| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dinoroseobacter shibae DFL-12 | 1.0 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | 1.0 | Dshi_0847 | | Dihydroorotate oxidase (RefSeq) | 0.73 | 9 |
| Rhodospirillum rubrum S1H | 0.80 | Rru_A1190 | | 3-isopropylmalate dehydratase small subunit region (NCBI) | 0.45 | Rru_A0514 | | Dihydroorotate dehydrogenase 2 (NCBI) | 0.72 | 18 |
| Azospirillum sp. SherDot2 | 0.80 | MPMX19_00606 | | 3-isopropylmalate dehydratase small subunit 1 | 0.48 | MPMX19_02083 | | Dihydroorotate dehydrogenase (quinone) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.79 | AMB_RS20565 | | 3-isopropylmalate dehydratase small subunit | 0.46 | AMB_RS19685 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Sinorhizobium meliloti 1021 | 0.79 | SMc03795 | | isopropylmalate isomerase small subunit | 0.46 | SMc02245 | | dihydroorotate dehydrogenase 2 | 0.84 | 58 |
| Rhizobium sp. OAE497 | 0.79 | ABIE40_RS19040 | | 3-isopropylmalate dehydratase small subunit | 0.44 | ABIE40_RS02420 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.78 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | 0.72 | PGA1_c12150 | | dihydroorotate dehydrogenase PyrD | 0.86 | 20 |
| Azospirillum brasilense Sp245 | 0.77 | AZOBR_RS14135 | | isopropylmalate isomerase | 0.45 | AZOBR_RS13520 | | dihydroorotate dehydrogenase | 0.70 | 30 |
| Agrobacterium fabrum C58 | 0.77 | Atu2790 | | 3-isopropylmalate dehydratase, small subunit | 0.45 | Atu0486 | | dihydroorotate dehydrogenase | 0.83 | 44 |
| Rhodopseudomonas palustris CGA009 | 0.75 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | 0.42 | TX73_004110 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Bosea sp. OAE506 | 0.74 | ABIE41_RS11640 | | 3-isopropylmalate dehydratase small subunit | 0.42 | ABIE41_RS24065 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Acinetobacter radioresistens SK82 | 0.61 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | 0.34 | MPMX26_01120 | | Dihydroorotate dehydrogenase (quinone) | low | > 36 |
| Pseudomonas stutzeri RCH2 | 0.60 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | 0.37 | Psest_1947 | | dihydroorotate dehydrogenase, subfamily 2 | 0.41 | 62 |
| Pseudomonas putida KT2440 | 0.59 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.34 | PP_2095 | | Dihydroorotate dehydrogenase (quinone) | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | 0.35 | UW163_RS14880 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Pseudomonas sp. S08-1 | 0.59 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.36 | OH686_03120 | | dihydroorotate dehydrogenase (fumarate) | — | — |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | 0.38 | ABID97_RS14065 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | 0.35 | RALBFv3_RS01570 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_3947 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.35 | PfGW456L13_4095 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
| Pseudomonas simiae WCS417 | 0.59 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.35 | PS417_20935 | | dihydroorotate dehydrogenase | — | — |
| Pseudomonas sp. RS175 | 0.59 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.35 | PFR28_01054 | | Dihydroorotate dehydrogenase (quinone) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_14 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.35 | Pf1N1B4_3842 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
| Dechlorosoma suillum PS | 0.59 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | 0.39 | Dsui_2978 | | dihydroorotate dehydrogenase, subfamily 2 | — | — |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | 0.35 | RPSI07_RS15920 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_20625 | | 3-isopropylmalate dehydratase | 0.34 | AO353_00780 | | dihydroorotate dehydrogenase (quinone) | — | — |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.36 | BPHYT_RS08565 | | dihydroorotate dehydrogenase | 0.45 | 99 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.34 | Psyr_2106 | | dihydroorotate oxidase A | — | — |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.35 | PFLU_RS22550 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.58 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.45 | CCNA_00562 | | dihydroorotate dehydrogenase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.58 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.45 | CCNA_00562 | | dihydroorotate dehydrogenase | 0.88 | 53 |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.35 | PFLU_RS22550 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.34 | Psyr_2106 | | dihydroorotate oxidase A | — | — |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | 0.35 | RS_RS08160 | | dihydroorotate dehydrogenase (quinone) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.35 | Pf6N2E2_2347 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | 0.34 | H281DRAFT_00743 | | dihydroorotate oxidase A | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.35 | GFF4211 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | low | > 90 |
| Kangiella aquimarina DSM 16071 | 0.58 | B158DRAFT_1320 | | 3-isopropylmalate dehydratase, small subunit | 0.35 | B158DRAFT_2228 | | dihydroorotate oxidase A (EC 1.3.3.1) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.58 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.35 | ABZR87_RS13360 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Variovorax sp. SCN45 | 0.58 | GFF3889 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.37 | GFF960 | | Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.35 | QEN71_RS22765 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.35 | AO356_02610 | | dihydroorotate dehydrogenase (quinone) | — | — |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.37 | Ac3H11_4100 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | 0.36 | ABIE53_001954 | | dihydroorotate dehydrogenase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.56 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.34 | Xcc-8004.3032.1 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | 0.35 | HSERO_RS16155 | | dihydroorotate dehydrogenase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS14390 | | 3-isopropylmalate dehydratase | 0.35 | RR42_RS07465 | | dihydroorotate dehydrogenase | — | — |
| Castellaniella sp019104865 MT123 | 0.54 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | 0.37 | ABCV34_RS07790 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Serratia liquefaciens MT49 | 0.53 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | 0.32 | IAI46_08805 | | quinone-dependent dihydroorotate dehydrogenase | low | > 86 |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.34 | DZA65_RS13390 | | quinone-dependent dihydroorotate dehydrogenase | 0.84 | 15 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | 0.34 | DDA3937_RS12855 | | quinone-dependent dihydroorotate dehydrogenase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | 0.34 | HGI48_RS12925 | | quinone-dependent dihydroorotate dehydrogenase | 0.74 | 27 |
| Pantoea sp. MT58 | 0.52 | IAI47_16015 | | 3-isopropylmalate dehydratase small subunit | 0.33 | IAI47_12705 | | quinone-dependent dihydroorotate dehydrogenase | 0.77 | 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | 0.32 | CSW01_07490 | | dihydroorotate dehydrogenase (quinone) | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | 0.33 | HER17_RS12005 | | quinone-dependent dihydroorotate dehydrogenase | 0.94 | 46 |
| Shewanella loihica PV-4 | 0.51 | Shew_3469 | | isopropylmalate isomerase small subunit (RefSeq) | 0.34 | Shew_1810 | | dihydroorotate dehydrogenase 2 (RefSeq) | low | > 60 |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 0.32 | BWI76_RS09910 | | dihydroorotate dehydrogenase (quinone) | 0.61 | 77 |
| Shewanella oneidensis MR-1 | 0.51 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.35 | SO2592 | pyrD | dihydroorotate dehydrogenase (NCBI ptt file) | low | > 76 |
| Escherichia coli BL21 | 0.50 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 0.32 | ECD_00949 | | dihydro-orotate oxidase, FMN-linked | low | > 60 |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.34 | Shewana3_1786 | | dihydroorotate dehydrogenase 2 (RefSeq) | low | > 73 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | 0.32 | OHPLBJKB_02721 | | Dihydroorotate dehydrogenase (quinone) | low | > 73 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 0.32 | NOLOHH_21850 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 57 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.33 | EX28DRAFT_1998 | | dihydroorotate oxidase A (EC 1.3.3.1) | — | — |
| Escherichia coli BW25113 | 0.50 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 0.32 | b0945 | pyrD | dihydroorotate dehydrogenase (NCBI) | 0.75 | 70 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 0.32 | BNILDI_20015 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Erwinia tracheiphila SCR3 | 0.50 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | 0.33 | LU632_RS09955 | pyrD | quinone-dependent dihydroorotate dehydrogenase | 0.76 | 24 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF167 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.33 | GFF3236 | | Dihydroorotate dehydrogenase (EC 1.3.3.1) | low | > 78 |
| Shewanella amazonensis SB2B | 0.50 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.33 | Sama_1593 | | dihydroorotate dehydrogenase 2 (RefSeq) | low | > 62 |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | 0.33 | ECOLIN_RS04965 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 0.32 | JDDGAC_08905 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 0.33 | HEPCGN_23225 | pyrD | quinone-dependent dihydroorotate dehydrogenase | low | > 85 |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | 0.32 | KEDOAH_22440 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Escherichia coli ECRC101 | 0.50 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 0.32 | OKFHMN_05295 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | 0.32 | NIAGMN_03015 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Escherichia fergusonii Becca | 0.50 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | 0.33 | EFB2_03126 | | Dihydroorotate dehydrogenase (quinone) | low | > 86 |
| Escherichia coli ECRC101 | 0.50 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | 0.32 | MCAODC_24685 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Rahnella sp. WP5 | 0.50 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | 0.32 | EX31_RS18095 | | quinone-dependent dihydroorotate dehydrogenase | 0.92 | 50 |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.33 | MPMX20_01596 | | Dihydroorotate dehydrogenase (quinone) | 0.71 | 63 |
| Sphingomonas koreensis DSMZ 15582 | 0.46 | Ga0059261_4225 | | 3-isopropylmalate dehydratase, small subunit | 0.37 | Ga0059261_1468 | | dihydroorotate oxidase A (EC 1.3.3.1) | — | — |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.38 | MIT1002_02035 | | Dihydroorotate dehydrogenase (quinone) | low | > 70 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.45 | CA264_09440 | | 3-isopropylmalate dehydratase small subunit | 0.38 | CA264_00865 | | dihydroorotate dehydrogenase (quinone) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.43 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.35 | ABZR86_RS07450 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS09970 | | 3-isopropylmalate dehydratase small subunit | 0.37 | LRK55_RS15740 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.42 | CA265_RS15840 | | 3-isopropylmalate dehydratase small subunit | 0.37 | CA265_RS14005 | | dihydroorotate dehydrogenase (quinone) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_13590 | leuD | 3-isopropylmalate dehydratase small subunit | 0.37 | OKGIIK_09010 | pyrD | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS10330 | | 3-isopropylmalate dehydratase small subunit | 0.37 | LRK54_RS15985 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.42 | ABZR88_RS11600 | | 3-isopropylmalate dehydratase small subunit | 0.38 | ABZR88_RS12040 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.41 | Echvi_2060 | | 3-isopropylmalate dehydratase, small subunit | 0.37 | Echvi_1806 | | dihydroorotate dehydrogenase, subfamily 2 | — | — |
| Bifidobacterium breve UCC2003 | 0.40 | BBR_RS19625 | | 3-isopropylmalate dehydratase small subunit | 0.21 | BBR_RS12895 | | quinone-dependent dihydroorotate dehydrogenase | low | > 34 |
| Lysobacter sp. OAE881 | 0.40 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | 0.32 | ABIE51_RS13725 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.40 | A4249_RS10000 | | 3-isopropylmalate dehydratase small subunit | 0.44 | A4249_RS00280 | | quinone-dependent dihydroorotate dehydrogenase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.34 | Rv2987c | | Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | 0.34 | Rv2139 | | Probable dihydroorotate dehydrogenase PyrD | — | — |
Not shown: 7 genomes with orthologs for Dshi_0083 only; 1 genomes with orthologs for Dshi_0847 only