Homologs of RALBFv3_RS17700 from Ralstonia solanacearum IBSBF1503

ATP-dependent helicase
SEED: ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog
KEGG: DNA helicase II / ATP-dependent DNA helicase PcrA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17700 ATP-dependent helicase insig. 100 100
o Ralstonia solanacearum UW163 UW163_RS21450 ATP-dependent helicase insig. 100 100
o Ralstonia solanacearum PSI07 RPSI07_RS05880 ATP-dependent helicase insig. 96 100
o Ralstonia solanacearum GMI1000 RS_RS23300 ATP-dependent helicase insig. 94 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS18640 ATP-dependent helicase insig. 91 100
o Sinorhizobium meliloti 1021 SMa2321 UvrD2 DNA helicase insig. 61 98
o Rhizobium sp. OAE497 ABIE40_RS02665 ATP-dependent helicase insig. 61 98
o Agrobacterium fabrum C58 Atu4619 ATP-dependent DNA helicase insig. 60 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04321 DNA helicase-2 / ATP-dependent DNA helicase PcrA insig. 62 100
o Burkholderia phytofirmans PsJN BPHYT_RS14580 ATP-dependent DNA helicase insig. 63 98
o Variovorax sp. OAS795 ABID97_RS04485 ATP-dependent helicase insig. 65 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS04400 ATP-dependent helicase insig. 61 98
o Variovorax sp. SCN45 GFF7292 ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog insig. 63 100
o Rhodopseudomonas palustris CGA009 TX73_014510 ATP-dependent helicase insig. 62 98
o Bosea sp. OAE506 ABIE41_RS01165 ATP-dependent helicase insig. 61 98
o Paraburkholderia graminis OAS925 ABIE53_003077 DNA helicase-2/ATP-dependent DNA helicase PcrA insig. 61 96
o Cupriavidus basilensis FW507-4G11 RR42_RS01715 ATP-dependent DNA helicase insig. 64 99
o Herbaspirillum seropedicae SmR1 HSERO_RS13955 ATP-dependent DNA helicase insig. 60 95
o Desulfovibrio vulgaris Hildenborough JW710 DVU0156 pcrA ATP-dependent DNA helicase, UvrD/REP family (TIGR) insig. 37 89
  Desulfovibrio vulgaris Miyazaki F DvMF_1967 UvrD/REP helicase (RefSeq) strong 36 89
  Phocaeicola dorei CL03T12C01 ABI39_RS17735 UvrD-helicase domain-containing protein no data 33 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03305 UvrD-helicase domain-containing protein strong 32 88
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03560 3'-5' exonuclease insig. 32 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07840 ATP-dependent helicase no data 30 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 31 88
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12980 ATP-dependent DNA helicase no data 31 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07795 ATP-dependent DNA helicase no data 31 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA strong 33 91
  Pseudomonas fluorescens FW300-N2C3 AO356_11990 DNA helicase II strong 33 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA insig. 33 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA sig. 33 91
  Synechococcus elongatus PCC 7942 Synpcc7942_2168 pcrA ATP-dependent DNA helicase, Rep family insig. 33 88
  Pseudomonas fluorescens FW300-N2E3 AO353_10055 DNA helicase II strong 33 91
o Acinetobacter radioresistens SK82 MPMX26_00369 ATP-dependent DNA helicase PcrA insig. 34 88
  Pseudomonas fluorescens SBW25 PFLU_RS29900 DNA helicase II cofit 33 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29900 DNA helicase II strong 33 91
  Bacteroides thetaiotaomicron VPI-5482 BT0657 ATP-dependent DNA helicase (NCBI ptt file) no data 30 89
  Pseudomonas sp. RS175 PFR28_04523 DNA helicase II sig. 33 91
  Dickeya dianthicola ME23 DZA65_RS21080 DNA helicase II sig. 33 88
  Pseudomonas sp. S08-1 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA insig. 33 94
  Dickeya dadantii 3937 DDA3937_RS19880 DNA helicase II strong 33 93
  Dickeya dianthicola 67-19 HGI48_RS20035 DNA helicase II sig. 33 88
  Pectobacterium carotovorum WPP14 HER17_RS01360 DNA helicase II cofit 33 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0249 Superfamily I DNA and RNA helicases strong 32 94
  Paraburkholderia graminis OAS925 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA no data 31 95
  Fusobacterium nucleatum SB010 HUW76_07175 UvrD-helicase domain-containing protein strong 28 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS05110 3'-5' exonuclease no data 31 95
  Burkholderia phytofirmans PsJN BPHYT_RS13840 DNA-dependent helicase no data 31 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04469 ATP-dependent DNA helicase UvrD no data 31 95
  Bacteroides ovatus ATCC 8483 BACOVA_02365 UvrD/REP helicase no data 30 88
  Agrobacterium fabrum C58 Atu2057 DNA helicase II sig. 33 87
  Shewanella sp. ANA-3 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) strong 32 92
  Erwinia tracheiphila SCR3 LU632_RS24125 uvrD DNA helicase II no data 32 94
  Pseudomonas syringae pv. syringae B728a Psyr_5065 ATP-dependent DNA helicase UvrD strong 31 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5065 ATP-dependent DNA helicase UvrD strong 31 91
  Bacteroides stercoris CC31F HMPREF1181_RS16505 UvrD-helicase domain-containing protein insig. 30 88
  Shewanella oneidensis MR-1 SO0467 uvrD DNA helicase II (NCBI ptt file) strong 32 92
  Pseudomonas putida KT2440 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex strong 32 91
  Klebsiella michiganensis M5al BWI76_RS01220 DNA-dependent helicase II strong 32 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04237 DNA helicase II sig. 32 92
  Escherichia coli BL21 ECD_03689 DNA-dependent ATPase I and helicase II no data 32 92
  Escherichia fergusonii Becca EFB2_04824 DNA helicase II strong 32 92
  Escherichia coli ECOR27 NOLOHH_06540 uvrD DNA helicase II cofit 32 92
  Escherichia coli ECOR38 HEPCGN_13115 uvrD DNA helicase II cofit 32 92
  Escherichia coli ECRC100 OKFHMN_14410 uvrD DNA helicase II sig. 32 92
  Escherichia coli ECRC101 MCAODC_04915 uvrD DNA helicase II cofit 32 92
  Escherichia coli ECRC102 NIAGMN_12165 uvrD DNA helicase II strong 32 92
  Escherichia coli ECRC62 BNILDI_04995 uvrD DNA helicase II cofit 32 92
  Escherichia coli ECRC98 JDDGAC_18035 uvrD DNA helicase II cofit 32 92
  Escherichia coli ECRC99 KEDOAH_13740 uvrD DNA helicase II no data 32 92
  Escherichia coli Nissle 1917 ECOLIN_RS21885 DNA helicase II cofit 32 92
  Escherichia coli BW25113 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) strong 32 92
  Rhizobium sp. OAE497 ABIE40_RS11670 UvrD-helicase domain-containing protein sig. 33 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_01015 DNA helicase II strong 33 88
  Mycobacterium tuberculosis H37Rv Rv0949 Probable ATP-dependent DNA helicase II UvrD1 insig. 33 91
  Bosea sp. OAE506 ABIE41_RS12730 UvrD-helicase domain-containing protein insig. 32 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF241 ATP-dependent DNA helicase UvrD/PcrA strong 32 92
  Shewanella amazonensis SB2B Sama_0419 uvrD DNA-dependent helicase II (RefSeq) strong 31 92
  Serratia liquefaciens MT49 IAI46_00735 DNA helicase II strong 31 92
  Magnetospirillum magneticum AMB-1 AMB_RS03725 DNA helicase II strong 32 90
  Acidovorax sp. GW101-3H11 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA insig. 30 91
  Phaeobacter inhibens DSM 17395 PGA1_c09450 DNA helicase II UvrD strong 32 90
  Pseudomonas stutzeri RCH2 Psest_4098 Superfamily I DNA and RNA helicases strong 32 91
  Variovorax sp. OAS795 ABID97_RS09150 UvrD-helicase domain-containing protein sig. 29 93
  Enterobacter sp. TBS_079 MPMX20_04463 DNA helicase II strong 31 92
  Enterobacter asburiae PDN3 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) insig. 31 92
  Alteromonas macleodii MIT1002 MIT1002_00153 DNA helicase II sig. 31 91
  Pantoea sp. MT58 IAI47_18390 DNA helicase II insig. 32 94
  Dechlorosoma suillum PS Dsui_1227 DNA/RNA helicase, superfamily I strong 31 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04960 UvrD-helicase domain-containing protein insig. 32 89
  Caulobacter crescentus NA1000 CCNA_01596 DNA helicase II strong 31 88
  Caulobacter crescentus NA1000 Δfur CCNA_01596 DNA helicase II cofit 31 88
  Sinorhizobium meliloti 1021 SMc01461 DNA helicase II protein strong 31 88
  Azospirillum sp. SherDot2 MPMX19_01610 ATP-dependent DNA helicase PcrA insig. 32 92
  Marinobacter adhaerens HP15 HP15_3403 UvrD/REP helicase strong 32 87
  Dinoroseobacter shibae DFL-12 Dshi_2483 UvrD/REP helicase (RefSeq) no data 32 88
  Variovorax sp. SCN45 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) cofit 29 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16965 DNA helicase II strong 32 88
  Azospirillum brasilense Sp245 AZOBR_RS12445 DNA helicase II insig. 32 90
  Bifidobacterium breve UCC2003 BBR_RS14985 ATP-dependent DNA helicase PcrA strong 31 90