Homologs of PP_2232 from Pseudomonas putida KT2440

XRE family transcriptional regulator
SEED: Transcriptional regulator, Cro/CI family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2232 XRE family transcriptional regulator sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS12560 helix-turn-helix domain-containing protein insig. 92 100
o Pseudomonas sp. SVBP6 COO64_RS19420 helix-turn-helix domain-containing protein insig. 69 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_541 Transcriptional regulator, Cro/CI family insig. 70 100
o Pseudomonas sp. RS175 PFR28_02400 hypothetical protein sig. 69 100
o Pseudomonas fluorescens FW300-N2E3 AO353_21480 Cro/Cl family transcriptional regulator strong 69 100
o Pseudomonas fluorescens FW300-N2C3 AO356_23290 Cro/Cl family transcriptional regulator sig. 70 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5820 Transcriptional regulator, Cro/CI family strong 67 100
o Pseudomonas simiae WCS417 PS417_16820 Cro/Cl family transcriptional regulator no data 66 100
o Pseudomonas orientalis W4I3 QF045_RS18555 XRE family transcriptional regulator cofit 64 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03682 HTH-type transcriptional regulator SutR cofit 64 100
o Pseudomonas fluorescens SBW25 PFLU_RS18830 helix-turn-helix domain-containing protein insig. 64 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18830 helix-turn-helix domain-containing protein strong 64 100
o Pseudomonas syringae pv. syringae B728a Psyr_3250 Helix-turn-helix motif protein insig. 65 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3250 Helix-turn-helix motif protein insig. 65 100
o Pseudomonas aeruginosa MRSN321 DY961_RS19145 XRE family transcriptional regulator strong 59 99
o Pseudomonas aeruginosa PA14 IKLFDK_06470 Cro/Cl family transcriptional regulator strong 59 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS53270 XRE family transcriptional regulator strong 59 99
o Serratia liquefaciens MT49 IAI46_09015 helix-turn-helix transcriptional regulator no data 56 100
o Sphingobium sp. HT1-2 GFF1865 Transcriptional regulator, Xre family cofit 54 99
o Pseudomonas sp. DMC3 GFF1740 hypothetical protein cofit 66 82
o Acinetobacter baumannii LAC-4 RR41_RS01325 XRE family transcriptional regulator insig. 47 99
o Rhizobium sp. OAE497 ABIE40_RS21490 XRE family transcriptional regulator sig. 48 98
o Klebsiella michiganensis M5al BWI76_RS13955 hypothetical protein insig. 33 98
o Enterobacter sp. TBS_079 MPMX20_03983 hypothetical protein insig. 34 97
  Pseudomonas sp. DMC3 GFF1048 HTH-type transcriptional regulator SutR no data 34 97
o Enterobacter asburiae PDN3 EX28DRAFT_3141 transcriptional regulator, XRE family with cupin sensor insig. 32 97
  Ralstonia solanacearum GMI1000 RS_RS23520 XRE family transcriptional regulator no data 31 97
o Ralstonia solanacearum GMI1000 RS_RS23650 XRE family transcriptional regulator no data 31 97
o Rahnella sp. WP5 EX31_RS05710 helix-turn-helix transcriptional regulator insig. 30 97
o Pantoea sp. MT58 IAI47_10265 helix-turn-helix domain-containing protein insig. 36 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07555 helix-turn-helix domain-containing protein cofit 34 98
o Klebsiella pneumoniae MKP103 KDGMDA_23150 XRE family transcriptional regulator insig. 35 95
  Klebsiella michiganensis M5al BWI76_RS13370 hypothetical protein insig. 34 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2660 Putative transcriptional regulator insig. 32 97
  Pantoea sp. MT58 IAI47_18980 helix-turn-helix domain-containing protein sig. 31 98
  Pseudomonas fluorescens FW300-N2C3 AO356_27170 XRE family transcriptional regulator strong 32 98
o Escherichia coli ECRC100 OKFHMN_01605 sutR DNA-binding transcriptional regulator SutR insig. 33 94
o Escherichia coli ECRC101 MCAODC_16335 sutR DNA-binding transcriptional regulator SutR insig. 33 94
o Escherichia coli ECRC102 NIAGMN_25740 sutR DNA-binding transcriptional regulator SutR no data 33 94
o Escherichia coli ECRC98 JDDGAC_04095 sutR DNA-binding transcriptional regulator SutR insig. 33 94
o Escherichia coli ECRC99 KEDOAH_26835 sutR DNA-binding transcriptional regulator SutR no data 33 94
o Escherichia coli Nissle 1917 ECOLIN_RS08275 DNA-binding transcriptional regulator SutR no data 32 94
o Escherichia fergusonii Becca EFB2_02548 HTH-type transcriptional regulator SutR insig. 32 94
o Escherichia coli ECOR38 HEPCGN_26215 sutR DNA-binding transcriptional regulator SutR insig. 32 94
  Azospirillum sp. SherDot2 MPMX19_02581 HTH-type transcriptional regulator SutR insig. 33 83
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02314 hypothetical protein cofit 30 98
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05870 helix-turn-helix domain-containing protein cofit 35 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS06145 XRE family transcriptional regulator insig. 31 96
  Klebsiella pneumoniae MKP103 KDGMDA_05560 XRE family transcriptional regulator insig. 30 97
o Escherichia coli BL21 ECD_01392 putative DNA-binding transcriptional regulator no data 32 94
o Escherichia coli ECOR27 NOLOHH_19280 sutR DNA-binding transcriptional regulator SutR insig. 32 94
o Escherichia coli ECRC62 BNILDI_17730 sutR DNA-binding transcriptional regulator SutR insig. 32 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02281 HTH-type transcriptional regulator SutR insig. 32 94
o Escherichia coli BW25113 b1434 ydcN predicted DNA-binding transcriptional regulator (NCBI) insig. 32 94
  Rhodospirillum rubrum S1H Rru_A2614 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 35 93
o Methanococcus maripaludis JJ MMJJ_RS04940 XRE family transcriptional regulator insig. 33 84
o Methanococcus maripaludis S2 MMP_RS01155 XRE family transcriptional regulator strong 30 91
  Methanococcus maripaludis S2 MMP_RS00545 XRE family transcriptional regulator insig. 33 84
  Acinetobacter baumannii LAC-4 RR41_RS01095 XRE family transcriptional regulator insig. 30 92
  Cupriavidus basilensis FW507-4G11 RR42_RS21695 DNA-binding protein sig. 30 95
o Azospirillum brasilense Sp245 AZOBR_RS20500 transcriptional regulator insig. 35 91
  Serratia liquefaciens MT49 IAI46_11440 helix-turn-helix transcriptional regulator cofit 32 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2595 Transcriptional regulator yidN, Cro/CI family insig. 30 97
  Dickeya dianthicola 67-19 HGI48_RS18970 helix-turn-helix transcriptional regulator cofit 31 86
  Dickeya dianthicola ME23 DZA65_RS20080 helix-turn-helix transcriptional regulator insig. 31 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01814 transcriptional regulator, XRE family with cupin sensor insig. 27 96
o Variovorax sp. SCN45 GFF5178 Transcriptional regulator, Xre-family with cupin domain insig. 30 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS16640 XRE family transcriptional regulator insig. 30 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10395 helix-turn-helix domain-containing protein insig. 30 92
  Ralstonia solanacearum UW163 UW163_RS03185 helix-turn-helix domain-containing protein no data 30 92
  Azospirillum sp. SherDot2 MPMX19_02874 HTH-type transcriptional regulator SutR insig. 31 89
  Rahnella sp. WP5 EX31_RS03010 helix-turn-helix domain-containing protein sig. 29 92
  Acidovorax sp. GW101-3H11 Ac3H11_1308 Transcriptional regulator no data 28 96
  Rhodopseudomonas palustris CGA009 TX73_013495 XRE family transcriptional regulator insig. 32 91
  Enterobacter asburiae PDN3 EX28DRAFT_1223 Cupin domain/Helix-turn-helix insig. 29 95
o Phaeobacter inhibens DSM 17395 PGA1_c29470 puttative helix-turn-helix protein insig. 28 90
  Ralstonia solanacearum PSI07 RPSI07_RS22920 helix-turn-helix domain-containing protein insig. 29 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS33370 XRE family transcriptional regulator insig. 31 94
  Bosea sp. OAE506 ABIE41_RS03270 XRE family transcriptional regulator insig. 29 95
  Klebsiella pneumoniae MKP103 KDGMDA_23030 LacI family transcriptional regulator insig. 29 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2260 Transcriptional regulator insig. 28 92
o Dickeya dadantii 3937 DDA3937_RS07775 helix-turn-helix transcriptional regulator insig. 27 92
  Erwinia amylovora T8 OLJFJH_15285 XRE family transcriptional regulator insig. 29 93
o Alteromonas macleodii MIT1002 MIT1002_00748 DNA-binding transcriptional repressor PuuR insig. 28 90
o Vibrio cholerae E7946 ATCC 55056 CSW01_09830 XRE family transcriptional regulator insig. 29 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08380 DNA-binding protein cofit 29 91
  Erwinia tracheiphila SCR3 LU632_RS22230 helix-turn-helix domain-containing protein cofit 29 91
  Ralstonia solanacearum GMI1000 RS_RS15735 XRE family transcriptional regulator insig. 29 82
  Klebsiella michiganensis M5al BWI76_RS00575 DNA-binding protein strong 27 92
  Rhizobium sp. OAE497 ABIE40_RS01060 XRE family transcriptional regulator insig. 26 94
  Variovorax sp. OAS795 ABID97_RS06760 XRE family transcriptional regulator insig. 30 81
  Enterobacter asburiae PDN3 EX28DRAFT_4383 transcriptional regulator, XRE family with cupin sensor strong 30 92
  Enterobacter sp. TBS_079 MPMX20_02243 HTH-type transcriptional regulator SutR insig. 29 97
  Klebsiella michiganensis M5al BWI76_RS13480 XRE family transcriptional regulator sig. 28 89
  Cupriavidus basilensis FW507-4G11 RR42_RS28290 DNA-binding protein strong 27 87
  Pseudomonas fluorescens FW300-N2C3 AO356_23675 hydroxyacid dehydrogenase insig. 29 92
  Shewanella sp. ANA-3 Shewana3_0319 XRE family transcriptional regulator (RefSeq) strong 27 95
  Pantoea sp. MT58 IAI47_21310 helix-turn-helix domain-containing protein sig. 30 85
  Pseudomonas fluorescens FW300-N2E3 AO353_24090 DNA-binding protein insig. 30 72