Homologs of HER17_RS14965 from Pectobacterium carotovorum WPP14

endonuclease VIII
SEED: Endonuclease VIII
KEGG: endonuclease VIII

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pectobacterium carotovorum WPP14 HER17_RS14965 endonuclease VIII insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_01348 Endonuclease 8 insig. 77 100
o Enterobacter asburiae PDN3 EX28DRAFT_2273 Formamidopyrimidine-DNA glycosylase insig. 76 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4632 Endonuclease VIII insig. 75 100
o Escherichia coli ECOR38 HEPCGN_01220 nei endonuclease VIII cofit 74 100
o Escherichia coli ECOR27 NOLOHH_23375 nei endonuclease VIII insig. 74 100
o Escherichia coli ECRC62 BNILDI_21370 nei endonuclease VIII insig. 74 100
o Escherichia coli BW25113 b0714 nei endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) insig. 74 100
o Escherichia fergusonii Becca EFB2_03389 Endonuclease 8 insig. 74 100
o Escherichia coli Nissle 1917 ECOLIN_RS03820 endonuclease VIII no data 74 100
o Escherichia coli ECRC101 OKFHMN_06990 nei endonuclease VIII insig. 74 100
o Escherichia coli ECRC102 NIAGMN_05045 nei endonuclease VIII insig. 74 100
o Escherichia coli ECRC99 KEDOAH_20975 nei endonuclease VIII no data 74 100
o Escherichia coli BL21 ECD_00674 endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase insig. 74 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03003 Endonuclease 8 insig. 74 100
o Escherichia coli ECRC98 JDDGAC_10645 nei endonuclease VIII no data 74 100
o Klebsiella michiganensis M5al BWI76_RS08380 endonuclease VIII insig. 75 100
o Serratia liquefaciens MT49 IAI46_06245 endonuclease VIII insig. 72 100
o Dickeya dadantii 3937 DDA3937_RS06430 endonuclease VIII insig. 70 100
o Pantoea sp. MT58 IAI47_13775 endonuclease VIII insig. 66 100
o Rahnella sp. WP5 EX31_RS23405 endonuclease VIII insig. 66 100
  Escherichia coli ECRC101 MCAODC_26210 Endonuclease 8 insig. 74 71
o Alteromonas macleodii MIT1002 MIT1002_02957 DNA glycosylase/AP lyase Nei insig. 49 100
o Marinobacter adhaerens HP15 HP15_4107 endonuclease 8 cofit 40 95
  Rhodopseudomonas palustris CGA009 TX73_000435 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 29 100
o Mycobacterium tuberculosis H37Rv Rv3297 Probable endonuclease VIII Nei insig. 28 100
  Mycobacterium tuberculosis H37Rv Rv2464c Possible DNA glycosylase insig. 27 86
  Rhizobium sp. OAE497 ABIE40_RS01590 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 26 100
  Azospirillum sp. SherDot2 MPMX19_02764 Formamidopyrimidine-DNA glycosylase insig. 27 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 27 100
  Azospirillum brasilense Sp245 AZOBR_RS01270 5-hydroxymethyluracil DNA glycosylase insig. 26 100
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5281.1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 28 100
  Sinorhizobium meliloti 1021 SMc01154 formamidopyrimidine-DNA glycosylase insig. 24 100
  Rhodospirillum rubrum S1H Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) insig. 29 100
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 28 100
  Phaeobacter inhibens DSM 17395 PGA1_c36490 formamidopyrimidine-DNA glycosylase MutM insig. 25 100
  Agrobacterium fabrum C58 Atu0321 formamidopyrimidine-DNA glycosylase insig. 23 100
  Rhodanobacter denitrificans MT42 LRK55_RS10505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 28 100
  Dechlorosoma suillum PS Dsui_1031 formamidopyrimidine-DNA glycosylase Fpg insig. 27 100
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 100
  Alteromonas macleodii MIT1002 MIT1002_00057 Formamidopyrimidine-DNA glycosylase insig. 26 100
  Rhodanobacter sp. FW510-T8 OKGIIK_13060 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 26 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3586 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 27 100
  Mycobacterium tuberculosis H37Rv Rv2924c Probable formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA glycosylase) insig. 27 100
  Caulobacter crescentus NA1000 CCNA_03822 formamidopyrimidine-DNA glycosylase insig. 25 100
  Caulobacter crescentus NA1000 Δfur CCNA_03822 formamidopyrimidine-DNA glycosylase cofit 25 100
  Castellaniella sp019104865 MT123 ABCV34_RS09265 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 27 100
  Lysobacter sp. OAE881 ABIE51_RS00335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 28 100
  Dinoroseobacter shibae DFL-12 Dshi_3369 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 23 100
  Bosea sp. OAE506 ABIE41_RS04205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 27 100
  Magnetospirillum magneticum AMB-1 AMB_RS03255 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 97
  Pseudomonas sp. RS175 PFR28_04272 Formamidopyrimidine-DNA glycosylase insig. 26 100
  Desulfovibrio vulgaris Miyazaki F DvMF_2449 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 30 59
  Cupriavidus basilensis FW507-4G11 RR42_RS02040 formamidopyrimidine-DNA glycosylase insig. 25 100
  Shewanella oneidensis MR-1 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) insig. 24 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_979 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 26 100
  Kangiella aquimarina DSM 16071 B158DRAFT_0778 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) cofit 24 100
  Pseudomonas syringae pv. syringae B728a Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 26 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 26 100
  Vibrio cholerae E7946 ATCC 55056 CSW01_01175 formamidopyrimidine-DNA glycosylase insig. 24 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 28 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2309 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 26 100
  Pseudomonas fluorescens FW300-N2C3 AO356_13270 5-hydroxymethyluracil DNA glycosylase insig. 28 86
  Pseudomonas fluorescens FW300-N2E3 AO353_08320 5-hydroxymethyluracil DNA glycosylase insig. 26 100
  Shewanella loihica PV-4 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 24 100
  Marinobacter adhaerens HP15 HP15_3493 formamidopyrimidine-DNA glycosylase insig. 24 86
  Synechococcus elongatus PCC 7942 Synpcc7942_1323 fpg DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 25 100
  Shewanella amazonensis SB2B Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) sig. 24 100
  Pantoea sp. MT58 IAI47_00635 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 100
  Herbaspirillum seropedicae SmR1 HSERO_RS19545 formamidopyrimidine-DNA glycosylase insig. 25 100
  Ralstonia solanacearum PSI07 RPSI07_RS22175 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 100
  Pseudomonas simiae WCS417 PS417_26870 5-hydroxymethyluracil DNA glycosylase insig. 26 86
  Pectobacterium carotovorum WPP14 HER17_RS20815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 100
  Ralstonia solanacearum GMI1000 RS_RS01975 formamidopyrimidine-DNA glycosylase insig. 25 100
  Pseudomonas putida KT2440 PP_5125 Formamidopyrimidine-DNA glycosylase insig. 26 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU3256 mutM formamidopyrimidine-DNA glycosylase (TIGR) insig. 29 59
  Pseudomonas fluorescens SBW25 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 26 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 26 86
  Pseudomonas stutzeri RCH2 Psest_0239 formamidopyrimidine-DNA glycosylase (fpg) insig. 26 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 25 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11125 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 100
  Ralstonia solanacearum UW163 UW163_RS02455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 25 100
  Serratia liquefaciens MT49 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 24 100
  Escherichia coli Nissle 1917 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 26 100
  Paraburkholderia graminis OAS925 ABIE53_000711 formamidopyrimidine-DNA glycosylase insig. 26 100
  Pseudomonas sp. S08-1 OH686_14125 DNA-formamidopyrimidine glycosylase cofit 25 86
  Rahnella sp. WP5 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 24 100
  Mycobacterium tuberculosis H37Rv Rv0944 Possible formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) insig. 30 54
  Acinetobacter radioresistens SK82 MPMX26_02486 Formamidopyrimidine-DNA glycosylase insig. 23 100
  Variovorax sp. SCN45 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 27 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS01720 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 24 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 23 100
  Burkholderia phytofirmans PsJN BPHYT_RS02870 formamidopyrimidine-DNA glycosylase insig. 26 100
  Escherichia coli ECOR27 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 25 100
  Shewanella sp. ANA-3 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) cofit 25 100
  Escherichia coli BL21 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase insig. 25 100
  Escherichia fergusonii Becca EFB2_00178 Formamidopyrimidine-DNA glycosylase insig. 25 100
  Escherichia coli ECOR38 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 25 100
  Escherichia coli ECRC101 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase insig. 25 100
  Escherichia coli ECRC101 MCAODC_06145 Formamidopyrimidine-DNA glycosylase insig. 25 100