Conservation of cofitness between DVU3010 and DVU1609 in Desulfovibrio vulgaris Hildenborough JW710

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Desulfovibrio vulgaris Hildenborough JW710 1.0 DVU3010 lpsC aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) 1.0 DVU1609 dapB dihydrodipicolinate reductase (TIGR) 0.36 18
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase 0.34 RR42_RS17550 4-hydroxy-tetrahydrodipicolinate reductase
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.29 OKGIIK_07315 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.39 Psyr_4193 dihydrodipicolinate reductase
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.39 Psyr_4193 dihydrodipicolinate reductase
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 0.38 AO353_05640 4-hydroxy-tetrahydrodipicolinate reductase
Variovorax sp. OAS795 0.35 ABID97_RS02145 DegT/DnrJ/EryC1/StrS family aminotransferase 0.39 ABID97_RS04515 4-hydroxy-tetrahydrodipicolinate reductase
Enterobacter sp. TBS_079 0.35 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.37 MPMX20_00738 4-hydroxy-tetrahydrodipicolinate reductase
Erwinia tracheiphila HP pepo 2.2 0.35 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.38 IJEDHG_06130 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Erwinia tracheiphila SCR3 0.35 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.38 LU632_RS02760 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Enterobacter asburiae PDN3 0.34 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.38 EX28DRAFT_3636 dihydrodipicolinate reductase (EC 1.3.1.26)
Pseudomonas sp. RS175 0.34 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.39 PFR28_00075 4-hydroxy-tetrahydrodipicolinate reductase
Erwinia amylovora T8 0.34 OLJFJH_17365 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.34 OLJFJH_01405 4-hydroxy-tetrahydrodipicolinate reductase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.39 GFF216 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)
Dickeya dianthicola ME23 0.34 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.35 DZA65_RS19390 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase 0.39 Pf1N1B4_1174 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)
Klebsiella pneumoniae MKP103 0.34 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.37 KDGMDA_12700 4-hydroxy-tetrahydrodipicolinate reductase
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS10435 aminotransferase DegT 0.39 HSERO_RS03030 dihydrodipicolinate reductase
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.39 H281DRAFT_06318 dihydrodipicolinate reductase
Dickeya dianthicola 67-19 0.33 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.35 HGI48_RS18250 4-hydroxy-tetrahydrodipicolinate reductase
Dickeya dadantii 3937 0.33 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.37 DDA3937_RS18315 4-hydroxy-tetrahydrodipicolinate reductase
Klebsiella michiganensis M5al 0.33 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.38 BWI76_RS04460 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas sp. DMC3 0.33 GFF2433 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.41 GFF4975 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas stutzeri RCH2 0.33 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.39 Psest_0966 dihydrodipicolinate reductase
Pectobacterium carotovorum WPP14 0.33 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.39 HER17_RS02890 4-hydroxy-tetrahydrodipicolinate reductase
Serratia liquefaciens MT49 0.33 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.37 IAI46_03185 4-hydroxy-tetrahydrodipicolinate reductase
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.37 PagCFBP13505_RS12870 4-hydroxy-tetrahydrodipicolinate reductase
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS08930 aminotransferase DegT 0.39 BPHYT_RS16800 4-hydroxy-tetrahydrodipicolinate reductase
Caulobacter crescentus NA1000 0.33 CCNA_01064 perosamine synthetase 0.32 CCNA_03664 dihydrodipicolinate reductase
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS22430 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.38 QEN71_RS26970 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas aeruginosa PA14 0.33 IKLFDK_18130 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.38 IKLFDK_29795 4-hydroxy-tetrahydrodipicolinate reductase
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01064 perosamine synthetase 0.32 CCNA_03664 dihydrodipicolinate reductase
Paraburkholderia graminis OAS925 0.33 ABIE53_002021 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.38 ABIE53_003529 4-hydroxy-tetrahydrodipicolinate reductase
Pantoea sp. MT58 0.33 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.38 IAI47_16125 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli Nissle 1917 0.33 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 ECOLIN_RS00160 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia fergusonii Becca 0.33 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.36 EFB2_04014 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.36 OHPLBJKB_03626 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli ECRC62 0.32 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 BNILDI_08315 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.39 Pf6N2E2_3366 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)
Escherichia coli BL21 0.32 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 0.36 ECD_00035 dihydrodipicolinate reductase
Marinobacter adhaerens HP15 0.32 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.40 HP15_3079 dihydrodipicolinate reductase
Ralstonia solanacearum PSI07 0.32 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.39 RPSI07_RS11455 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli ECOR27 0.32 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 NOLOHH_03285 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli BW25113 0.32 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 0.36 b0031 dapB dihydrodipicolinate reductase (NCBI)
Escherichia coli ECRC99 0.32 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 KEDOAH_17200 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli ECRC101 0.32 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 MCAODC_01470 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Rahnella sp. WP5 0.32 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.38 EX31_RS03840 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli ECRC98 0.32 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 JDDGAC_14550 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli ECRC102 0.32 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 NIAGMN_08805 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli ECRC100 0.32 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 OKFHMN_10955 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS15850 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.39 RALBFv3_RS05845 4-hydroxy-tetrahydrodipicolinate reductase
Ralstonia solanacearum UW163 0.32 UW163_RS13295 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.39 UW163_RS07780 4-hydroxy-tetrahydrodipicolinate reductase
Ralstonia solanacearum GMI1000 0.32 RS_RS06630 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.40 RS_RS13735 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas simiae WCS417 0.32 PS417_27245 aminotransferase DegT 0.38 PS417_24050 dihydrodipicolinate reductase
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4370 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.41 PfGW456L13_5101 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05587 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.39 GEMAOFIL_04960 4-hydroxy-tetrahydrodipicolinate reductase
Escherichia coli ECOR38 0.32 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.36 HEPCGN_08940 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS11420 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.40 ABZR87_RS01415 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas fluorescens SBW25 0.32 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.38 PFLU_RS25890 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.38 PFLU_RS25890 4-hydroxy-tetrahydrodipicolinate reductase
Dechlorosoma suillum PS 0.31 Dsui_0082 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.36 Dsui_3066 dihydrodipicolinate reductase
Synechocystis sp000284455 PCC 6803 0.30 SGL_RS09505 DegT/DnrJ/EryC1/StrS family aminotransferase 0.18 SGL_RS02200 4-hydroxy-tetrahydrodipicolinate reductase
Methanococcus maripaludis S2 0.30 MMP_RS01880 DegT/DnrJ/EryC1/StrS family aminotransferase 0.33 MMP_RS04790 4-hydroxy-tetrahydrodipicolinate reductase low > 25
Shewanella oneidensis MR-1 0.30 SO3270 polysaccharide biosynthesis protein (NCBI ptt file) 0.40 SO_1140 dapB dihydrodipicolinate reductase (RefSeq)
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0071 degT pleiotropic regulatory protein-like 0.18 Synpcc7942_2136 dapB dihydrodipicolinate reductase
Magnetospirillum magneticum AMB-1 0.30 AMB_RS00560 DegT/DnrJ/EryC1/StrS family aminotransferase 0.34 AMB_RS22745 4-hydroxy-tetrahydrodipicolinate reductase
Shewanella sp. ANA-3 0.29 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) 0.40 Shewana3_0966 dihydrodipicolinate reductase (RefSeq)
Rhodospirillum rubrum S1H 0.29 Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) 0.34 Rru_A0154 Dihydrodipicolinate reductase (NCBI)
Alteromonas macleodii MIT1002 0.28 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.33 MIT1002_01465 4-hydroxy-tetrahydrodipicolinate reductase
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_07955 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.18 CA264_04750 4-hydroxy-tetrahydrodipicolinate reductase
Acidovorax sp. GW101-3H11 0.26 Ac3H11_1545 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.38 Ac3H11_686 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)
Methylophilus sp. DMC18 0.25 GFF528 dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase 0.42 GFF310 4-hydroxy-tetrahydrodipicolinate reductase
Azospirillum brasilense Sp245 0.25 AZOBR_RS33605 erythromycin biosynthesis sensory transduction protein eryC1 0.31 AZOBR_RS01580 dihydrodipicolinate reductase
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_03400 aminotransferase DegT 0.39 AO356_07490 4-hydroxy-tetrahydrodipicolinate reductase
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_01285 perosamine synthetase 0.39 CSW01_12115 4-hydroxy-tetrahydrodipicolinate reductase
Shewanella loihica PV-4 0.24 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.38 Shew_2840 dihydrodipicolinate reductase (RefSeq)
Xanthobacter sp. DMC5 0.24 GFF4873 GDP-perosamine synthase 0.33 GFF2224 4-hydroxy-tetrahydrodipicolinate reductase
Phaeobacter inhibens DSM 17395 0.24 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase 0.34 PGA1_c32920 dihydrodipicolinate reductase DapB
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF1844 Aminotransferase 0.42 GFF2617 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase 0.30 ABZR86_RS05640 4-hydroxy-tetrahydrodipicolinate reductase
Castellaniella sp019104865 MT123 0.24 ABCV34_RS12945 DegT/DnrJ/EryC1/StrS family aminotransferase 0.36 ABCV34_RS07485 4-hydroxy-tetrahydrodipicolinate reductase
Variovorax sp. SCN45 0.24 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.40 GFF7298 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)
Pseudomonas sp. SVBP6 0.23 COO64_RS21480 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA 0.40 COO64_RS15250 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Pseudomonas sp. BP01 0.23 JOY50_RS13140 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.42 JOY50_RS26755 dapB 4-hydroxy-tetrahydrodipicolinate reductase
Bosea sp. OAE506 0.23 ABIE41_RS03045 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.29 ABIE41_RS00235 4-hydroxy-tetrahydrodipicolinate reductase
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.27 Ga0059261_2545 dihydrodipicolinate reductase (EC 1.3.1.26)
Rhodanobacter denitrificans MT42 0.22 LRK55_RS04940 DegT/DnrJ/EryC1/StrS family aminotransferase 0.30 LRK55_RS17840 4-hydroxy-tetrahydrodipicolinate reductase
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS05160 DegT/DnrJ/EryC1/StrS family aminotransferase 0.29 LRK54_RS17985 4-hydroxy-tetrahydrodipicolinate reductase
Acinetobacter radioresistens SK82 0.21 MPMX26_00061 GDP-perosamine synthase 0.36 MPMX26_03006 4-hydroxy-tetrahydrodipicolinate reductase
Rhodopseudomonas palustris CGA009 0.21 TX73_020615 DegT/DnrJ/EryC1/StrS family aminotransferase 0.34 TX73_001760 4-hydroxy-tetrahydrodipicolinate reductase
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_3862 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.19 Echvi_2395 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) (from data)
Rhodanobacter sp000427505 FW510-R12 0.20 LRK53_RS00475 DegT/DnrJ/EryC1/StrS family aminotransferase 0.27 LRK53_RS11375 4-hydroxy-tetrahydrodipicolinate reductase
Acinetobacter baumannii LAC-4 0.15 RR41_RS18630 LegC family aminotransferase 0.34 RR41_RS00190 4-hydroxy-tetrahydrodipicolinate reductase

Not shown: 11 genomes with orthologs for DVU3010 only; 15 genomes with orthologs for DVU1609 only