peptidase 2 (RefSeq) 0.40 Shewana3_3631 microcin-processing peptidase 1 (RefSeq) 0.56 2
Klebsiella michiganensis M5al 0.56 BWI76_RS25470 metalloprotease TldD 0.44 BWI76_RS02850 metalloprotease PmbA low > 92
Pseudomonas stutzeri RCH2 0.56 Psest_3320 Predicted Zn-dependent proteases and their inactivated homologs 0.42 Psest_3318 Predicted Zn-dependent proteases and their inactivated homologs 0.46 1
Pectobacterium carotovorum WPP14 0.56 HER17_RS20140 metalloprotease TldD 0.44 HER17_RS20090 metalloprotease PmbA low > 75
Enterobacter asburiae PDN3 0.56 EX28DRAFT_3295 Predicted Zn-dependent proteases and their inactivated homologs 0.43 EX28DRAFT_3422 Predicted Zn-dependent proteases and their inactivated homologs low > 76
Erwinia tracheiphila SCR3 0.55 LU632_RS21420 tldD metalloprotease TldD 0.41 LU632_RS02145 pmbA metalloprotease PmbA 0.75 25
Pseudomonas sp. S08-1 0.55 OH686_08580 TldD protein, part of TldE/TldD proteolytic complex 0.43 OH686_08570 TldE protein, part of TldE/TldD proteolytic complex 0.63 61
Rahnella sp. WP5 0.55 EX31_RS12265 metalloprotease TldD 0.44 EX31_RS12320 metalloprotease PmbA 0.30 78
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_02220 metalloprotease TldD 0.43 CSW01_12845 metalloprotease PmbA 0.89 4
Shewanella oneidensis MR-1 0.54 SO4091 tldD tldD protein (NCBI ptt file) 0.40 SO4078 pmbA pmba protein (NCBI ptt file) 0.65 1
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_2072 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 0.36 B158DRAFT_2075 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 0.48 1
Azospirillum sp. SherDot2 0.52 MPMX19_00882 Metalloprotease TldD 0.29 MPMX19_01886 Metalloprotease PmbA 0.54 16
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2252 Predicted Zn-dependent proteases and their inactivated homologs 0.27 Ga0059261_0810 Predicted Zn-dependent proteases and their inactivated homologs low > 68
Shewanella amazonensis SB2B 0.52 Sama_0474 TldD protein (RefSeq) 0.43 Sama_0482 PmbA protein (RefSeq) 0.89 1
Azospirillum brasilense Sp245 0.52 AZOBR_RS10600 peptidase C69 0.30 AZOBR_RS11930 modulator protein 0.79 1
Rhodospirillum rubrum S1H 0.51 Rru_A0567 Peptidase U62, modulator of DNA gyrase (NCBI) 0.26 Rru_A0575 Peptidase U62, modulator of DNA gyrase (NCBI) 0.64 1
Rhodopseudomonas palustris CGA009 0.51 TX73_004255 metalloprotease TldD 0.26 TX73_005930 TldD/PmbA family protein 0.71 1
Caulobacter crescentus NA1000 0.50 CCNA_03522 Zn-dependent protease TldD 0.28 CCNA_00311 Zn-dependent protease family protein 0.92 1
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_03522 Zn-dependent protease TldD 0.28 CCNA_00311 Zn-dependent protease family protein low > 67
Rhizobium sp. OAE497 0.50 ABIE40_RS04050 metalloprotease TldD 0.24 ABIE40_RS03780 TldD/PmbA family protein 0.95 3
Magnetospirillum magneticum AMB-1 0.50 AMB_RS21030 metalloprotease TldD 0.27 AMB_RS22120 TldD/PmbA family protein low > 64
Sinorhizobium meliloti 1021 0.49 SMc00960 hypothetical protein 0.27 SMc00897 PMBA protein 0.49 1
Agrobacterium fabrum C58 0.49 Atu0765 TldD 0.24 Atu0693 PmbA/TldD related protein 0.28 5
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS10860 metalloprotease TldD 0.26 A4249_RS09195 TldD/PmbA family protein low > 48
Phaeobacter inhibens DSM 17395 0.47 PGA1_c06240 protein TldD 0.27 PGA1_c33480 protein PmbA — —
Dinoroseobacter shibae DFL-12 0.46 Dshi_1139 peptidase U62 modulator of DNA gyrase (RefSeq) 0.26 Dshi_0064 peptidase U62 modulator of DNA gyrase (RefSeq) low > 64
Parabacteroides merdae CL09T00C40 0.36 HMPREF1078_RS03620 TldD/PmbA family protein 0.16 HMPREF1078_RS03625 TldD/PmbA family protein 0.84 1
Bacteroides thetaiotaomicron VPI-5482 0.34 BT3648 putative modulator of DNA gyrase (NCBI ptt file) 0.17 BT3649 putative modulator of DNA gyrase (NCBI ptt file) 0.22 10
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS03165 TldD/PmbA family protein 0.17 HMPREF1181_RS03170 TldD/PmbA family protein low > 56
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_1127 tldD microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 0.08 Synpcc7942_1289 pmbA putative modulator of DNA gyrase 0.97 1

Not shown: 5 genomes with orthologs for ABZR87_RS01105 only; 0 genomes with orthologs for ABZR87_RS09660 only