Homologs of Psyr_3705 from Pseudomonas syringae pv. syringae B728a

conserved hypothetical protein
SEED: tRNA(Cytosine32)-2-thiocytidine synthetase
KEGG: tRNA 2-thiocytidine biosynthesis protein TtcA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_3705 conserved hypothetical protein insig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3705 conserved hypothetical protein insig. 100 100
o Pseudomonas sp. DMC3 GFF4833 tRNA-cytidine(32) 2-sulfurtransferase cofit 96 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 96 100
o Pseudomonas fluorescens FW300-N2E3 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 95 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 96 100
o Pseudomonas simiae WCS417 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 95 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03610 tRNA-cytidine(32) 2-sulfurtransferase insig. 94 100
o Pseudomonas orientalis W4I3 QF045_RS18170 tRNA 2-thiocytidine(32) synthetase TtcA insig. 94 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase strong 94 100
o Pseudomonas fluorescens SBW25 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA insig. 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA sig. 94 100
o Pseudomonas sp. RS175 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase insig. 93 100
o Pseudomonas fluorescens FW300-N2C3 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 93 100
o Pseudomonas sp. SVBP6 COO64_RS07395 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 92 100
o Pseudomonas sp. BP01 JOY50_RS23840 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 91 100
o Pseudomonas putida KT2440 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 90 100
o Pseudomonas aeruginosa MRSN321 DY961_RS06455 ttcA;go_process=tRNA tRNA 2-thiocytidine(32) synthetase TtcA insig. 87 100
o Pseudomonas aeruginosa PA14 IKLFDK_05600 tRNA 2-thiocytidine(32) synthetase TtcA insig. 87 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS46340 ttcA;go_process=tRNA tRNA 2-thiocytidine(32) synthetase TtcA insig. 87 100
o Pseudomonas segetis P6 ACVTMO_RS08965 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 86 100
o Pseudomonas stutzeri RCH2 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control insig. 86 100
o Pseudomonas sp. S08-1 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA cofit 84 100
o Shewanella amazonensis SB2B Sama_1801 hypothetical protein (RefSeq) sig. 73 95
  Shewanella sp. ANA-3 Shewana3_2117 PP-loop domain-containing protein (RefSeq) sig. 73 93
o Kangiella aquimarina DSM 16071 B158DRAFT_2154 tRNA s(2)C-32 sulfurtransferase (EC 2.8.1.4) insig. 71 95
o Shewanella oneidensis MR-1 SO2354 conserved hypothetical protein (NCBI ptt file) insig. 72 93
o Escherichia coli ECRC62 BNILDI_18020 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 96
o Alteromonas macleodii MIT1002 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 72 93
o Escherichia coli ECOR38 HEPCGN_26005 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 96
o Escherichia coli ECRC101 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 96
o Escherichia coli ECRC99 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA no data 70 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02337 tRNA-cytidine(32) 2-sulfurtransferase insig. 70 96
o Escherichia coli BL21 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein insig. 70 96
o Escherichia coli ECOR27 NOLOHH_19870 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 96
o Escherichia coli ECRC100 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA no data 70 96
o Escherichia coli ECRC102 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 96
o Escherichia coli ECRC98 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 96
o Escherichia coli BW25113 b1344 ydaO predicted C32 tRNA thiolase (NCBI) sig. 70 96
o Escherichia coli Nissle 1917 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA no data 70 96
o Marinobacter adhaerens HP15 HP15_2116 PP-loop domain protein insig. 72 90
o Pantoea sp. MT58 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA insig. 71 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_07180 tRNA 2-thiocytidine(32) synthetase TtcA insig. 71 92
o Klebsiella pneumoniae MKP103 KDGMDA_20605 tRNA 2-thiocytidine(32) synthetase TtcA insig. 71 92
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_24015 ttcA tRNA 2-thiocytidine(32) synthetase TtcA cofit 71 93
o Escherichia fergusonii Becca EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase insig. 69 96
o Erwinia tracheiphila SCR3 LU632_RS12165 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 71 93
o Dickeya dadantii 3937 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase strong 71 92
o Dickeya dianthicola 67-19 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 92
o Dickeya dianthicola ME23 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 92
o Klebsiella michiganensis M5al BWI76_RS12710 tRNA 2-thiocytidine(32) synthetase TtcA insig. 71 92
o Shewanella loihica PV-4 Shew_1995 PP-loop domain-containing protein (RefSeq) insig. 70 96
o Enterobacter asburiae PDN3 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control insig. 71 92
o Enterobacter sp. TBS_079 MPMX20_02440 tRNA-cytidine(32) 2-sulfurtransferase insig. 71 92
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06680 tRNA 2-thiocytidine(32) synthetase TtcA cofit 70 92
o Pectobacterium carotovorum WPP14 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS16485 tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 93
o Serratia liquefaciens MT49 IAI46_13420 tRNA 2-thiocytidine(32) synthetase TtcA insig. 71 92
o Erwinia amylovora T8 OLJFJH_13765 tRNA 2-thiocytidine(32) synthetase TtcA insig. 68 92
o Rahnella sp. WP5 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA insig. 68 92
o Ralstonia solanacearum PSI07 RPSI07_RS23130 tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 93
o Lysobacter sp. OAE881 ABIE51_RS01305 tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 91
o Ralstonia solanacearum GMI1000 RS_RS00865 tRNA 2-thiocytidine(32) synthetase TtcA insig. 70 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10245 tRNA 2-thiocytidine(32) synthetase TtcA insig. 67 96
o Ralstonia solanacearum UW163 UW163_RS03335 tRNA 2-thiocytidine(32) synthetase TtcA insig. 67 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS05700 tRNA 2-thiocytidine(32) synthetase TtcA insig. 68 93
  Paraburkholderia graminis OAS925 ABIE53_000036 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 68 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05824 tRNA s(2)C-32 sulfurtransferase insig. 68 93
o Cupriavidus basilensis FW507-4G11 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 65 96
  Burkholderia phytofirmans PsJN BPHYT_RS18570 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 68 92
o Acinetobacter baumannii LAC-4 RR41_RS04315 tRNA 2-thiocytidine(32) synthetase TtcA sig. 69 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS28595 tRNA 2-thiocytidine(32) synthetase TtcA cofit 68 92
o Acidovorax sp. GW101-3H11 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase cofit 67 94
o Acinetobacter radioresistens SK82 MPMX26_00810 tRNA-cytidine(32) 2-sulfurtransferase insig. 68 90
o Variovorax sp. OAS795 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA insig. 67 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10680 tRNA 2-thiocytidine(32) synthetase TtcA insig. 67 92
o Rhodanobacter denitrificans MT42 LRK55_RS10320 tRNA 2-thiocytidine(32) synthetase TtcA insig. 67 92
o Variovorax sp. SCN45 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA insig. 66 93
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03470 tRNA 2-thiocytidine(32) synthetase TtcA insig. 67 92
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1658 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 63 95
o Herbaspirillum seropedicae SmR1 HSERO_RS22035 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 65 91
o Methylophilus sp. DMC18 GFF1541 tRNA-cytidine(32) 2-sulfurtransferase insig. 65 92
o Dechlorosoma suillum PS Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control insig. 65 94
o Rhodanobacter sp. FW510-T8 OKGIIK_13200 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 66 92
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 65 91
o Castellaniella sp019104865 MT123 ABCV34_RS10450 tRNA 2-thiocytidine(32) synthetase TtcA insig. 66 90
  Acidovorax sp. GW101-3H11 Ac3H11_3296 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 61 90
o Rhizobium sp. OAE497 ABIE40_RS10230 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 95
o Sinorhizobium meliloti 1021 SMc00534 C32 tRNA thiolase insig. 51 93
o Phaeobacter inhibens DSM 17395 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 50 93
o Agrobacterium fabrum C58 Atu1858 hypothetical protein sig. 52 96
o Dinoroseobacter shibae DFL-12 Dshi_0330 PP-loop domain protein (RefSeq) insig. 51 91
o Fusobacterium nucleatum SB010 HUW76_05920 tRNA 2-thiocytidine(32) synthetase TtcA strong 36 85
o Bacteroides ovatus ATCC 8483 BACOVA_05345 PP-loop family protein sig. 32 89
o Bacteroides stercoris CC31F HMPREF1181_RS13335 adenine nucleotide alpha hydrolase family protein insig. 29 91
o Phocaeicola dorei CL03T12C01 ABI39_RS18325 adenine nucleotide alpha hydrolase family protein sig. 32 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05785 adenine nucleotide alpha hydrolase family protein insig. 32 90
o Bacteroides thetaiotaomicron VPI-5482 BT4558 conserved hypothetical protein (NCBI ptt file) insig. 31 89
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS13920 tRNA 2-thiocytidine biosynthesis TtcA family protein insig. 29 83