Conservation of cofitness between BT3760 and BT1857 in Bacteroides thetaiotaomicron VPI-5482

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT3760 arginosuccinate synthetase (EC 6.3.4.5) (from data) 1.0 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.90 15
Bacteroides ovatus ATCC 8483 0.99 BACOVA_03590 putative argininosuccinate synthase 0.99 BACOVA_04600 3-isopropylmalate dehydrogenase 0.94 20
Phocaeicola dorei CL03T12C01 0.97 ABI39_RS02975 argininosuccinate synthase 0.96 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.76 34
Phocaeicola vulgatus CL09T03C04 0.97 HMPREF1058_RS08845 argininosuccinate synthase 0.96 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.72 39
Bacteroides stercoris CC31F 0.95 HMPREF1181_RS03460 argininosuccinate synthase 0.93 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.89 33
Parabacteroides merdae CL09T00C40 0.92 HMPREF1078_RS10575 argininosuccinate synthase 0.91 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.97 34
Echinicola vietnamensis KMM 6221, DSM 17526 0.57 Echvi_3846 argininosuccinate synthase 0.57 Echvi_2062 3-isopropylmalate dehydrogenase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_06255 argininosuccinate synthase 0.55 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.55 CA265_RS18545 argininosuccinate synthase 0.48 CA265_RS15850 3-isopropylmalate dehydrogenase 0.95 21
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS15515 argininosuccinate synthase 0.48 ABZR88_RS11605 3-isopropylmalate dehydrogenase — —
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) 0.38 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 40
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.40 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.93 46
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) 0.41 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.81 24
Lysobacter sp. OAE881 0.24 ABIE51_RS13405 argininosuccinate synthase 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.97 22
Methanococcus maripaludis S2 0.24 MMP_RS00425 argininosuccinate synthase 0.28 MMP_RS04575 homoisocitrate dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_09465 argG argininosuccinate synthase 0.42 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS02400 argininosuccinate synthase 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.89 5
Rhodanobacter denitrificans MT42 0.24 LRK55_RS02155 argininosuccinate synthase 0.41 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Methanococcus maripaludis JJ 0.23 MMJJ_RS05060 argininosuccinate synthase 0.28 MMJJ_RS00560 homoisocitrate dehydrogenase — —
Synechococcus elongatus PCC 7942 0.22 Synpcc7942_0009 argG argininosuccinate synthase 0.39 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase — —
Pseudomonas putida KT2440 0.21 PP_1088 Argininosuccinate synthase 0.42 PP_1988 3-isopropylmalate dehydrogenase 0.86 13
Bifidobacterium breve UCC2003 0.21 BBR_RS13915 argininosuccinate synthase 0.27 BBR_RS12870 3-isopropylmalate dehydrogenase low > 34
Erwinia tracheiphila SCR3 0.21 LU632_RS19605 argininosuccinate synthase 0.38 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.86 12
Marinobacter adhaerens HP15 0.21 HP15_2367 argininosuccinate synthase 0.40 HP15_1832 3-isopropylmalate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.21 Psest_3121 argininosuccinate synthase 0.42 Psest_2589 3-isopropylmalate dehydrogenase — —
Sinorhizobium meliloti 1021 0.20 SMc03826 argininosuccinate synthase 0.33 SMc04405 3-isopropylmalate dehydrogenase 0.77 33
Dinoroseobacter shibae DFL-12 0.20 Dshi_3472 Argininosuccinate synthase (RefSeq) 0.33 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) — —
Rhizobium sp. OAE497 0.20 ABIE40_RS18150 argininosuccinate synthase 0.33 ABIE40_RS19050 3-isopropylmalate dehydrogenase — —
Pseudomonas sp. S08-1 0.20 OH686_03930 argininosuccinate synthase 0.41 OH686_04470 3-isopropylmalate dehydrogenase 0.78 18
Serratia liquefaciens MT49 0.20 IAI46_24505 argininosuccinate synthase 0.41 IAI46_03350 3-isopropylmalate dehydrogenase 0.69 50
Pantoea sp. MT58 0.20 IAI47_00915 argininosuccinate synthase 0.39 IAI47_16005 3-isopropylmalate dehydrogenase 0.97 15
Pseudomonas sp. RS175 0.20 PFR28_03353 Argininosuccinate synthase 0.42 PFR28_02821 3-isopropylmalate dehydrogenase — —
Shewanella loihica PV-4 0.20 Shew_0205 argininosuccinate synthase (RefSeq) 0.39 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.98 19
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) 0.36 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.97 32
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) 0.42 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.85 10
Shewanella amazonensis SB2B 0.20 Sama_0259 argininosuccinate synthase (RefSeq) 0.40 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.94 21
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS14275 argininosuccinate synthase 0.43 A4249_RS09995 3-isopropylmalate dehydrogenase 1.00 5
Agrobacterium fabrum C58 0.19 Atu2667 argininosuccinate synthase 0.33 Atu2791 3-isopropylmalate dehydrogenase — —
Shewanella oneidensis MR-1 0.19 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.40 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.95 18
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU1095 argG argininosuccinate synthase (TIGR) 0.43 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.90 13
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS05725 argininosuccinate synthase 0.41 PFLU_RS20565 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.19 PFLU_RS05725 argininosuccinate synthase 0.41 PFLU_RS20565 3-isopropylmalate dehydrogenase — —
Shewanella sp. ANA-3 0.19 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.40 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.90 23
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_04105 argininosuccinate synthase 0.42 AO353_20635 3-isopropylmalate dehydrogenase 0.89 7
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) 0.42 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_18325 argininosuccinate synthase 0.42 AO356_21415 3-isopropylmalate dehydrogenase 0.92 19
Pseudomonas simiae WCS417 0.19 PS417_05640 argininosuccinate synthase 0.41 PS417_18585 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) 0.42 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.82 16
Phaeobacter inhibens DSM 17395 0.19 PGA1_c34920 argininosuccinate synthase ArgG 0.35 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB — —
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_0047 argininosuccinate synthase (RefSeq) 0.47 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.95 10
Alteromonas macleodii MIT1002 0.19 MIT1002_00468 Argininosuccinate synthase 0.38 MIT1002_00948 3-isopropylmalate dehydrogenase 0.96 33
Magnetospirillum magneticum AMB-1 0.19 AMB_RS05720 argininosuccinate synthase 0.36 AMB_RS20570 3-isopropylmalate dehydrogenase — —
Dechlorosoma suillum PS 0.19 Dsui_3248 argininosuccinate synthase 0.41 Dsui_3198 3-isopropylmalate dehydrogenase — —
Rhodospirillum rubrum S1H 0.19 Rru_A3751 Argininosuccinate synthase (NCBI) 0.35 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.93 13
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_3892 argininosuccinate synthase 0.42 Psyr_1985 3-isopropylmalate dehydrogenase — —
Azospirillum brasilense Sp245 0.19 AZOBR_RS00785 argininosuccinate synthase 0.36 AZOBR_RS14130 3-isopropylmalate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_3892 argininosuccinate synthase 0.42 Psyr_1985 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 0.19 CCNA_00128 argininosuccinate synthase 0.32 CCNA_00193 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00128 argininosuccinate synthase 0.32 CCNA_00193 3-isopropylmalate dehydrogenase low > 67
Mycobacterium tuberculosis H37Rv 0.19 Rv1658 Probable argininosuccinate synthase ArgG 0.25 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) — —
Azospirillum sp. SherDot2 0.19 MPMX19_02369 Argininosuccinate synthase 0.36 MPMX19_00607 3-isopropylmalate dehydrogenase — —
Bosea sp. OAE506 0.18 ABIE41_RS00340 argininosuccinate synthase 0.34 ABIE41_RS11860 3-isopropylmalate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS17170 argininosuccinate synthase 0.37 RR42_RS14385 3-isopropylmalate dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_13370 argininosuccinate synthase 0.41 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Paraburkholderia bryophila 376MFSha3.1 0.17 H281DRAFT_04120 argininosuccinate synthase 0.38 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.67 12
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS15920 argininosuccinate synthase 0.38 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.93 10
Paraburkholderia graminis OAS925 0.17 ABIE53_003355 argininosuccinate synthase 0.37 ABIE53_004804 3-isopropylmalate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.10 TX73_002040 argininosuccinate synthase 0.32 TX73_001175 3-isopropylmalate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.10 GFF294 Argininosuccinate synthase (EC 6.3.4.5) 0.40 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Klebsiella michiganensis M5al 0.08 BWI76_RS25115 argininosuccinate synthase 0.43 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.88 20

Not shown: 0 genomes with orthologs for BT3760 only; 33 genomes with orthologs for BT1857 only