Homologs of GFF658 from Sphingobium sp. HT1-2

DinG family ATP-dependent helicase YoaA
SEED: DinG family ATP-dependent helicase YoaA
KEGG: ATP-dependent DNA helicase DinG

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF658 DinG family ATP-dependent helicase YoaA cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2327 Rad3-related DNA helicases insig. 72 96
o Azospirillum sp. SherDot2 MPMX19_02014 3'-5' exonuclease DinG insig. 49 92
o Magnetospirillum magneticum AMB-1 AMB_RS18265 ATP-dependent DNA helicase cofit 50 92
o Rhodospirillum rubrum S1H Rru_A3036 Helicase c2 (NCBI) insig. 50 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11470 ATP-dependent DNA helicase insig. 46 95
  Caulobacter crescentus NA1000 CCNA_02118 ATP-dependent helicase, dinG family sig. 50 76
  Caulobacter crescentus NA1000 Δfur CCNA_02118 ATP-dependent helicase, dinG family cofit 50 76
  Acidovorax sp. GW101-3H11 Ac3H11_2460 DinG family ATP-dependent helicase YoaA insig. 29 75
  Cupriavidus basilensis FW507-4G11 RR42_RS07580 helicase strong 29 71
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00533 ATP-dependent DNA helicase DinG insig. 28 75
  Fusobacterium nucleatum SB010 HUW76_04565 ATP-dependent DNA helicase strong 22 75
  Burkholderia phytofirmans PsJN BPHYT_RS12495 helicase insig. 29 73
  Pseudomonas aeruginosa MRSN321 DY961_RS07235 dinG;go_function=DNA ATP-dependent DNA helicase DinG sig. 27 74
  Pseudomonas aeruginosa PA14 IKLFDK_04780 ATP-dependent DNA helicase DinG insig. 27 74
  Pseudomonas aeruginosa PUPa3 DQ20_RS45550 dinG;go_function=DNA ATP-dependent DNA helicase DinG sig. 27 74
  Dickeya dadantii 3937 DDA3937_RS11240 ATP-dependent DNA helicase insig. 33 27
  Vibrio cholerae E7946 ATCC 55056 CSW01_09290 ATP-dependent DNA helicase DinG insig. 26 74
  Pectobacterium carotovorum WPP14 HER17_RS11290 ATP-dependent DNA helicase insig. 33 27
  Escherichia coli BL21 ECD_01778 putative ATP-dependent helicase, DinG family no data 33 27
  Escherichia fergusonii Becca EFB2_02192 putative ATP-dependent DNA helicase YoaA insig. 33 27
  Escherichia coli ECOR27 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 27
  Escherichia coli ECOR38 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 27
  Escherichia coli ECRC100 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 27
  Escherichia coli ECRC101 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 27
  Escherichia coli ECRC102 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA cofit 33 27
  Escherichia coli ECRC62 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 27
  Escherichia coli ECRC98 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA sig. 33 27
  Escherichia coli ECRC99 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA no data 33 27
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01925 putative ATP-dependent helicase DinG insig. 33 27
  Escherichia coli Nissle 1917 ECOLIN_RS10055 ATP-dependent DNA helicase no data 33 27
  Escherichia coli BW25113 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) sig. 33 27
  Klebsiella pneumoniae MKP103 KDGMDA_25135 ATP-dependent helicase insig. 34 27
  Dickeya dianthicola 67-19 HGI48_RS11275 ATP-dependent DNA helicase insig. 33 27
  Dickeya dianthicola ME23 DZA65_RS11620 ATP-dependent DNA helicase insig. 33 27
  Enterobacter asburiae PDN3 EX28DRAFT_0750 Rad3-related DNA helicases insig. 33 27
  Enterobacter sp. TBS_079 MPMX20_02714 putative ATP-dependent DNA helicase YoaA insig. 33 27
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02655 ATP-dependent DNA helicase cofit 32 27
  Pseudomonas sp. S08-1 OH686_04830 ATP-dependent helicase DinG/Rad3 insig. 27 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS06060 ATP-dependent DNA helicase insig. 33 24
  Paraburkholderia graminis OAS925 ABIE53_002724 ATP-dependent DNA helicase DinG insig. 32 27
  Pantoea sp. MT58 IAI47_08820 ATP-dependent DNA helicase insig. 32 27
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2823 DinG family ATP-dependent helicase YoaA insig. 33 27
  Alteromonas macleodii MIT1002 MIT1002_02593 putative ATP-dependent helicase DinG insig. 33 26
  Serratia liquefaciens MT49 IAI46_14550 ATP-dependent DNA helicase insig. 32 26
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01464 ATP-dependent DNA helicase DinG cofit 25 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01530 ATP-dependent DNA helicase insig. 32 27
  Ralstonia solanacearum UW163 UW163_RS14840 ATP-dependent DNA helicase insig. 32 27
  Castellaniella sp019104865 MT123 ABCV34_RS01875 ATP-dependent DNA helicase insig. 34 27
  Klebsiella michiganensis M5al BWI76_RS17815 ATP-dependent helicase insig. 33 27
  Pseudomonas sp. BP01 JOY50_RS24145 dinG ATP-dependent DNA helicase DinG insig. 26 74
  Ralstonia solanacearum GMI1000 RS_RS08195 ATP-dependent DNA helicase insig. 31 27
  Pseudomonas simiae WCS417 PS417_06510 ATP-dependent DNA helicase DinG strong 26 74
  Pseudomonas orientalis W4I3 QF045_RS09310 ATP-dependent DNA helicase DinG insig. 25 74
  Herbaspirillum seropedicae SmR1 HSERO_RS14855 helicase strong 33 26
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 strong 26 74
  Ralstonia solanacearum PSI07 RPSI07_RS15960 ATP-dependent DNA helicase no data 31 27
  Pseudomonas fluorescens FW300-N2C3 AO356_05425 ATP-dependent DNA helicase DinG strong 26 74
  Pseudomonas putida KT2440 PP_1125 putative Helicase sig. 26 74
  Pseudomonas sp. DMC3 GFF2161 ATP-dependent DNA helicase DinG cofit 26 74
  Pseudomonas fluorescens SBW25 PFLU_RS06540 ATP-dependent DNA helicase DinG insig. 25 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06540 ATP-dependent DNA helicase DinG insig. 25 74
  Ralstonia sp. UNC404CL21Col ABZR87_RS13325 ATP-dependent DNA helicase insig. 32 28
  Dechlorosoma suillum PS Dsui_2149 DNA helicase, Rad3 strong 32 27
  Vibrio cholerae E7946 ATCC 55056 CSW01_09930 ATP-dependent DNA helicase insig. 32 27
  Pseudomonas sp. RS175 PFR28_00520 ATP-dependent DNA helicase DinG insig. 26 74
  Pseudomonas fluorescens FW300-N2E3 AO353_17020 ATP-dependent DNA helicase DinG strong 26 74
  Erwinia tracheiphila SCR3 LU632_RS13150 ATP-dependent DNA helicase insig. 33 25
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_22440 ATP-dependent helicase cofit 33 25
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15830 ATP-dependent DNA helicase insig. 33 28
  Erwinia amylovora T8 OLJFJH_13085 ATP-dependent helicase insig. 31 27
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 sig. 25 74
  Methylophilus sp. DMC18 GFF2564 putative ATP-dependent DNA helicase YoaA insig. 33 27
  Rhodanobacter sp. FW510-T8 OKGIIK_02195 dinG helicase insig. 32 28
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 no data 26 74
  Rahnella sp. WP5 EX31_RS10615 ATP-dependent DNA helicase insig. 32 27
  Pseudomonas syringae pv. syringae B728a Psyr_3856 Helicase c2 sig. 26 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3856 Helicase c2 insig. 26 74
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19750 ATP-dependent DNA helicase insig. 33 25
  Marinobacter adhaerens HP15 HP15_1856 helicase c2 strong 25 75
  Rhodanobacter denitrificans MT42 LRK55_RS12465 ATP-dependent DNA helicase insig. 33 28
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12765 ATP-dependent DNA helicase insig. 33 28
  Acidovorax sp. GW101-3H11 Ac3H11_4422 ATP-dependent helicase DinG/Rad3 no data 25 71
  Enterobacter asburiae PDN3 EX28DRAFT_2193 Rad3-related DNA helicases insig. 24 71
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02914 putative ATP-dependent helicase DinG insig. 25 73
  Variovorax sp. SCN45 GFF986 DinG family ATP-dependent helicase YoaA insig. 32 26
  Escherichia coli BL21 ECD_00766 ATP-dependent DNA helicase insig. 25 73
  Escherichia coli BW25113 b0799 dinG ATP-dependent DNA helicase (NCBI) strong 25 73
  Escherichia coli ECOR38 HEPCGN_01765 dinG ATP-dependent DNA helicase DinG insig. 25 73
  Enterobacter sp. TBS_079 MPMX20_01426 ATP-dependent DNA helicase DinG insig. 24 71
  Escherichia coli ECRC100 OKFHMN_06280 dinG ATP-dependent DNA helicase DinG insig. 25 73
  Escherichia coli ECRC101 MCAODC_25495 dinG ATP-dependent DNA helicase DinG insig. 25 73
  Escherichia coli ECRC102 NIAGMN_04325 dinG ATP-dependent DNA helicase DinG cofit 25 73
  Escherichia coli ECRC98 JDDGAC_09915 dinG ATP-dependent DNA helicase DinG insig. 25 73
  Escherichia coli ECRC99 KEDOAH_21630 dinG ATP-dependent DNA helicase DinG no data 25 73
  Kangiella aquimarina DSM 16071 B158DRAFT_2492 Rad3-related DNA helicases cofit 30 23
  Escherichia fergusonii Becca EFB2_03306 ATP-dependent DNA helicase DinG cofit 25 73
  Escherichia coli Nissle 1917 ECOLIN_RS04255 ATP-dependent DNA helicase DinG no data 25 73
  Mycobacterium tuberculosis H37Rv Rv1329c Probable ATP-dependent helicase DinG insig. 33 26
  Pseudomonas sp. SVBP6 COO64_RS17020 dinG ATP-dependent DNA helicase DinG cofit 26 74