Conservation of cofitness between b0908 and b3770 in Escherichia coli BW25113

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.92 11
Escherichia coli ECRC98 1.00 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 1.00 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC62 1.00 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECOR27 1.00 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 1.00 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC99 1.00 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC102 1.00 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia coli BL21 1.00 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase 1.00 ECD_03648 branched-chain amino acid aminotransferase 0.68 4
Escherichia coli ECOR38 0.98 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia coli Nissle 1917 0.98 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Escherichia fergusonii Becca 0.98 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Enterobacter sp. TBS_079 0.88 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.59 30
Klebsiella michiganensis M5al 0.87 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase 0.97 BWI76_RS00970 branched chain amino acid aminotransferase 0.47 87
Pantoea sp. MT58 0.83 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase 0.91 IAI47_01030 branched-chain amino acid transaminase — —
Rahnella sp. WP5 0.83 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase 0.90 EX31_RS15000 branched-chain amino acid transaminase — —
Dickeya dadantii 3937 0.80 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase — —
Serratia liquefaciens MT49 0.80 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase 0.92 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Dickeya dianthicola ME23 0.80 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase 0.91 DZA65_RS21340 branched-chain amino acid transaminase — —
Dickeya dianthicola 67-19 0.79 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase — —
Erwinia tracheiphila SCR3 0.79 LU632_RS09795 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.90 LU632_RS24405 branched-chain amino acid transaminase 0.75 25
Pectobacterium carotovorum WPP14 0.78 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase 0.90 HER17_RS01070 branched-chain amino acid transaminase 0.83 64
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Alteromonas macleodii MIT1002 0.67 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase 0.17 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 — —
Shewanella amazonensis SB2B 0.67 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.67 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.75 58
Shewanella sp. ANA-3 0.66 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) low > 73
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase 0.43 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase 0.43 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme — —
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase 0.44 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Paraburkholderia graminis OAS925 0.54 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase 0.43 ABIE53_003432 branched-chain amino acid aminotransferase — —
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS18420 3-phosphoshikimate 1-carboxyvinyltransferase 0.44 HSERO_RS03330 branched-chain amino acid aminotransferase — —
Ralstonia solanacearum GMI1000 0.51 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase 0.45 RS_RS02840 branched-chain amino acid transaminase low > 80
Ralstonia solanacearum PSI07 0.51 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase 0.45 RPSI07_RS21175 branched-chain amino acid transaminase — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase 0.42 38
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase 0.20 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 128
Ralstonia solanacearum UW163 0.51 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase 0.25 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_1748 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.46 DvMF_2268 branched-chain amino acid aminotransferase (RefSeq) — —
Methanococcus maripaludis S2 0.27 MMP_RS06205 3-phosphoshikimate 1-carboxyvinyltransferase 0.31 MMP_RS00760 branched-chain-amino-acid transaminase — —
Bacteroides thetaiotaomicron VPI-5482 0.27 BT2186 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (from data) 0.19 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file) — —
Methanococcus maripaludis JJ 0.27 MMJJ_RS08145 3-phosphoshikimate 1-carboxyvinyltransferase 0.31 MMJJ_RS04725 branched-chain-amino-acid transaminase — —
Bacteroides stercoris CC31F 0.26 HMPREF1181_RS09330 3-phosphoshikimate 1-carboxyvinyltransferase 0.19 HMPREF1181_RS06865 branched-chain amino acid aminotransferase low > 56
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.20 B158DRAFT_0078 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase low > 40
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase 0.18 Echvi_2202 branched-chain amino acid aminotransferase, group II — —
Bacteroides ovatus ATCC 8483 0.25 BACOVA_03157 3-phosphoshikimate 1-carboxyvinyltransferase 0.30 BACOVA_03679 branched-chain-amino-acid transaminase — —
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS05635 3-phosphoshikimate 1-carboxyvinyltransferase 0.19 HMPREF1078_RS07855 branched-chain amino acid aminotransferase — —
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS09575 3-phosphoshikimate 1-carboxyvinyltransferase 0.18 ABI39_RS01415 branched-chain amino acid aminotransferase 0.64 32
Rhizobium sp. OAE497 0.24 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase 0.19 ABIE40_RS22240 branched-chain amino acid aminotransferase — —
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme — —
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS13970 3-phosphoshikimate 1-carboxyvinyltransferase 0.18 HMPREF1058_RS02220 branched-chain amino acid aminotransferase low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS07000 3-phosphoshikimate 1-carboxyvinyltransferase 0.16 ABZR88_RS22095 branched-chain amino acid aminotransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.23 DVU0463 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (TIGR) 0.46 DVU3197 ilvE branched-chain amino acid aminotransferase (TIGR) — —
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS11640 3-phosphoshikimate 1-carboxyvinyltransferase 0.29 CA265_RS15785 branched-chain-amino-acid transaminase — —
Agrobacterium fabrum C58 0.23 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase 0.18 Atu0871 branched-chain-amino-acid aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_13100 3-phosphoshikimate 1-carboxyvinyltransferase 0.32 CA264_06940 branched-chain amino acid aminotransferase low > 74
Pseudomonas simiae WCS417 0.21 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase 0.21 PS417_17565 branched-chain amino acid aminotransferase low > 88
Lysobacter sp. OAE881 0.18 ABIE51_RS12135 3-phosphoshikimate 1-carboxyvinyltransferase 0.55 ABIE51_RS16505 branched-chain amino acid transaminase — —
Bifidobacterium breve UCC2003 0.17 BBR_RS14370 3-phosphoshikimate 1-carboxyvinyltransferase 0.17 BBR_RS15210 branched-chain amino acid aminotransferase low > 34
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS02230 3-phosphoshikimate 1-carboxyvinyltransferase 0.56 ABZR86_RS15965 branched-chain amino acid transaminase 0.90 37
Mycobacterium tuberculosis H37Rv 0.17 Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) 0.19 Rv2210c Branched-chain amino acid transaminase IlvE — —
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_06920 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.56 OKGIIK_11840 ilvE branched-chain amino acid transaminase — —
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.3281.1 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) 0.19 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.67 61
Synechococcus elongatus PCC 7942 0.16 Synpcc7942_0232 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.29 Synpcc7942_1029 ilvE branched-chain amino acid aminotransferase — —
Rhodanobacter denitrificans MT42 0.16 LRK55_RS00130 3-phosphoshikimate 1-carboxyvinyltransferase 0.56 LRK55_RS11755 branched-chain amino acid transaminase low > 63
Rhodopseudomonas palustris CGA009 0.16 TX73_000320 3-phosphoshikimate 1-carboxyvinyltransferase 0.18 TX73_022650 branched-chain amino acid aminotransferase — —
Dinoroseobacter shibae DFL-12 0.15 Dshi_1022 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.26 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) — —
Sinorhizobium meliloti 1021 0.15 SMc00333 3-phosphoshikimate 1-carboxyvinyltransferase 0.21 SMc02896 branched-chain amino acid aminotransferase — —
Bosea sp. OAE506 0.15 ABIE41_RS03910 3-phosphoshikimate 1-carboxyvinyltransferase 0.28 ABIE41_RS11405 branched-chain amino acid aminotransferase — —
Magnetospirillum magneticum AMB-1 0.15 AMB_RS21555 3-phosphoshikimate 1-carboxyvinyltransferase 0.31 AMB_RS02850 branched-chain amino acid aminotransferase — —
Rhodanobacter denitrificans FW104-10B01 0.15 LRK54_RS00390 3-phosphoshikimate 1-carboxyvinyltransferase 0.56 LRK54_RS12020 branched-chain amino acid transaminase — —
Phaeobacter inhibens DSM 17395 0.15 PGA1_c04810 3-phosphoshikimate 1-carboxyvinyltransferase AroA 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE — —
Brevundimonas sp. GW460-12-10-14-LB2 0.14 A4249_RS10920 3-phosphoshikimate 1-carboxyvinyltransferase 0.27 A4249_RS09820 branched-chain amino acid aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.14 Ga0059261_0167 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.23 Ga0059261_3811 branched-chain amino acid aminotransferase, group II — —
Caulobacter crescentus NA1000 Δfur 0.14 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 67
Caulobacter crescentus NA1000 0.14 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase 0.31 CCNA_03024 branched-chain amino acid aminotransferase — —
Rhodospirillum rubrum S1H 0.13 Rru_A0295 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) 0.32 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) — —
Azospirillum brasilense Sp245 0.12 AZOBR_RS03090 3-phosphoshikimate 1-carboxyvinyltransferase 0.31 AZOBR_RS16425 branched-chain amino acid aminotransferase — —
Azospirillum sp. SherDot2 0.12 MPMX19_02233 3-phosphoshikimate 1-carboxyvinyltransferase 0.18 MPMX19_02406 Branched-chain-amino-acid aminotransferase — —

Not shown: 1 genomes with orthologs for b0908 only; 17 genomes with orthologs for b3770 only