Homologs of PS417_27690 from Pseudomonas simiae WCS417

XRE family transcriptional regulator
SEED: Putrescine utilization regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas fluorescens SBW25 PFLU_RS29365 cupin domain-containing protein cofit 100 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29365 cupin domain-containing protein strong 100 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00005 HTH-type transcriptional regulator PuuR cofit 100 100
  Pseudomonas simiae WCS417 PS417_27690 XRE family transcriptional regulator strong 100 100
o Pseudomonas orientalis W4I3 QF045_RS02040 cupin domain-containing protein cofit 99 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2147 Putrescine utilization regulator strong 98 100
o Pseudomonas fluorescens FW300-N2C3 AO356_12635 XRE family transcriptional regulator strong 98 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4394 Putrescine utilization regulator strong 98 100
o Pseudomonas sp. DMC3 GFF387 HTH-type transcriptional regulator PuuR cofit 98 100
o Pseudomonas fluorescens FW300-N2E3 AO353_09140 XRE family transcriptional regulator strong 97 100
o Pseudomonas sp. RS175 PFR28_04396 HTH-type transcriptional regulator PuuR strong 97 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_815 Putrescine utilization regulator strong 97 100
o Pseudomonas sp. SVBP6 COO64_RS01380 cupin domain-containing protein insig. 92 100
o Pseudomonas syringae pv. syringae B728a Psyr_0238 Helix-turn-helix motif protein insig. 90 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0238 Helix-turn-helix motif protein insig. 90 100
o Pseudomonas putida KT2440 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine strong 87 100
o Pseudomonas sp. BP01 JOY50_RS09135 cupin domain-containing protein insig. 87 100
o Pseudomonas segetis P6 ACVTMO_RS00025 cupin domain-containing protein strong 84 100
o Pseudomonas aeruginosa MRSN321 DY961_RS12395 cupin domain-containing protein strong 83 100
o Pseudomonas aeruginosa PA14 IKLFDK_26945 XRE family transcriptional regulator strong 83 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS49735 cupin domain-containing protein strong 83 100
o Pseudomonas sp. S08-1 OH686_13700 Putrescine utilization regulator strong 81 100
o Pseudomonas stutzeri RCH2 Psest_3791 Predicted transcriptional regulators insig. 80 100
o Shewanella oneidensis MR-1 SO1265 transcriptional regulator, putative (NCBI ptt file) strong 66 100
o Shewanella amazonensis SB2B Sama_2646 XRE family transcriptional regulator (RefSeq) strong 68 100
o Shewanella loihica PV-4 Shew_0970 XRE family transcriptional regulator (RefSeq) strong 65 100
o Shewanella sp. ANA-3 Shewana3_3100 XRE family transcriptional regulator (RefSeq) strong 65 100
o Rhodospirillum rubrum S1H Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 52 98
o Xanthobacter sp. DMC5 GFF3339 HTH-type transcriptional regulator PuuR insig. 50 100
o Sinorhizobium meliloti 1021 SMc04387 aldehyde dehydrogenase insig. 50 100
o Azospirillum sp. SherDot2 MPMX19_04921 HTH-type transcriptional regulator PuuR insig. 52 98
o Burkholderia phytofirmans PsJN BPHYT_RS23170 XRE family transcriptional regulator insig. 50 100
o Bosea sp. OAE506 ABIE41_RS05345 cupin domain-containing protein insig. 48 99
o Agrobacterium fabrum C58 Atu3328 aldehyde dehydrogenase strong 48 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS12920 cupin domain-containing protein insig. 50 100
  Pseudomonas syringae pv. syringae B728a Psyr_2705 Helix-turn-helix motif protein sig. 50 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2705 Helix-turn-helix motif protein sig. 50 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4357 Putrescine utilization regulator sig. 51 100
  Pseudomonas sp. DMC3 GFF1632 HTH-type transcriptional regulator PuuR cofit 51 100
  Pseudomonas sp. SVBP6 COO64_RS10815 cupin domain-containing protein insig. 49 100
  Pseudomonas sp. BP01 JOY50_RS05840 cupin domain-containing protein insig. 49 100
o Azospirillum brasilense Sp245 AZOBR_RS19640 aldehyde dehydrogenase strong 48 98
  Pseudomonas putida KT2440 PP_2884 XRE family transcriptional regulator strong 49 100
  Pseudomonas fluorescens FW300-N2E3 AO353_29285 XRE family transcriptional regulator strong 51 100
o Pantoea sp. MT58 IAI47_07115 HTH-type transcriptional regulator PuuR insig. 45 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01235 HTH-type transcriptional regulator PuuR cofit 45 98
o Escherichia coli BL21 ECD_01276 repressor for the divergent puu operons, putrescine inducible strong 42 98
o Escherichia coli ECOR27 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR insig. 42 98
o Escherichia coli ECOR38 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR insig. 42 98
o Escherichia coli ECRC62 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR insig. 42 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02383 HTH-type transcriptional regulator PuuR insig. 42 98
o Escherichia coli BW25113 b1299 puuR DNA-binding transcriptional repressor (NCBI) strong 42 98
o Rahnella sp. WP5 EX31_RS17905 HTH-type transcriptional regulator PuuR insig. 41 98
o Escherichia coli ECRC100 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR cofit 42 98
o Escherichia coli ECRC101 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR insig. 42 98
o Escherichia coli ECRC102 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR insig. 42 98
o Escherichia coli ECRC98 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR insig. 42 98
o Escherichia coli ECRC99 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR no data 42 98
o Klebsiella pneumoniae MKP103 KDGMDA_18340 HTH-type transcriptional regulator PuuR insig. 42 98
o Serratia liquefaciens MT49 IAI46_17165 HTH-type transcriptional regulator PuuR strong 42 98
o Klebsiella michiganensis M5al BWI76_RS10700 XRE family transcriptional regulator strong 43 98
o Enterobacter asburiae PDN3 EX28DRAFT_1500 Predicted transcriptional regulators insig. 43 98
  Serratia liquefaciens MT49 IAI46_10550 HTH-type transcriptional regulator PuuR insig. 43 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3219 Transcriptional regulator, Cro/CI family insig. 35 99
  Pseudomonas sp. SVBP6 COO64_RS21060 helix-turn-helix domain-containing protein insig. 34 99
  Pseudomonas sp. BP01 JOY50_RS05765 helix-turn-helix domain-containing protein no data 34 99
  Pseudomonas fluorescens FW300-N2E3 AO353_24790 Cro/Cl family transcriptional regulator sig. 34 99
  Pseudomonas putida KT2440 PP_2868 Transcriptional regulator, Cro/CI family strong 34 99
  Pseudomonas aeruginosa MRSN321 DY961_RS10735 cupin domain-containing protein insig. 33 99
  Pseudomonas aeruginosa PA14 IKLFDK_28600 Cro/Cl family transcriptional regulator insig. 33 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS51325 cupin domain-containing protein insig. 33 99
o Cupriavidus basilensis FW507-4G11 RR42_RS00225 XRE family transcriptional regulator insig. 29 99
o Fusobacterium nucleatum SB010 HUW76_07320 helix-turn-helix domain-containing protein strong 26 100
o Acidovorax sp. GW101-3H11 Ac3H11_1308 Transcriptional regulator no data 32 99
  Fusobacterium nucleatum SB010 HUW76_01135 cupin domain-containing protein strong 28 100
  Rhizobium sp. OAE497 ABIE40_RS00150 MerR family transcriptional regulator insig. 33 99
  Pseudomonas simiae WCS417 PS417_06895 DNA-binding protein sig. 31 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS18365 cupin domain-containing protein strong 29 100
  Pseudomonas orientalis W4I3 QF045_RS09650 XRE family transcriptional regulator insig. 31 96
  Rahnella sp. WP5 EX31_RS21645 XRE family transcriptional regulator insig. 31 95
  Cupriavidus basilensis FW507-4G11 RR42_RS21695 DNA-binding protein sig. 26 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS16640 XRE family transcriptional regulator insig. 29 97
  Pseudomonas fluorescens FW300-N2C3 AO356_23675 hydroxyacid dehydrogenase insig. 31 93
  Pseudomonas orientalis W4I3 QF045_RS17975 XRE family transcriptional regulator cofit 30 94
  Desulfovibrio vulgaris Hildenborough JW710 DVU3066 DNA-binding protein (TIGR) sig. 28 95
  Burkholderia phytofirmans PsJN BPHYT_RS22055 DNA-binding protein strong 27 100
  Pseudomonas fluorescens SBW25 PFLU_RS06955 helix-turn-helix domain-containing protein insig. 31 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06955 helix-turn-helix domain-containing protein strong 31 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03130 transcriptional regulator, XRE family with cupin sensor insig. 27 100
o Phocaeicola dorei CL03T12C01 ABI39_RS13885 helix-turn-helix transcriptional regulator insig. 28 95
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17685 helix-turn-helix transcriptional regulator insig. 28 95
  Bacteroides thetaiotaomicron VPI-5482 BT2783 transcriptional regulator (NCBI ptt file) sig. 31 88
  Bacteroides ovatus ATCC 8483 BACOVA_01081 hypothetical protein insig. 30 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4417 Transcriptional regulator insig. 31 93
  Pseudomonas fluorescens FW300-N2C3 AO356_06745 DNA-binding protein sig. 29 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3201 Transcriptional regulator, MerR family strong 29 93
  Bosea sp. OAE506 ABIE41_RS10690 XRE family transcriptional regulator insig. 29 85
  Bacteroides stercoris CC31F HMPREF1181_RS01200 helix-turn-helix transcriptional regulator insig. 30 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4551 Transcriptional regulator, MerR family insig. 30 93
  Pseudomonas fluorescens SBW25 PFLU_RS18295 helix-turn-helix domain-containing protein insig. 29 94