| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_18590 | | SAM-dependent methyltransferase | sig. | 100 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS20730 | | class I SAM-dependent methyltransferase | cofit | 94 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03946 | | putative methyltransferase YcgJ | cofit | 93 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS20570 | | class I SAM-dependent methyltransferase | insig. | 92 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20570 | | class I SAM-dependent methyltransferase | strong | 92 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3946 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 85 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_13 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 85 | 100 |
| o | Pseudomonas sp. DMC3 | GFF787 | | putative methyltransferase YcgJ | cofit | 85 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_02822 | | putative methyltransferase YcgJ | insig. | 83 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_65 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 84 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS05655 | | class I SAM-dependent methyltransferase | insig. | 83 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_21410 | | SAM-dependent methyltransferase | cofit | 82 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_20630 | | SAM-dependent methyltransferase | cofit | 83 | 100 |
| o | Pseudomonas putida KT2440 | PP_1987 | | Methlytransferase, UbiE/COQ5 family | insig. | 82 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS16620 | | class I SAM-dependent methyltransferase | insig. | 82 | 100 |
| o | Pseudomonas segetis P6 | ACVTMO_RS15220 | | class I SAM-dependent methyltransferase | insig. | 70 | 98 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS01330 | | class I SAM-dependent methyltransferase | sig. | 71 | 98 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS34225 | | class I SAM-dependent methyltransferase | sig. | 71 | 98 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_15870 | | SAM-dependent methyltransferase | sig. | 71 | 98 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1052.1 | | hypothetical protein | insig. | 67 | 98 |
| o | Dickeya dadantii 3937 | DDA3937_RS10700 | | class I SAM-dependent methyltransferase | insig. | 59 | 100 |
| o | Rahnella sp. WP5 | EX31_RS21940 | | class I SAM-dependent methyltransferase | insig. | 57 | 100 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_13680 | | SAM-dependent methyltransferase | insig. | 57 | 100 |
| o | Serratia liquefaciens MT49 | IAI46_04605 | | class I SAM-dependent methyltransferase | insig. | 59 | 100 |
| o | Klebsiella michiganensis M5al | BWI76_RS05430 | | UbiE/COQ5 family methyltransferase | sig. | 56 | 100 |
| o | Enterobacter sp. TBS_079 | MPMX20_00895 | | putative methyltransferase YcgJ | insig. | 56 | 100 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS04660 | | SAM-dependent methyltransferase | insig. | 57 | 98 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_2684 | | Methyltransferase domain | insig. | 56 | 100 |
| o | Escherichia coli ECRC100 | OKFHMN_09990 | ubiE | SAM-dependent methyltransferase | insig. | 56 | 100 |
| o | Escherichia coli ECRC101 | MCAODC_00505 | ubiE | SAM-dependent methyltransferase | insig. | 56 | 100 |
| o | Escherichia coli ECRC102 | NIAGMN_07840 | ubiE | SAM-dependent methyltransferase | insig. | 56 | 100 |
| o | Escherichia coli ECRC98 | JDDGAC_13585 | ubiE | SAM-dependent methyltransferase | insig. | 56 | 100 |
| o | Escherichia coli ECRC99 | KEDOAH_18165 | ubiE | SAM-dependent methyltransferase | no data | 56 | 100 |
| o | Escherichia coli ECOR27 | NOLOHH_02335 | ubiE | SAM-dependent methyltransferase | insig. | 55 | 100 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03451 | | putative methyltransferase YcgJ | insig. | 55 | 100 |
| o | Escherichia coli ECOR38 | HEPCGN_07930 | ubiE | SAM-dependent methyltransferase | insig. | 55 | 100 |
| o | Escherichia coli ECRC62 | BNILDI_09335 | ubiE | SAM-dependent methyltransferase | insig. | 55 | 100 |
| o | Escherichia fergusonii Becca | EFB2_03833 | | putative methyltransferase YcgJ | insig. | 54 | 100 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4042 | | SAM-dependent methyltransferase YafE (UbiE paralog) | insig. | 55 | 100 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS01150 | | class I SAM-dependent methyltransferase | insig. | 53 | 100 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS21750 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 53 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_01135 | | putative methyltransferase YcgJ | insig. | 51 | 99 |
| o | Xanthobacter sp. DMC5 | GFF2247 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 56 | 96 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS01600 | | class I SAM-dependent methyltransferase | cofit | 51 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS24960 | | class I SAM-dependent methyltransferase | insig. | 53 | 96 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS05220 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 50 | 98 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00196 | | Ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 51 | 97 |
| o | Paraburkholderia graminis OAS925 | ABIE53_001313 | | SAM-dependent methyltransferase | sig. | 49 | 97 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS03430 | | SAM-dependent methyltransferase | insig. | 52 | 97 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS08170 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 52 | 96 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS17180 | | class I SAM-dependent methyltransferase | sig. | 50 | 96 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS12620 | | class I SAM-dependent methyltransferase | insig. | 44 | 93 |
| | Escherichia coli BL21 | ECD_00203 | | putative S-adenosyl-L-methionine-dependent methyltransferase | sig. | 55 | 80 |
| | Escherichia coli BW25113 | b0210 | yafE | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | insig. | 55 | 80 |
| | Erwinia amylovora T8 | OLJFJH_18650 | | Uncharacterized protein yafE | insig. | 44 | 35 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05655 | | malonyl-[acyl-carrier protein] O-methyltransferase BioC | insig. | 37 | 57 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_00445 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 32 | 60 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1099 | ubiE | ubiquinone/menaquinone biosynthesis methyltransferase | strong | 38 | 46 |
| | Pseudomonas sp. S08-1 | OH686_10145 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 37 | 54 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 31 | 79 |
| | Marinobacter adhaerens HP15 | HP15_3191 | | ubiquinone/menaquinone biosynthesis methyltransferase UbiE | no data | 35 | 54 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22920 | | malonyl-ACP O-methyltransferase BioC | strong | 35 | 63 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_07510 | | malonyl-[acyl-carrier protein] O-methyltransferase BioC | strong | 37 | 59 |
| | Azospirillum sp. SherDot2 | MPMX19_03671 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 36 | 48 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0664 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 29 | 69 |
| | Xanthobacter sp. DMC5 | GFF4453 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 43 | 43 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2214 | | malonyl-acyl carrier protein O-methyltransferase BioC | insig. | 37 | 54 |
| | Shewanella sp. ANA-3 | Shewana3_3725 | | demethylmenaquinone methyltransferase (RefSeq) | no data | 35 | 43 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_19575 | bioC | malonyl-ACP O-methyltransferase BioC | no data | 37 | 58 |
| | Erwinia tracheiphila SCR3 | LU632_RS09140 | bioC | malonyl-ACP O-methyltransferase BioC | no data | 37 | 58 |
| | Shewanella amazonensis SB2B | Sama_3202 | | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (RefSeq) | no data | 37 | 41 |
| | Shewanella oneidensis MR-1 | SO4199 | ubiE | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (NCBI ptt file) | no data | 36 | 41 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS22520 | bioC;go_function=malonyl-CoA | malonyl-ACP O-methyltransferase BioC | no data | 34 | 63 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36810 | bioC;go_function=malonyl-CoA | malonyl-ACP O-methyltransferase BioC | insig. | 34 | 63 |
| | Escherichia coli ECOR38 | HEPCGN_01650 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 33 | 61 |
| | Escherichia coli ECRC62 | BNILDI_21030 | bioC | malonyl-ACP O-methyltransferase BioC | cofit | 33 | 61 |
| | Pseudomonas orientalis W4I3 | QF045_RS00400 | | malonyl-ACP O-methyltransferase BioC | insig. | 33 | 67 |
| | Escherichia coli ECOR27 | NOLOHH_22760 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 36 | 51 |
| | Marinobacter adhaerens HP15 | HP15_2483 | | protein containing methyltransferase type 11 domain | insig. | 39 | 37 |
| | Pectobacterium carotovorum WPP14 | HER17_RS13450 | | malonyl-ACP O-methyltransferase BioC | cofit | 34 | 60 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15820 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 31 | 44 |
| | Escherichia coli ECRC100 | OKFHMN_06390 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 32 | 61 |
| | Escherichia coli ECRC101 | MCAODC_25605 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 32 | 61 |
| | Escherichia coli ECRC102 | NIAGMN_04435 | bioC | malonyl-ACP O-methyltransferase BioC | strong | 32 | 61 |
| | Escherichia coli ECRC98 | JDDGAC_10025 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 32 | 61 |
| | Escherichia coli ECRC99 | KEDOAH_21520 | bioC | malonyl-ACP O-methyltransferase BioC | no data | 32 | 61 |
| | Agrobacterium fabrum C58 | Atu2124 | | transcriptional regulator, ArsR family | sig. | 31 | 64 |
| | Erwinia amylovora T8 | OLJFJH_16750 | | malonyl-ACP O-methyltransferase BioC | insig. | 40 | 42 |
| | Serratia liquefaciens MT49 | IAI46_01065 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 35 | 44 |
| | Pseudomonas sp. BP01 | JOY50_RS09635 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 34 | 53 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11145 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 33 | 53 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28210 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 33 | 53 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50940 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 33 | 53 |
| | Escherichia fergusonii Becca | EFB2_03328 | | Malonyl-[acyl-carrier protein] O-methyltransferase | insig. | 36 | 51 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS04140 | | malonyl-ACP O-methyltransferase BioC | insig. | 36 | 51 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS03195 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 34 | 44 |
| | Dickeya dadantii 3937 | DDA3937_RS08520 | | malonyl-ACP O-methyltransferase BioC | insig. | 30 | 66 |
| | Dechlorosoma suillum PS | Dsui_2055 | | methylase involved in ubiquinone/menaquinone biosynthesis | no data | 41 | 43 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_08650 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 36 | 44 |
| | Erwinia tracheiphila SCR3 | LU632_RS24005 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 36 | 44 |