Homologs of MMP_RS06920 from Methanococcus maripaludis S2

AAA family ATPase
SEED: DNA double-strand break repair Rad50 ATPase
KEGG: exonuclease SbcC

207 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis S2 MMP_RS06920 AAA family ATPase strong 100 100
o Methanococcus maripaludis JJ MMJJ_RS07435 SMC family ATPase cofit 94 100
  Synechocystis sp000284455 PCC 6803 SGL_RS04230 exonuclease subunit SbcC strong 29 21
  Alteromonas macleodii MIT1002 MIT1002_00898 Nuclease SbcCD subunit C cofit 25 18
  Escherichia coli ECRC100 OKFHMN_08555 sbcC exonuclease subunit SbcC cofit 22 31
  Escherichia coli ECRC101 MCAODC_27780 sbcC exonuclease subunit SbcC insig. 22 31
  Escherichia coli ECRC102 NIAGMN_06610 sbcC exonuclease subunit SbcC cofit 22 31
  Escherichia coli ECRC98 JDDGAC_12210 sbcC exonuclease subunit SbcC insig. 22 31
  Escherichia coli ECRC99 KEDOAH_19410 sbcC exonuclease subunit SbcC no data 22 31
  Klebsiella pneumoniae MRSN742743 KFA93_RS03990 sbcC;go_function=exonuclease exonuclease subunit SbcC insig. 26 19
  Klebsiella pneumoniae MKP103 KDGMDA_14295 exonuclease subunit SbcC insig. 26 19
  Escherichia fergusonii Becca EFB2_03660 Nuclease SbcCD subunit C insig. 21 31
  Escherichia coli ECOR38 HEPCGN_07195 sbcC exonuclease subunit SbcC insig. 25 19
  Escherichia coli BL21 ECD_00345 exonuclease, dsDNA, ATP-dependent insig. 21 31
  Escherichia coli ECRC62 BNILDI_22900 sbcC exonuclease subunit SbcC insig. 21 31
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03279 Nuclease SbcCD subunit C insig. 21 31
  Escherichia coli BW25113 b0397 sbcC exonuclease, dsDNA, ATP-dependent (NCBI) sig. 22 31
  Escherichia coli ECOR27 NOLOHH_01485 sbcC exonuclease subunit SbcC insig. 21 31
  Enterobacter asburiae PDN3 EX28DRAFT_2577 exonuclease SbcC insig. 26 17
  Escherichia coli Nissle 1917 ECOLIN_RS02400 exonuclease subunit SbcC insig. 21 31
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1706 ATPase involved in DNA repair sig. 28 17
  Enterobacter sp. TBS_079 MPMX20_00984 Nuclease SbcCD subunit C insig. 26 17
  Pseudomonas syringae pv. syringae B728a Psyr_1817 condensin subunit Smc insig. 22 35
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1817 condensin subunit Smc insig. 22 35
  Rahnella sp. WP5 EX31_RS22030 exonuclease subunit SbcC insig. 27 16
  Pseudomonas segetis P6 ACVTMO_RS17485 SbcC/MukB-like Walker B domain-containing protein insig. 26 17
  Serratia liquefaciens MT49 IAI46_04765 exonuclease subunit SbcC insig. 26 17
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4293 Exonuclease SbcC insig. 25 20
  Pseudomonas segetis P6 ACVTMO_RS11045 smc chromosome segregation protein SMC insig. 24 28
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4082 Chromosome partition protein smc insig. 22 35
  Pseudomonas sp. SVBP6 COO64_RS18550 smc chromosome segregation protein SMC insig. 22 35
  Pseudomonas stutzeri RCH2 Psest_2510 chromosome segregation protein SMC, common bacterial type insig. 22 36
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3855 Chromosome partition protein smc insig. 25 17
  Pseudomonas protegens RBAN4 FABNJH_09820 smc chromosome segregation protein SMC insig. 25 18
  Klebsiella michiganensis M5al BWI76_RS06220 exonuclease subunit SbcC sig. 25 17
  Pseudomonas sp. DMC3 GFF698 Chromosome partition protein Smc insig. 25 27
  Pseudomonas aeruginosa MRSN321 DY961_RS25095 SbcC/MukB-like Walker B domain-containing protein sig. 24 22
  Pseudomonas aeruginosa PUPa3 DQ20_RS57550 SbcC/MukB-like Walker B domain-containing protein insig. 24 22
  Pseudomonas fluorescens SBW25 PFLU_RS22490 chromosome segregation protein SMC insig. 26 18
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22490 chromosome segregation protein SMC insig. 26 18
  Pectobacterium carotovorum WPP14 HER17_RS16050 AAA family ATPase insig. 25 15
  Pseudomonas sp. RS175 PFR28_01066 Chromosome partition protein Smc insig. 25 18
  Alteromonas macleodii MIT1002 MIT1002_01922 Chromosome partition protein Smc insig. 28 23
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04320 Chromosome partition protein Smc insig. 26 18
  Pseudomonas orientalis W4I3 QF045_RS22680 chromosome segregation protein SMC cofit 26 18
  Pseudomonas simiae WCS417 PS417_20875 chromosome segregation protein SMC sig. 26 18
  Acinetobacter radioresistens SK82 MPMX26_02403 hypothetical protein cofit 25 15
  Magnetospirillum magneticum AMB-1 AMB_RS14680 ABC transporter ATP-binding protein no data 36 8
  Pseudomonas fluorescens FW300-N2E3 AO353_00720 chromosome segregation protein SMC sig. 26 17
  Methanococcus maripaludis S2 MMP_RS07190 chromosome segregation protein SMC strong 24 35
  Methanococcus maripaludis JJ MMJJ_RS07165 chromosome segregation protein SMC strong 25 28
  Pseudomonas fluorescens FW300-N2C3 AO356_02550 chromosome segregation protein SMC insig. 24 17
  Synechocystis sp000284455 PCC 6803 SGL_RS05960 chromosome segregation protein SMC strong 25 16
  Pseudomonas aeruginosa PA14 IKLFDK_02700 Nuclease SbcCD subunit C sig. 23 22
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2334 Chromosome partition protein smc insig. 25 17
  Pantoea sp. MT58 IAI47_14865 AAA family ATPase insig. 27 14
  Pseudomonas stutzeri RCH2 Psest_3540 hypothetical protein insig. 26 25
  Erwinia amylovora T8 OLJFJH_18195 exonuclease subunit SbcC insig. 25 16
  Pseudomonas sp. S08-1 OH686_02605 chromosome segregation protein SMC cofit 22 35
  Pseudomonas fluorescens FW300-N2E3 AO353_19905 ABC transporter insig. 34 13
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS15160 AAA family ATPase cofit 27 14
  Pseudomonas aeruginosa MRSN321 DY961_RS19255 smc;go_function=ATP chromosome segregation protein SMC sig. 26 18
  Pseudomonas aeruginosa PA14 IKLFDK_07280 chromosome segregation protein SMC sig. 26 18
  Pseudomonas aeruginosa PUPa3 DQ20_RS53390 smc;go_function=ATP chromosome segregation protein SMC insig. 26 18
  Synechococcus elongatus PCC 7942 Synpcc7942_2563 exonuclease SbcC strong 22 16
  Synechococcus elongatus PCC 7942 Synpcc7942_2009 hypothetical protein strong 30 14
  Acinetobacter radioresistens SK82 MPMX26_02403 hypothetical protein cofit 27 15
  Synechococcus elongatus PCC 7942 Synpcc7942_2045 smc condensin subunit Smc strong 26 17
  Fusobacterium nucleatum SB010 HUW76_06530 chromosome segregation protein SMC strong 25 16
  Shewanella sp. ANA-3 Shewana3_1567 chromosome segregation protein SMC (RefSeq) insig. 25 23
  Marinobacter adhaerens HP15 HP15_1533 chromosome segregation protein SMC strong 24 22
  Pectobacterium carotovorum WPP14 HER17_RS14170 ABC transporter ATP-binding protein insig. 36 9
  Phaeobacter inhibens DSM 17395 PGA1_262p00900 ABC transporter, ATP-binding protein insig. 34 9
  Herbaspirillum seropedicae SmR1 HSERO_RS14240 molybdenum ABC transporter ATP-binding protein insig. 26 13
  Pseudomonas sp. SVBP6 COO64_RS05455 AAA family ATPase insig. 24 26
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03260 multidrug ABC transporter ATP-binding protein strong 36 8
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26125 sbcC exonuclease subunit SbcC cofit 25 17
  Erwinia tracheiphila SCR3 LU632_RS18935 exonuclease subunit SbcC insig. 25 17
  Pseudomonas sp. BP01 JOY50_RS00245 smc chromosome segregation protein SMC insig. 24 27
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11105 ATP-binding cassette family protein insig. 34 11
  Pseudomonas putida KT2440 PP_4276 Chromosome partition protein Smc sig. 22 35
  Enterobacter asburiae PDN3 EX28DRAFT_0458 Predicted ATP-dependent endonuclease of the OLD family insig. 45 5
  Shewanella amazonensis SB2B Sama_1514 SMC family protein (RefSeq) insig. 25 27
  Pseudomonas fluorescens FW300-N2C3 AO356_24625 chromosome segregation protein SMC insig. 25 16
  Shewanella loihica PV-4 Shew_2379 chromosome segregation protein SMC (RefSeq) sig. 24 18
  Acinetobacter radioresistens SK82 MPMX26_02462 Chromosome partition protein Smc insig. 24 18
  Dickeya dianthicola 67-19 HGI48_RS05475 AAA family ATPase insig. 24 17
  Dickeya dianthicola ME23 DZA65_RS05800 AAA family ATPase insig. 24 17
  Sphingobium sp. HT1-2 GFF1065 Chromosome partition protein smc cofit 22 20
  Fusobacterium nucleatum SB010 HUW76_07215 ABC transporter ATP-binding protein no data 36 8
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2293 cell division ATP-binding protein FtsE insig. 28 12
  Pseudomonas putida KT2440 PP_2024 Exonuclease SbcC sig. 27 17
  Pseudomonas protegens RBAN4 FABNJH_14230 Exonuclease SbcCD, C subunit insig. 26 17
  Azospirillum sp. SherDot2 MPMX19_04316 hypothetical protein insig. 24 15
  Escherichia coli ECOR38 HEPCGN_27320 ABC transporter ATP-binding protein insig. 26 15
  Shewanella oneidensis MR-1 SO2898 SMC family protein (NCBI ptt file) strong 26 16
  Synechococcus elongatus PCC 7942 Synpcc7942_0560 ATPase no data 40 7
  Variovorax sp. SCN45 GFF6936 ABC transporter, ATP-binding protein insig. 38 8
  Bifidobacterium breve UCC2003 BBR_RS14670 excinuclease ABC subunit UvrA cofit 35 9
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3825 thiol reductant ABC exporter, CydD subunit insig. 31 8
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12990 chromosome segregation protein SMC cofit 26 21
  Acinetobacter baumannii LAC-4 RR41_RS14790 AAA family ATPase insig. 26 17
  Pseudomonas sp. RS175 PFR28_01588 hypothetical protein insig. 21 26
  Bosea sp. OAE506 ABIE41_RS05155 ATP-binding cassette domain-containing protein insig. 37 8
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16065 ABC transporter ATP-binding protein strong 34 9
  Pseudomonas sp. SVBP6 COO64_RS23020 modC molybdenum ABC transporter ATP-binding protein insig. 25 12
  Dickeya dadantii 3937 DDA3937_RS05415 hypothetical protein strong 24 17
  Cupriavidus basilensis FW507-4G11 RR42_RS23840 hypothetical protein insig. 40 7
  Dickeya dianthicola 67-19 HGI48_RS20100 amino acid ABC transporter ATP-binding protein insig. 33 8
  Marinobacter adhaerens HP15 HP15_1576 GTP-binding protein insig. 23 33
  Bifidobacterium breve UCC2003 BBR_RS16840 chromosome segregation protein SMC insig. 21 52
  Dechlorosoma suillum PS Dsui_0616 ABC-type antimicrobial peptide transport system, ATPase component insig. 40 7
  Rahnella sp. WP5 EX31_RS17055 ABC transporter ATP-binding protein insig. 28 11
  Rahnella sp. WP5 EX31_RS17580 ABC transporter ATP-binding protein insig. 26 13
  Pseudomonas fluorescens FW300-N2E3 AO353_23675 chromosome segregation protein SMC insig. 25 16
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2313 condensin subunit Smc insig. 22 21
  Acinetobacter baumannii LAC-4 RR41_RS15275 chromosome segregation protein SMC insig. 22 30
  Bifidobacterium breve UCC2003 BBR_RS17290 Fused ATP-binding protein and permease of ABC transporter strong 35 8
  Vibrio cholerae E7946 ATCC 55056 CSW01_16845 nuclease SbcCD subunit C insig. 26 19
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_618 Exonuclease SbcC insig. 24 16
  Bacteroides ovatus ATCC 8483 BACOVA_00395 exonuclease SbcCD, C subunit insig. 23 19
  Azospirillum sp. SherDot2 MPMX19_04889 Chromosome partition protein Smc insig. 21 22
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15245 ABC transporter ATP-binding protein strong 33 8
  Bacteroides thetaiotaomicron VPI-5482 BT0245 ATP-dependent exonuclease sbcC (NCBI ptt file) sig. 22 19
  Methanococcus maripaludis JJ MMJJ_RS02310 ABC transporter ATP-binding protein insig. 37 8
  Methanococcus maripaludis S2 MMP_RS02765 ABC transporter ATP-binding protein insig. 37 8
  Sphingobium sp. HT1-2 GFF346 Molybdenum ABC transporter ATP-binding protein ModC cofit 25 12
  Variovorax sp. SCN45 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family insig. 45 5
  Pseudomonas protegens RBAN4 FABNJH_11180 macB1 Macrolide export ATP-binding/permease protein MacB 1 insig. 37 8
  Pseudomonas sp. BP01 JOY50_RS16435 AAA family ATPase insig. 26 17
  Azospirillum brasilense Sp245 AZOBR_RS20260 chromosome segregation ATPase sig. 20 23
  Cellulophaga baltica 18 M666_RS14035 ABC transporter ATP-binding protein no data 35 7
  Cellulophaga baltica 18 M666_RS11895 ABC transporter ATP-binding protein insig. 33 8
  Xanthobacter sp. DMC5 GFF4380 Lipoprotein-releasing system ATP-binding protein LolD insig. 33 8
  Castellaniella sp019104865 MT123 ABCV34_RS02920 ABC transporter ATP-binding protein insig. 35 8
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05245 chromosome segregation protein SMC strong 35 7
  Burkholderia phytofirmans PsJN BPHYT_RS27760 ABC transporter insig. 33 8
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3308 Exonuclease SbcC strong 23 18
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4632 Exonuclease SbcC insig. 22 18
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_618 Exonuclease SbcC insig. 31 8
  Pseudomonas sp. DMC3 GFF3026 hypothetical protein insig. 22 18
  Variovorax sp. OAS795 ABID97_RS09245 ABC transporter ATP-binding protein no data 33 6
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04345 lipoprotein-releasing system ATP-binding protein LolD no data 33 8
  Klebsiella michiganensis M5al BWI76_RS26395 cell division protein FtsE strong 26 13
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09925 AAA family ATPase insig. 23 15
  Caulobacter crescentus NA1000 CCNA_00377 chromosome partition protein Smc insig. 21 21
  Caulobacter crescentus NA1000 Δfur CCNA_00377 chromosome partition protein Smc cofit 21 21
  Fusobacterium nucleatum SB010 HUW76_02490 ABC transporter ATP-binding protein cofit 38 7
  Herbaspirillum seropedicae SmR1 HSERO_RS11925 ABC transporter insig. 35 8
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07635 ABC transporter ATP-binding protein no data 35 7
  Pseudomonas syringae pv. syringae B728a Psyr_1714 exonuclease SbcC insig. 31 8
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1714 exonuclease SbcC insig. 31 8
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2204 ABC-type antimicrobial peptide transport system, ATPase component strong 30 8
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00165 macrolide ABC transporter ATP-binding protein strong 30 8
  Mycobacterium tuberculosis H37Rv Rv1621c Probable 'component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein ABC transporter CydD strong 29 6
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12805 ftsE cell division ATP-binding protein FtsE cofit 26 11
  Erwinia tracheiphila SCR3 LU632_RS19275 ftsE cell division ATP-binding protein FtsE strong 26 11
  Phaeobacter inhibens DSM 17395 PGA1_c00780 putative chromosome segregation protein SMC strong 21 18
  Pseudomonas sp. BP01 JOY50_RS16435 AAA family ATPase insig. 31 8
  Fusobacterium nucleatum SB010 HUW76_06530 chromosome segregation protein SMC strong 35 8
  Magnetospirillum magneticum AMB-1 AMB_RS12790 ABC transporter ATP-binding protein insig. 33 8
  Pseudomonas putida KT2440 PP_2024 Exonuclease SbcC sig. 31 8
  Sphingobium sp. HT1-2 GFF3327 Cell-division-associated, ABC-transporter-like signaling protein FtsE cofit 27 11
  Shewanella amazonensis SB2B Sama_1268 exonuclease SbcC, putative (RefSeq) sig. 26 14
  Kangiella aquimarina DSM 16071 B158DRAFT_0441 cell division ATP-binding protein FtsE strong 25 11
  Mycobacterium tuberculosis H37Rv Rv2922c Probable chromosome partition protein Smc sig. 23 17
  Bacteroides thetaiotaomicron VPI-5482 BT0072 putative ABC transporter, ATP-binding protein (NCBI ptt file) no data 26 8
  Pseudomonas orientalis W4I3 QF045_RS14410 SbcC/MukB-like Walker B domain-containing protein insig. 24 17
  Pseudomonas simiae WCS417 PS417_20460 chromosome segregation protein SMC insig. 37 5
  Rhodopseudomonas palustris CGA009 TX73_018175 ABC transporter ATP-binding protein sig. 34 8
  Fusobacterium nucleatum SB010 HUW76_00025 DNA replication/repair protein RecF no data 33 7
  Acinetobacter baumannii LAC-4 RR41_RS01330 ABC transporter ATP-binding protein/permease insig. 33 8
  Dinoroseobacter shibae DFL-12 Dshi_0638 ABC transporter related (RefSeq) insig. 32 8
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3310.1 Chromosome partition protein smc strong 22 35
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16410 ABC transporter ATP-binding protein cofit 35 9
  Pseudomonas protegens RBAN4 FABNJH_14230 Exonuclease SbcCD, C subunit insig. 31 8
  Pseudomonas sp. S08-1 OH686_22030 lipoprotein releasing system, ATP-binding protein no data 30 8
  Alteromonas macleodii MIT1002 MIT1002_03820 putative ABC transporter ATP-binding protein/MT1014 insig. 27 8
  Rhodopseudomonas palustris CGA009 TX73_001015 ABC transporter ATP-binding protein insig. 34 8
  Pseudomonas aeruginosa PA14 IKLFDK_02700 Nuclease SbcCD subunit C sig. 31 8
  Pseudomonas aeruginosa PUPa3 DQ20_RS57550 SbcC/MukB-like Walker B domain-containing protein insig. 31 8
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06975 ABC transporter ATP-binding protein no data 30 8
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07485 macrolide ABC transporter ATP-binding protein strong 30 8
  Pseudomonas fluorescens SBW25 PFLU_RS17140 AAA family ATPase insig. 30 8
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17140 AAA family ATPase sig. 30 8
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03325 hypothetical protein cofit 30 8
  Pseudomonas simiae WCS417 PS417_15120 chromosome segregation protein SMC strong 30 8
  Kangiella aquimarina DSM 16071 B158DRAFT_0366 DNA replication and repair protein RecF strong 28 11
  Pseudomonas simiae WCS417 PS417_15120 chromosome segregation protein SMC strong 24 17
  Synechocystis sp000284455 PCC 6803 SGL_RS04230 exonuclease subunit SbcC strong 24 16
  Pseudomonas syringae pv. syringae B728a Psyr_2618 ABC transporter:Protein of unknown function DUF214 sig. 34 8
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2618 ABC transporter:Protein of unknown function DUF214 insig. 34 8
  Pseudomonas aeruginosa MRSN321 DY961_RS25095 SbcC/MukB-like Walker B domain-containing protein sig. 31 8
  Erwinia amylovora T8 OLJFJH_16200 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC strong 33 6
  Rhizobium sp. OAE497 ABIE40_RS24365 ATP-binding cassette domain-containing protein insig. 32 9
  Kangiella aquimarina DSM 16071 B158DRAFT_1775 condensin subunit Smc strong 26 21
  Cupriavidus basilensis FW507-4G11 RR42_RS11915 chromosome segregation protein SMC no data 24 27
  Rhodopseudomonas palustris CGA009 TX73_023305 chromosome segregation protein SMC no data 20 19
  Acinetobacter baumannii LAC-4 RR41_RS08335 DUF1983 domain-containing protein insig. 20 44
  Bifidobacterium breve UCC2003 BBR_RS16840 chromosome segregation protein SMC insig. 35 9
  Alteromonas macleodii MIT1002 MIT1002_02825 putative ABC transporter ATP-binding protein/MT1014 insig. 33 8
  Ralstonia solanacearum PSI07 RPSI07_RS07250 ATP-dependent endonuclease insig. 36 5
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3308 Exonuclease SbcC strong 30 8
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03325 hypothetical protein cofit 24 17
  Pseudomonas segetis P6 ACVTMO_RS10160 lolD lipoprotein-releasing ABC transporter ATP-binding protein LolD no data 33 8
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1764 AAA domain insig. 31 9
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4632 Exonuclease SbcC insig. 30 8