| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS03825 | | MATE family efflux transporter | 1.0 | A4249_RS00635 | | carboxylating nicotinate-nucleotide diphosphorylase | 0.49 | 11 |
| Caulobacter crescentus NA1000 Δfur | 0.44 | CCNA_02099 | | Na+ driven multidrug efflux pump | 0.66 | CCNA_03009 | | nicotinate-nucleotide pyrophosphorylase | — | — |
| Caulobacter crescentus NA1000 | 0.44 | CCNA_02099 | | Na+ driven multidrug efflux pump | 0.66 | CCNA_03009 | | nicotinate-nucleotide pyrophosphorylase | — | — |
| Azospirillum sp. SherDot2 | 0.26 | MPMX19_01223 | | Multidrug resistance protein NorM | 0.51 | MPMX19_05672 | | putative nicotinate-nucleotide pyrophosphorylase [carboxylating] | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.19 | Echvi_2195 | | putative efflux protein, MATE family | 0.37 | Echvi_1158 | | nicotinate-nucleotide pyrophosphorylase | low | > 79 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.17 | CA265_RS09325 | | MATE family efflux transporter | 0.41 | CA265_RS14530 | | nicotinate-nucleotide diphosphorylase (carboxylating) | low | > 88 |
| Dyella japonica UNC79MFTsu3.2 | 0.17 | ABZR86_RS12525 | | MATE family efflux transporter | 0.40 | ABZR86_RS09850 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 74 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.16 | CA264_06370 | | MATE family efflux transporter | 0.38 | CA264_16940 | | nicotinate-nucleotide diphosphorylase (carboxylating) | — | — |
| Rhodanobacter denitrificans MT42 | 0.16 | LRK55_RS10790 | | MATE family efflux transporter | 0.38 | LRK55_RS13510 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.16 | LRK54_RS11085 | | MATE family efflux transporter | 0.38 | LRK54_RS13795 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 59 |
| Pseudomonas simiae WCS417 | 0.15 | PS417_07530 | | multidrug transporter | 0.37 | PS417_03925 | | nicotinate-nucleotide pyrophosphorylase | low | > 88 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.15 | ABZR88_RS09785 | | MATE family efflux transporter | 0.41 | ABZR88_RS15695 | | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Pseudomonas sp. S08-1 | 0.15 | OH686_02075 | | Na(+)/drug antiporter, MATE family of MDR efflux pumps | 0.37 | OH686_16520 | | nicotinate-nucleotide diphosphorylase (carboxylating) | low | > 80 |
| Enterobacter sp. TBS_079 | 0.15 | MPMX20_01973 | | Multidrug resistance protein MdtK | 0.33 | MPMX20_00800 | | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | low | > 85 |
| Vibrio cholerae E7946 ATCC 55056 | 0.15 | CSW01_07735 | | multidrug resistance protein NorM | 0.34 | CSW01_12265 | | carboxylating nicotinate-nucleotide diphosphorylase | 0.66 | 27 |
| Klebsiella michiganensis M5al | 0.15 | BWI76_RS16535 | | MATE family efflux transporter | 0.33 | BWI76_RS04845 | | nicotinate-nucleotide pyrophosphorylase | low | > 92 |
| Pseudomonas fluorescens FW300-N2C3 | 0.14 | AO356_02370 | | MATE family efflux transporter | 0.36 | AO356_07370 | | nicotinate-nucleotide pyrophosphorylase | low | > 104 |
| Kangiella aquimarina DSM 16071 | 0.14 | B158DRAFT_2495 | | putative efflux protein, MATE family | 0.35 | B158DRAFT_2135 | | nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) | — | — |
| Pseudomonas fluorescens SBW25 | 0.14 | PFLU_RS07610 | | MATE family efflux transporter | 0.37 | PFLU_RS03970 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.14 | PFLU_RS07610 | | MATE family efflux transporter | 0.37 | PFLU_RS03970 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 109 |
| Enterobacter asburiae PDN3 | 0.14 | EX28DRAFT_1660 | | putative efflux protein, MATE family | 0.33 | EX28DRAFT_3702 | | nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) | low | > 76 |
| Pseudomonas sp. RS175 | 0.14 | PFR28_01102 | | Multidrug resistance protein NorM | 0.39 | PFR28_00098 | | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | low | > 88 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.14 | GFF3613 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.36 | GFF130 | | Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) | low | > 78 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.14 | OHPLBJKB_02061 | | Multidrug resistance protein MdtK | 0.34 | OHPLBJKB_03552 | | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | low | > 73 |
| Escherichia coli BL21 | 0.14 | ECD_01634 | | multidrug efflux system transporter | 0.34 | ECD_00108 | | quinolinate phosphoribosyltransferase | low | > 61 |
| Escherichia coli ECRC98 | 0.14 | JDDGAC_01950 | mdtK | multidrug efflux MATE transporter MdtK | 0.33 | JDDGAC_14125 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | low | > 86 |
| Escherichia coli ECRC99 | 0.14 | KEDOAH_00750 | mdtK | multidrug efflux MATE transporter MdtK | 0.33 | KEDOAH_17625 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.14 | Pf1N1B4_3892 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.38 | Pf1N1B4_1153 | | Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) | low | > 87 |
| Escherichia coli Nissle 1917 | 0.14 | ECOLIN_RS09270 | | multidrug efflux MATE transporter MdtK | 0.33 | ECOLIN_RS00585 | | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Escherichia coli ECRC101 | 0.14 | MCAODC_18050 | mdtK | multidrug efflux MATE transporter MdtK | 0.33 | MCAODC_01045 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | low | > 87 |
| Escherichia coli BW25113 | 0.14 | b1663 | mdtK | multidrug efflux protein NorM (NCBI) | 0.34 | b0109 | nadC | nicotinate-nucleotide pyrophosphorylase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.14 | NIAGMN_00705 | mdtK | multidrug efflux MATE transporter MdtK | 0.33 | NIAGMN_08380 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Escherichia fergusonii Becca | 0.14 | EFB2_02329 | | Multidrug resistance protein MdtK | 0.33 | EFB2_03940 | | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | low | > 86 |
| Escherichia coli ECRC100 | 0.14 | OKFHMN_27360 | mdtK | multidrug efflux MATE transporter MdtK | 0.33 | OKFHMN_10530 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | low | > 80 |
| Escherichia coli ECOR38 | 0.14 | HEPCGN_05745 | mdtK | multidrug efflux MATE transporter MdtK | 0.33 | HEPCGN_08510 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | low | > 87 |
| Escherichia coli ECOR27 | 0.14 | NOLOHH_17880 | mdtK | multidrug efflux MATE transporter MdtK | 0.34 | NOLOHH_02875 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | low | > 75 |
| Escherichia coli ECRC62 | 0.14 | BNILDI_16670 | mdtK | multidrug efflux MATE transporter MdtK | 0.33 | BNILDI_08735 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | low | > 75 |
| Pseudomonas fluorescens FW300-N2E3 | 0.14 | AO353_00550 | | MATE family efflux transporter | 0.38 | AO353_05520 | | nicotinate-nucleotide pyrophosphorylase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.14 | Pf6N2E2_2298 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.37 | Pf6N2E2_3346 | | Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.14 | TX73_004890 | | MATE family efflux transporter | 0.50 | TX73_005415 | | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.14 | Psyr_0073 | | Multi antimicrobial extrusion protein MatE | 0.39 | Psyr_0815 | | nicotinate-nucleotide pyrophosphorylase (carboxylating) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.14 | Psyr_0073 | | Multi antimicrobial extrusion protein MatE | 0.39 | Psyr_0815 | | nicotinate-nucleotide pyrophosphorylase (carboxylating) | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.14 | PfGW456L13_4049 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.35 | PfGW456L13_5082 | | Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) | low | > 87 |
| Dickeya dianthicola ME23 | 0.14 | DZA65_RS13155 | | MATE family efflux transporter | 0.34 | DZA65_RS19035 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 75 |
| Serratia liquefaciens MT49 | 0.13 | IAI46_11210 | | MATE family efflux transporter | 0.35 | IAI46_03530 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 86 |
| Dickeya dianthicola 67-19 | 0.13 | HGI48_RS12700 | | MATE family efflux transporter | 0.34 | HGI48_RS17890 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.13 | HER17_RS09220 | | MATE family efflux transporter | 0.38 | HER17_RS03250 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 75 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.13 | Xcc-8004.4760.1 | | Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM | 0.30 | Xcc-8004.2009.1 | | Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.13 | MPMX26_00306 | | Multidrug resistance protein NorM | 0.35 | MPMX26_00042 | | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | low | > 36 |
| Pseudomonas stutzeri RCH2 | 0.13 | Psest_2549 | | putative efflux protein, MATE family | 0.39 | Psest_0718 | | nicotinate-nucleotide pyrophosphorylase | low | > 67 |
| Pantoea sp. MT58 | 0.13 | IAI47_10820 | | MATE family efflux transporter | 0.35 | IAI47_15845 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 76 |
| Rhizobium sp. OAE497 | 0.12 | ABIE40_RS12780 | | MATE family efflux transporter | 0.52 | ABIE40_RS23265 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 107 |
| Marinobacter adhaerens HP15 | 0.12 | HP15_3913 | | multidrug resistance protein NorM | 0.36 | HP15_1305 | | nicotinate-nucleotide pyrophosphorylase | — | — |
| Erwinia tracheiphila SCR3 | 0.12 | LU632_RS11170 | | MATE family efflux transporter | 0.35 | LU632_RS03040 | nadC | carboxylating nicotinate-nucleotide diphosphorylase | low | > 74 |
| Rahnella sp. WP5 | 0.12 | EX31_RS13855 | | MATE family efflux transporter | 0.36 | EX31_RS03515 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.12 | MIT1002_02233 | | Na(+)/drug antiporter | 0.37 | MIT1002_03008 | | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | — | — |
| Herbaspirillum seropedicae SmR1 | 0.12 | HSERO_RS04300 | | multidrug transporter MatE | 0.33 | HSERO_RS11070 | | nicotinate-nucleotide pyrophosphorylase | low | > 78 |
| Shewanella sp. ANA-3 | 0.12 | Shewana3_2039 | | MATE efflux family protein (RefSeq) | 0.32 | Shewana3_0422 | | nicotinate-nucleotide pyrophosphorylase [carboxylating] (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.12 | Shew_2037 | | MATE efflux family protein (RefSeq) | 0.35 | Shew_3435 | | nicotinate-nucleotide pyrophosphorylase (RefSeq) | — | — |
| Sinorhizobium meliloti 1021 | 0.12 | SMc01211 | | hypothetical protein | 0.42 | SMc02598 | | nicotinate-nucleotide pyrophosphorylase carboxylating protein | low | > 103 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.12 | BT3804 | | putative transport protein, multidrug efflux protein (NCBI ptt file) | 0.42 | BT1560 | | nicotinate-nucleotide pyrophosphorylase (NCBI ptt file) | — | — |
| Pseudomonas putida KT2440 | 0.12 | PP_5262 | | Probable multidrug resistance protein NorM | 0.36 | PP_0787 | | quinolinate phosphoribosyltransferase (decarboxylating) monomer | low | > 96 |
| Sphingomonas koreensis DSMZ 15582 | 0.12 | Ga0059261_2291 | | putative efflux protein, MATE family | 0.36 | Ga0059261_0061 | | nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) | — | — |
| Lysobacter sp. OAE881 | 0.11 | ABIE51_RS02170 | | MATE family efflux transporter | 0.32 | ABIE51_RS15405 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 62 |
| Ralstonia solanacearum PSI07 | 0.11 | RPSI07_RS18275 | | MATE family efflux transporter | 0.32 | RPSI07_RS12655 | | nicotinate-nucleotide diphosphorylase (carboxylating) | low | > 81 |
| Agrobacterium fabrum C58 | 0.11 | Atu2172 | | multidrug efflux protein | 0.48 | Atu4096 | | nicotinate-nucleotide pyrophosphorylase | low | > 89 |
| Ralstonia solanacearum GMI1000 | 0.11 | RS_RS05915 | | MATE family efflux transporter | 0.31 | RS_RS12290 | | nicotinate-nucleotide diphosphorylase (carboxylating) | 0.29 | 39 |
| Paraburkholderia graminis OAS925 | 0.11 | ABIE53_002038 | | MATE family multidrug resistance protein | 0.32 | ABIE53_003293 | | nicotinate-nucleotide pyrophosphorylase (carboxylating) | low | > 113 |
| Shewanella amazonensis SB2B | 0.11 | Sama_1761 | | MATE efflux family protein (RefSeq) | 0.35 | Sama_0371 | | nicotinate-nucleotide diphosphorylase (carboxylating) (RefSeq) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.11 | DVU1217 | | MATE efflux family protein (TIGR) | 0.30 | DVU1807 | nadC | nicotinate-nucleotide pyrophosphorylase (TIGR) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.11 | RALBFv3_RS15100 | | MATE family efflux transporter | 0.32 | RALBFv3_RS04730 | | nicotinate-nucleotide diphosphorylase (carboxylating) | low | > 76 |
| Ralstonia solanacearum UW163 | 0.11 | UW163_RS12570 | | MATE family efflux transporter | 0.32 | UW163_RS08940 | | nicotinate-nucleotide diphosphorylase (carboxylating) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.11 | ABZR87_RS10730 | | MATE family efflux transporter | 0.33 | ABZR87_RS00350 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 80 |
| Bacteroides stercoris CC31F | 0.11 | HMPREF1181_RS00200 | | MATE family efflux transporter | 0.43 | HMPREF1181_RS10745 | | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.11 | H281DRAFT_00822 | | multidrug resistance protein, MATE family | 0.32 | H281DRAFT_04070 | | nicotinate-nucleotide pyrophosphorylase [carboxylating] | low | > 103 |
| Synechococcus elongatus PCC 7942 | 0.10 | Synpcc7942_1699 | | MATE efflux family protein | 0.34 | Synpcc7942_0951 | nadC | nicotinate-nucleotide pyrophosphorylase | low | > 38 |
| Burkholderia phytofirmans PsJN | 0.10 | BPHYT_RS14600 | | multidrug transporter MatE | 0.33 | BPHYT_RS15645 | | nicotinate-nucleotide pyrophosphorylase | 0.22 | 38 |
| Paraburkholderia sabiae LMG 24235 | 0.10 | QEN71_RS04380 | | MATE family efflux transporter | 0.33 | QEN71_RS03065 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 153 |
| Bosea sp. OAE506 | 0.10 | ABIE41_RS08515 | | MATE family efflux transporter | 0.46 | ABIE41_RS02500 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 77 |
| Cupriavidus basilensis FW507-4G11 | 0.10 | RR42_RS13335 | | multidrug transporter MatE | 0.46 | RR42_RS21245 | | nicotinate-nucleotide pyrophosphorylase | low | > 128 |
| Bacteroides ovatus ATCC 8483 | 0.10 | BACOVA_03694 | | MATE efflux family protein | 0.43 | BACOVA_04303 | | nicotinate-nucleotide diphosphorylase (carboxylating) | low | > 94 |
| Dechlorosoma suillum PS | 0.10 | Dsui_1442 | | putative efflux protein, MATE family | 0.37 | Dsui_2901 | | nicotinate-nucleotide pyrophosphorylase | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.10 | HMPREF1058_RS02770 | | MATE family efflux transporter | 0.41 | HMPREF1058_RS15940 | | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Phocaeicola dorei CL03T12C01 | 0.10 | ABI39_RS02110 | | MATE family efflux transporter | 0.41 | ABI39_RS11900 | | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Rhodospirillum rubrum S1H | 0.09 | Rru_A0697 | | Multi antimicrobial extrusion protein MatE (NCBI) | 0.52 | Rru_A1432 | | Nicotinate-nucleotide pyrophosphorylase (NCBI) | low | > 58 |
| Parabacteroides merdae CL09T00C40 | 0.09 | HMPREF1078_RS10360 | | MATE family efflux transporter | 0.42 | HMPREF1078_RS16725 | | carboxylating nicotinate-nucleotide diphosphorylase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.09 | PGA1_c21310 | | multidrug resistance protein NorM | 0.46 | PGA1_c27810 | | nicotinate-nucleotide pyrophosphorylase | low | > 62 |
| Dickeya dadantii 3937 | 0.08 | DDA3937_RS13645 | | MATE family efflux transporter | 0.35 | DDA3937_RS17955 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.08 | ABCV34_RS00895 | | MATE family efflux transporter | 0.35 | ABCV34_RS03695 | | carboxylating nicotinate-nucleotide diphosphorylase | low | > 48 |
Not shown: 4 genomes with orthologs for A4249_RS03825 only; 11 genomes with orthologs for A4249_RS00635 only