Homologs of GFF4865 from Hydrogenophaga sp. GW460-11-11-14-LB1

Type IV pilus biogenesis protein PilF
SEED: Type IV pilus biogenesis protein PilF
KEGG: type IV pilus assembly protein PilF

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4865 Type IV pilus biogenesis protein PilF insig. 100 100
o Variovorax sp. OAS795 ABID97_RS14215 type IV pilus biogenesis/stability protein PilW strong 58 89
o Variovorax sp. SCN45 GFF993 Type IV pilus biogenesis protein PilF strong 52 96
o Acidovorax sp. GW101-3H11 Ac3H11_1792 Type IV pilus biogenesis protein PilF sig. 53 95
  Cupriavidus basilensis FW507-4G11 RR42_RS13150 pilus assembly protein PilW insig. 42 80
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15265 type IV pilus biogenesis/stability protein PilW no data 39 90
o Ralstonia solanacearum UW163 UW163_RS12730 type IV pilus biogenesis/stability protein PilW insig. 39 90
o Ralstonia solanacearum GMI1000 RS_RS06075 type IV pilus biogenesis/stability protein PilW no data 37 94
o Ralstonia solanacearum PSI07 RPSI07_RS18110 type IV pilus biogenesis/stability protein PilW insig. 38 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS10905 type IV pilus biogenesis/stability protein PilW strong 37 94
o Dechlorosoma suillum PS Dsui_3144 type IV pilus biogenesis/stability protein PilW sig. 31 87
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11190 type IV pilus biogenesis/stability protein PilW insig. 31 86
o Methylophilus sp. DMC18 GFF1190 hypothetical protein insig. 35 86
o Rhodanobacter sp. FW510-T8 OKGIIK_07135 pilW type IV pilus biogenesis/stability protein PilW sig. 31 84
o Rhodanobacter denitrificans MT42 LRK55_RS18070 type IV pilus biogenesis/stability protein PilW cofit 32 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00075 type IV pilus biogenesis/stability protein PilW sig. 32 86
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05450 type IV pilus biogenesis/stability protein PilW insig. 30 81
o Serratia liquefaciens MT49 IAI46_19285 type IV pilus biogenesis/stability protein PilW insig. 30 89
o Pseudomonas stutzeri RCH2 Psest_1260 type IV pilus biogenesis/stability protein PilW strong 31 80
o Rahnella sp. WP5 EX31_RS20520 type IV pilus biogenesis/stability protein PilW insig. 28 88
o Shewanella loihica PV-4 Shew_1288 type IV pilus biogenesis/stability protein PilW (RefSeq) strong 27 87
  Pseudomonas simiae WCS417 PS417_23155 pilus assembly protein PilW strong 30 75
o Pseudomonas syringae pv. syringae B728a Psyr_1246 TPR repeat protein:TPR repeat protein insig. 28 82
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1246 TPR repeat protein:TPR repeat protein insig. 28 82
o Pseudomonas sp. S08-1 OH686_17520 type IV pilus biogenesis/stability protein PilW cofit 27 88
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2736.1 Type IV pilus biogenesis protein PilF insig. 27 86
  Lysobacter sp. OAE881 ABIE51_RS09420 type IV pilus biogenesis/stability protein PilW cofit 32 60
o Vibrio cholerae E7946 ATCC 55056 CSW01_08105 type IV pilus biogenesis/stability protein PilW insig. 27 85
o Shewanella sp. ANA-3 Shewana3_1227 type IV pilus biogenesis/stability protein PilW (RefSeq) no data 27 74
  Pseudomonas sp. DMC3 GFF4341 hypothetical protein cofit 29 72
o Pseudomonas fluorescens FW300-N2C3 AO356_06600 pilus assembly protein PilW sig. 27 88
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3180 Type IV pilus biogenesis protein PilF sig. 27 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_856 Type IV pilus biogenesis protein PilF insig. 28 72
o Kangiella aquimarina DSM 16071 B158DRAFT_1150 type IV pilus biogenesis/stability protein PilW strong 26 91
o Shewanella amazonensis SB2B Sama_2367 fimbrial biogenesis and twitching motility protein, putative (RefSeq) insig. 24 84
  Pseudomonas fluorescens SBW25 PFLU_RS24810 type IV pilus biogenesis/stability protein PilW insig. 31 75
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24810 type IV pilus biogenesis/stability protein PilW insig. 31 75
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4864 Type IV pilus biogenesis protein PilF insig. 29 72
  Pseudomonas putida KT2440 PP_0851 Type IV pili biogenesis protein PilF insig. 26 77
o Pectobacterium carotovorum WPP14 HER17_RS06090 type IV pilus biogenesis/stability protein PilW insig. 27 74
  Pseudomonas sp. RS175 PFR28_00295 hypothetical protein insig. 29 72
  Pseudomonas fluorescens FW300-N2E3 AO353_15880 pilus assembly protein PilW sig. 28 72
o Shewanella oneidensis MR-1 SO3314 fimbrial biogenesis and twitching motility protein, putative (NCBI ptt file) sig. 23 92
  Pseudomonas aeruginosa MRSN321 DY961_RS13895 pilF;inference=COORDINATES type 4a pilus biogenesis protein PilF strong 26 73
  Pseudomonas aeruginosa PA14 IKLFDK_19595 type 4a pilus biogenesis protein PilF strong 26 73
  Pseudomonas aeruginosa PUPa3 DQ20_RS43205 pilF;inference=COORDINATES type 4a pilus biogenesis protein PilF strong 26 73
o Pseudomonas segetis P6 ACVTMO_RS07510 pilW type IV pilus biogenesis/stability protein PilW cofit 27 77
o Dickeya dianthicola 67-19 HGI48_RS15585 type IV pilus biogenesis/stability protein PilW insig. 28 87
o Dickeya dianthicola ME23 DZA65_RS16660 type IV pilus biogenesis/stability protein PilW insig. 28 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04783 hypothetical protein insig. 30 75
o Acinetobacter radioresistens SK82 MPMX26_00427 Lipopolysaccharide assembly protein B cofit 27 82
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_02780 pilW type IV pilus biogenesis/stability protein PilW cofit 25 77
  Erwinia tracheiphila SCR3 LU632_RS17810 pilW type IV pilus biogenesis/stability protein PilW insig. 25 77
o Dickeya dadantii 3937 DDA3937_RS15475 type IV pilus biogenesis/stability protein PilW insig. 27 88
  Pseudomonas sp. BP01 JOY50_RS22775 pilW type IV pilus biogenesis/stability protein PilW insig. 27 73
o Marinobacter adhaerens HP15 HP15_1491 type IV pilus biogenesis protein PilF no data 28 77
  Alteromonas macleodii MIT1002 MIT1002_02790 photosystem I assembly protein Ycf3 insig. 23 90
  Pseudomonas orientalis W4I3 QF045_RS25375 type IV pilus biogenesis/stability protein PilW cofit 28 75
o Erwinia amylovora T8 OLJFJH_10440 type IV pilus biogenesis/stability protein PilW insig. 22 76
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14935 type IV pilus biogenesis/stability protein PilW cofit 26 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS35255 tetratricopeptide repeat protein insig. 33 57
  Sinorhizobium meliloti 1021 SMc03935 hypothetical protein strong 32 50
o Acinetobacter baumannii LAC-4 RR41_RS16455 type IV pilus biogenesis/stability protein PilW sig. 24 83
  Pseudomonas sp. SVBP6 COO64_RS03940 pilW type IV pilus biogenesis/stability protein PilW insig. 29 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04912 Glycosyltransferase family 9 (heptosyltransferase) insig. 34 38
  Methanococcus maripaludis S2 MMP_RS01490 tetratricopeptide repeat protein insig. 23 51
  Azospirillum brasilense Sp245 AZOBR_RS21625 hypothetical protein strong 28 72
  Pantoea sp. MT58 IAI47_05045 type IV pilus biogenesis/stability protein PilW sig. 25 83
  Agrobacterium fabrum C58 Atu0633 hypothetical protein no data 27 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS03405 tetratricopeptide repeat-containing glycosyltransferase family protein insig. 33 48
  Methanococcus maripaludis JJ MMJJ_RS00535 tetratricopeptide repeat protein insig. 20 42
  Burkholderia phytofirmans PsJN BPHYT_RS18650 hypothetical protein insig. 27 53
  Methanococcus maripaludis JJ MMJJ_RS03885 tetratricopeptide repeat protein insig. 24 58
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00220 tetratricopeptide repeat protein strong 25 50
  Magnetospirillum magneticum AMB-1 AMB_RS11910 tetratricopeptide repeat protein insig. 30 48
  Phaeobacter inhibens DSM 17395 PGA1_c03330 tetratricopeptide repeat-containing protein strong 28 43
  Rhizobium sp. OAE497 ABIE40_RS16570 tetratricopeptide repeat protein sig. 28 53
  Bacteroides ovatus ATCC 8483 BACOVA_01775 tetratricopeptide repeat domain protein strong 23 53
  Methanococcus maripaludis S2 MMP_RS04600 tetratricopeptide repeat protein insig. 20 42
  Erwinia amylovora T8 OLJFJH_07270 lipoprotein NlpI strong 29 35
  Magnetospirillum magneticum AMB-1 AMB_RS13135 tetratricopeptide repeat protein insig. 31 39
  Rhodopseudomonas palustris CGA009 TX73_005335 tetratricopeptide repeat protein insig. 28 46
  Herbaspirillum seropedicae SmR1 HSERO_RS08710 methyltransferase insig. 35 29
  Serratia liquefaciens MT49 IAI46_01960 lipoprotein NlpI strong 29 35
  Klebsiella pneumoniae MKP103 KDGMDA_05870 lipoprotein NlpI strong 26 45
  Synechococcus elongatus PCC 7942 Synpcc7942_0208 TPR repeat sig. 24 68
  Rahnella sp. WP5 EX31_RS08515 lipoprotein NlpI sig. 29 35
  Paraburkholderia sabiae LMG 24235 QEN71_RS37180 tetratricopeptide repeat protein insig. 33 41
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09095 lipoprotein NlpI cofit 28 35
  Desulfovibrio vulgaris Miyazaki F DvMF_2851 diguanylate cyclase and serine/threonine protein kinase with TPR repeats (RefSeq) strong 28 53
  Dinoroseobacter shibae DFL-12 Dshi_3074 Tetratricopeptide TPR_2 repeat protein (RefSeq) no data 27 44
  Enterobacter asburiae PDN3 EX28DRAFT_3212 Lipoprotein NlpI, contains TPR repeats sig. 25 52
  Synechococcus elongatus PCC 7942 Synpcc7942_0531 TPR repeat no data 28 53
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13965 nlpI lipoprotein NlpI no data 28 35
  Erwinia tracheiphila SCR3 LU632_RS21035 nlpI lipoprotein NlpI no data 28 35
  Enterobacter sp. TBS_079 MPMX20_04067 Lipoprotein NlpI strong 25 52
  Burkholderia phytofirmans PsJN BPHYT_RS07055 sulfotransferase insig. 30 38
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1097 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) cofit 30 38
  Dechlorosoma suillum PS Dsui_1785 Tfp pilus assembly protein PilF cofit 28 53
  Pantoea sp. MT58 IAI47_17000 lipoprotein NlpI strong 27 35