Conservation of cofitness between BT3760 and BT2078 in Bacteroides thetaiotaomicron VPI-5482

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT3760 arginosuccinate synthetase (EC 6.3.4.5) (from data) 1.0 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.89 20
Bacteroides ovatus ATCC 8483 0.99 BACOVA_03590 putative argininosuccinate synthase 0.94 BACOVA_03302 dihydroxy-acid dehydratase 0.95 13
Phocaeicola dorei CL03T12C01 0.97 ABI39_RS02975 argininosuccinate synthase 0.88 ABI39_RS12715 dihydroxy-acid dehydratase 0.80 24
Phocaeicola vulgatus CL09T03C04 0.97 HMPREF1058_RS08845 argininosuccinate synthase 0.89 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.71 43
Bacteroides stercoris CC31F 0.95 HMPREF1181_RS03460 argininosuccinate synthase 0.91 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.87 45
Parabacteroides merdae CL09T00C40 0.92 HMPREF1078_RS10575 argininosuccinate synthase 0.83 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.57 Echvi_3846 argininosuccinate synthase 0.28 Echvi_2055 dihydroxy-acid dehydratase 0.95 7
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_06255 argininosuccinate synthase 0.27 CA264_06935 dihydroxy-acid dehydratase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.55 CA265_RS18545 argininosuccinate synthase 0.26 CA265_RS15795 dihydroxy-acid dehydratase 0.95 16
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS15515 argininosuccinate synthase 0.28 ABZR88_RS11575 dihydroxy-acid dehydratase — —
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.26 ABZR86_RS15945 dihydroxy-acid dehydratase 0.93 40
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) 0.63 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.88 14
Lysobacter sp. OAE881 0.24 ABIE51_RS13405 argininosuccinate synthase 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.98 18
Methanococcus maripaludis S2 0.24 MMP_RS00425 argininosuccinate synthase 0.33 MMP_RS01700 dihydroxy-acid dehydratase — —
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_09465 argG argininosuccinate synthase 0.26 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Rhodanobacter denitrificans MT42 0.24 LRK55_RS02155 argininosuccinate synthase 0.25 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS02400 argininosuccinate synthase 0.25 LRK54_RS10320 dihydroxy-acid dehydratase 0.84 14
Methanococcus maripaludis JJ 0.23 MMJJ_RS05060 argininosuccinate synthase 0.33 MMJJ_RS03675 dihydroxy-acid dehydratase — —
Synechococcus elongatus PCC 7942 0.22 Synpcc7942_0009 argG argininosuccinate synthase 0.65 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase — —
Pseudomonas putida KT2440 0.21 PP_1088 Argininosuccinate synthase 0.63 PP_5128 Dihydroxy-acid dehydratase 0.88 10
Bifidobacterium breve UCC2003 0.21 BBR_RS13915 argininosuccinate synthase 0.56 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Marinobacter adhaerens HP15 0.21 HP15_2367 argininosuccinate synthase 0.61 HP15_595 dihydroxy-acid dehydratase — —
Erwinia tracheiphila SCR3 0.21 LU632_RS19605 argininosuccinate synthase 0.62 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.68 41
Pseudomonas stutzeri RCH2 0.21 Psest_3121 argininosuccinate synthase 0.64 Psest_0234 dihydroxy-acid dehydratase — —
Sinorhizobium meliloti 1021 0.20 SMc03826 argininosuccinate synthase 0.65 SMc04045 dihydroxy-acid dehydratase 0.77 25
Dinoroseobacter shibae DFL-12 0.20 Dshi_3472 Argininosuccinate synthase (RefSeq) 0.31 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Rhizobium sp. OAE497 0.20 ABIE40_RS18150 argininosuccinate synthase 0.64 ABIE40_RS08005 dihydroxy-acid dehydratase — —
Pseudomonas sp. S08-1 0.20 OH686_03930 argininosuccinate synthase 0.64 OH686_14100 dihydroxy-acid dehydratase 0.69 41
Pantoea sp. MT58 0.20 IAI47_00915 argininosuccinate synthase 0.62 IAI47_01035 dihydroxy-acid dehydratase 0.98 6
Serratia liquefaciens MT49 0.20 IAI46_24505 argininosuccinate synthase 0.62 IAI46_24345 dihydroxy-acid dehydratase 0.83 30
Pseudomonas sp. RS175 0.20 PFR28_03353 Argininosuccinate synthase 0.63 PFR28_04278 Dihydroxy-acid dehydratase — —
Shewanella loihica PV-4 0.20 Shew_0205 argininosuccinate synthase (RefSeq) 0.61 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.97 24
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 1.00 2
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS14275 argininosuccinate synthase 0.24 A4249_RS10030 dihydroxy-acid dehydratase 0.99 16
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) 0.63 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.76 48
Shewanella amazonensis SB2B 0.20 Sama_0259 argininosuccinate synthase (RefSeq) 0.61 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.96 7
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS05725 argininosuccinate synthase 0.63 PFLU_RS28535 dihydroxy-acid dehydratase — —
Agrobacterium fabrum C58 0.19 Atu2667 argininosuccinate synthase 0.64 Atu1918 dihydroxy-acid dehydratase — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU1095 argG argininosuccinate synthase (TIGR) 0.40 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.86 29
Pseudomonas fluorescens SBW25 0.19 PFLU_RS05725 argininosuccinate synthase 0.63 PFLU_RS28535 dihydroxy-acid dehydratase — —
Shewanella oneidensis MR-1 0.19 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.61 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.96 12
Shewanella sp. ANA-3 0.19 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.61 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.93 7
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) 0.63 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.90 1
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_04105 argininosuccinate synthase 0.63 AO353_08345 dihydroxy-acid dehydratase 0.90 4
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_18325 argininosuccinate synthase 0.63 AO356_13250 dihydroxy-acid dehydratase 0.96 5
Pseudomonas simiae WCS417 0.19 PS417_05640 argininosuccinate synthase 0.63 PS417_26890 dihydroxy-acid dehydratase — —
Phaeobacter inhibens DSM 17395 0.19 PGA1_c34920 argininosuccinate synthase ArgG 0.61 PGA1_c29490 dihydroxy-acid dehydratase LivD — —
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) 0.63 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_0047 argininosuccinate synthase (RefSeq) 0.39 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.88 27
Alteromonas macleodii MIT1002 0.19 MIT1002_00468 Argininosuccinate synthase 0.63 MIT1002_04041 Dihydroxy-acid dehydratase 0.98 17
Dechlorosoma suillum PS 0.19 Dsui_3248 argininosuccinate synthase 0.66 Dsui_1122 dihydroxy-acid dehydratase — —
Magnetospirillum magneticum AMB-1 0.19 AMB_RS05720 argininosuccinate synthase 0.62 AMB_RS12770 dihydroxy-acid dehydratase — —
Rhodospirillum rubrum S1H 0.19 Rru_A3751 Argininosuccinate synthase (NCBI) 0.59 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) 0.96 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_3892 argininosuccinate synthase 0.62 Psyr_0469 dihydroxyacid dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_3892 argininosuccinate synthase 0.62 Psyr_0469 dihydroxyacid dehydratase — —
Azospirillum brasilense Sp245 0.19 AZOBR_RS00785 argininosuccinate synthase 0.62 AZOBR_RS15015 dihydroxy-acid dehydratase — —
Caulobacter crescentus NA1000 0.19 CCNA_00128 argininosuccinate synthase 0.62 CCNA_03139 dihydroxy-acid dehydratase — —
Azospirillum sp. SherDot2 0.19 MPMX19_02369 Argininosuccinate synthase 0.61 MPMX19_05356 Dihydroxy-acid dehydratase — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00128 argininosuccinate synthase 0.62 CCNA_03139 dihydroxy-acid dehydratase low > 67
Mycobacterium tuberculosis H37Rv 0.19 Rv1658 Probable argininosuccinate synthase ArgG 0.29 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) — —
Bosea sp. OAE506 0.18 ABIE41_RS00340 argininosuccinate synthase 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase — —
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS17170 argininosuccinate synthase 0.30 RR42_RS16210 dihydroxy-acid dehydratase — —
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_13370 argininosuccinate synthase 0.62 CSW01_00140 dihydroxy-acid dehydratase low > 62
Paraburkholderia bryophila 376MFSha3.1 0.17 H281DRAFT_04120 argininosuccinate synthase 0.63 H281DRAFT_05312 dihydroxyacid dehydratase low > 103
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS15920 argininosuccinate synthase 0.63 BPHYT_RS10100 dihydroxy-acid dehydratase 0.81 44
Paraburkholderia graminis OAS925 0.17 ABIE53_003355 argininosuccinate synthase 0.62 ABIE53_006513 dihydroxy-acid dehydratase — —
Rhodopseudomonas palustris CGA009 0.10 TX73_002040 argininosuccinate synthase 0.62 TX73_007515 dihydroxy-acid dehydratase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.10 GFF294 Argininosuccinate synthase (EC 6.3.4.5) 0.55 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Klebsiella michiganensis M5al 0.08 BWI76_RS25115 argininosuccinate synthase 0.64 BWI76_RS00975 dihydroxy-acid dehydratase 0.92 5

Not shown: 1 genomes with orthologs for BT3760 only; 33 genomes with orthologs for BT2078 only