Conservation of cofitness between b3281 and b3770 in Escherichia coli BW25113

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.94 7
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00422 Shikimate dehydrogenase (NADP(+)) 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia coli BL21 1.00 ECD_03132 dehydroshikimate reductase, NAD(P)-binding 1.00 ECD_03648 branched-chain amino acid aminotransferase low > 60
Escherichia coli ECRC62 0.99 BNILDI_02165 aroE shikimate dehydrogenase 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECOR27 0.99 NOLOHH_09355 aroE shikimate dehydrogenase 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli ECRC101 0.98 OKFHMN_17565 aroE shikimate dehydrogenase 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 0.98 MCAODC_08085 aroE shikimate dehydrogenase 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC98 0.98 JDDGAC_21185 aroE shikimate dehydrogenase 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC102 0.98 NIAGMN_15325 aroE shikimate dehydrogenase 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC99 0.98 KEDOAH_10585 aroE shikimate dehydrogenase 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli Nissle 1917 0.97 ECOLIN_RS18840 shikimate dehydrogenase 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Escherichia coli ECOR38 0.97 HEPCGN_16385 aroE shikimate dehydrogenase 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia fergusonii Becca 0.96 EFB2_00542 Shikimate dehydrogenase (NADP(+)) 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Enterobacter sp. TBS_079 0.82 MPMX20_04189 Shikimate dehydrogenase (NADP(+)) 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0046 shikimate dehydrogenase 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I low > 76
Klebsiella michiganensis M5al 0.81 BWI76_RS25645 shikimate dehydrogenase 0.97 BWI76_RS00970 branched chain amino acid aminotransferase low > 92
Serratia liquefaciens MT49 0.66 IAI46_23240 shikimate dehydrogenase 0.92 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Pantoea sp. MT58 0.66 IAI47_02315 shikimate dehydrogenase 0.91 IAI47_01030 branched-chain amino acid transaminase — —
Erwinia tracheiphila SCR3 0.64 LU632_RS22445 aroE shikimate dehydrogenase 0.90 LU632_RS24405 branched-chain amino acid transaminase 0.52 44
Pectobacterium carotovorum WPP14 0.62 HER17_RS02250 shikimate dehydrogenase 0.90 HER17_RS01070 branched-chain amino acid transaminase low > 75
Rahnella sp. WP5 0.62 EX31_RS15950 shikimate dehydrogenase 0.90 EX31_RS15000 branched-chain amino acid transaminase — —
Dickeya dadantii 3937 0.61 DDA3937_RS19100 shikimate dehydrogenase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase — —
Dickeya dianthicola 67-19 0.61 HGI48_RS19190 shikimate dehydrogenase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase — —
Dickeya dianthicola ME23 0.60 DZA65_RS20315 shikimate dehydrogenase 0.91 DZA65_RS21340 branched-chain amino acid transaminase — —
Pseudomonas sp. RS175 0.50 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.21 PFR28_02449 putative branched-chain-amino-acid aminotransferase — —
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.22 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_10670 shikimate dehydrogenase 0.20 AO353_26655 branched-chain amino acid aminotransferase low > 101
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_00280 shikimate dehydrogenase 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.21 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_11315 shikimate dehydrogenase 0.21 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0025 shikimate dehydrogenase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0025 shikimate dehydrogenase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Shewanella sp. ANA-3 0.48 Shewana3_0043 aroE shikimate 5-dehydrogenase (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.27 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas simiae WCS417 0.48 PS417_00125 shikimate dehydrogenase 0.21 PS417_17565 branched-chain amino acid aminotransferase — —
Pseudomonas sp. S08-1 0.48 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.46 OH686_09695 branched-chain amino acid aminotransferase low > 80
Shewanella oneidensis MR-1 0.48 SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) low > 76
Dechlorosoma suillum PS 0.48 Dsui_0443 shikimate 5-dehydrogenase 0.47 Dsui_2030 branched-chain amino acid aminotransferase, group I — —
Pseudomonas stutzeri RCH2 0.47 Psest_0029 shikimate 5-dehydrogenase 0.46 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS00120 shikimate dehydrogenase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS00120 shikimate dehydrogenase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase — —
Shewanella loihica PV-4 0.47 Shew_3727 shikimate 5-dehydrogenase (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.76 59
Pseudomonas putida KT2440 0.45 PP_0074 shikimate 5-dehydrogenase 0.19 PP_3511 Branched-chain-amino-acid aminotransferase — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS01990 shikimate 5-dehydrogenase 0.44 HSERO_RS03330 branched-chain amino acid aminotransferase low > 78
Shewanella amazonensis SB2B 0.43 Sama_0052 shikimate dehydrogenase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS27130 shikimate dehydrogenase 0.44 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Marinobacter adhaerens HP15 0.41 HP15_3750 shikimate dehydrogenase 0.43 HP15_436 branched-chain-amino-acid aminotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.46 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 90
Paraburkholderia graminis OAS925 0.41 ABIE53_003560 shikimate dehydrogenase 0.43 ABIE53_003432 branched-chain amino acid aminotransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_01679 shikimate dehydrogenase (EC 1.1.1.25) 0.43 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme low > 103
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS16975 shikimate 5-dehydrogenase 0.43 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Acinetobacter radioresistens SK82 0.40 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.40 MPMX26_00445 Branched-chain-amino-acid aminotransferase low > 36
Castellaniella sp019104865 MT123 0.39 ABCV34_RS11620 shikimate dehydrogenase 0.45 ABCV34_RS07930 branched-chain amino acid transaminase low > 48
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS01605 shikimate dehydrogenase 0.25 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS05945 shikimate dehydrogenase 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase low > 76
Ralstonia solanacearum UW163 0.37 UW163_RS07680 shikimate dehydrogenase 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Ralstonia solanacearum GMI1000 0.37 RS_RS13890 shikimate dehydrogenase 0.45 RS_RS02840 branched-chain amino acid transaminase low > 80
Ralstonia solanacearum PSI07 0.37 RPSI07_RS11300 shikimate dehydrogenase 0.45 RPSI07_RS21175 branched-chain amino acid transaminase low > 81
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS17645 shikimate dehydrogenase 0.20 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 128
Rhodanobacter denitrificans MT42 0.33 LRK55_RS08360 shikimate dehydrogenase 0.56 LRK55_RS11755 branched-chain amino acid transaminase low > 63
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS08595 shikimate dehydrogenase 0.56 LRK54_RS12020 branched-chain amino acid transaminase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.19 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 74
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS14985 shikimate dehydrogenase 0.56 ABZR86_RS15965 branched-chain amino acid transaminase 0.97 19
Acidovorax sp. GW101-3H11 0.32 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.46 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 79
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_15365 aroE shikimate dehydrogenase 0.56 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 52
Variovorax sp. SCN45 0.32 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.44 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 127
Alteromonas macleodii MIT1002 0.31 MIT1002_00029 Shikimate dehydrogenase 0.17 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 — —
Lysobacter sp. OAE881 0.31 ABIE51_RS01815 shikimate dehydrogenase 0.55 ABIE51_RS16505 branched-chain amino acid transaminase low > 62
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0259 shikimate 5-dehydrogenase 0.20 B158DRAFT_0078 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase low > 40
Variovorax sp. OAS795 0.29 ABID97_RS06300 shikimate dehydrogenase 0.44 ABID97_RS03790 branched-chain amino acid transaminase — —
Dinoroseobacter shibae DFL-12 0.25 Dshi_3450 shikimate 5-dehydrogenase (RefSeq) 0.26 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) — —
Agrobacterium fabrum C58 0.24 Atu0003 shikimate 5-dehydrogenase 0.18 Atu0871 branched-chain-amino-acid aminotransferase — —
Phaeobacter inhibens DSM 17395 0.23 PGA1_c35150 shikimate dehydrogenase AroE 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE — —
Sinorhizobium meliloti 1021 0.23 SMc02791 shikimate 5-dehydrogenase 0.21 SMc02896 branched-chain amino acid aminotransferase — —
Rhodopseudomonas palustris CGA009 0.22 TX73_022410 shikimate dehydrogenase 0.18 TX73_022650 branched-chain amino acid aminotransferase — —
Rhodospirillum rubrum S1H 0.22 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.32 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) — —
Azospirillum sp. SherDot2 0.21 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.18 MPMX19_02406 Branched-chain-amino-acid aminotransferase — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00003 shikimate 5-dehydrogenase 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 67
Bosea sp. OAE506 0.19 ABIE41_RS04650 shikimate dehydrogenase 0.28 ABIE41_RS11405 branched-chain amino acid aminotransferase — —
Caulobacter crescentus NA1000 0.19 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.18 A4249_RS13660 shikimate dehydrogenase 0.27 A4249_RS09820 branched-chain amino acid aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.23 Ga0059261_3811 branched-chain amino acid aminotransferase, group II 0.92 13
Bacteroides ovatus ATCC 8483 0.17 BACOVA_05065 putative shikimate dehydrogenase 0.30 BACOVA_03679 branched-chain-amino-acid transaminase — —
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS06320 shikimate dehydrogenase 0.19 HMPREF1181_RS06865 branched-chain amino acid aminotransferase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.17 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.19 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file) — —
Phocaeicola vulgatus CL09T03C04 0.16 HMPREF1058_RS16750 shikimate dehydrogenase 0.18 HMPREF1058_RS02220 branched-chain amino acid aminotransferase low > 67
Phocaeicola dorei CL03T12C01 0.16 ABI39_RS12665 shikimate dehydrogenase 0.18 ABI39_RS01415 branched-chain amino acid aminotransferase 0.66 52
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS19745 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.29 CA265_RS15785 branched-chain-amino-acid transaminase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.15 Echvi_1145 Shikimate 5-dehydrogenase 0.18 Echvi_2202 branched-chain amino acid aminotransferase, group II — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.14 ABZR88_RS20055 shikimate dehydrogenase 0.16 ABZR88_RS22095 branched-chain amino acid aminotransferase — —

Not shown: 0 genomes with orthologs for b3281 only; 12 genomes with orthologs for b3770 only