Homologs of GFF3438 from Hydrogenophaga sp. GW460-11-11-14-LB1

Poly(A) polymerase (EC 2.7.7.19)
SEED: Poly(A) polymerase (EC 2.7.7.19)
KEGG: poly(A) polymerase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3438 Poly(A) polymerase (EC 2.7.7.19) strong 100 100
o Variovorax sp. SCN45 GFF3943 Poly(A) polymerase (EC 2.7.7.19) cofit 73 88
o Variovorax sp. OAS795 ABID97_RS08710 polynucleotide adenylyltransferase PcnB strong 72 88
o Acidovorax sp. GW101-3H11 Ac3H11_1313 Poly(A) polymerase (EC 2.7.7.19) no data 72 87
o Cupriavidus basilensis FW507-4G11 RR42_RS17235 poly(A) polymerase strong 54 84
o Ralstonia solanacearum PSI07 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB strong 48 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS00935 polynucleotide adenylyltransferase PcnB strong 49 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05300 polynucleotide adenylyltransferase PcnB strong 48 90
o Ralstonia solanacearum GMI1000 RS_RS13165 polynucleotide adenylyltransferase PcnB strong 51 83
o Burkholderia phytofirmans PsJN BPHYT_RS03620 poly(A) polymerase cofit 48 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS26465 polynucleotide adenylyltransferase PcnB insig. 52 78
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04706 poly(A) polymerase strong 52 78
  Paraburkholderia graminis OAS925 ABIE53_000870 poly(A) polymerase strong 52 78
o Herbaspirillum seropedicae SmR1 HSERO_RS03145 poly(A) polymerase sig. 51 77
o Castellaniella sp019104865 MT123 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB cofit 44 89
o Methylophilus sp. DMC18 GFF2604 Poly(A) polymerase I insig. 44 83
o Dechlorosoma suillum PS Dsui_1515 poly(A) polymerase strong 46 83
o Pseudomonas putida KT2440 PP_4697 poly(A) polymerase strong 41 87
o Pseudomonas sp. BP01 JOY50_RS27670 polynucleotide adenylyltransferase PcnB sig. 42 86
o Marinobacter adhaerens HP15 HP15_326 polyA polymerase strong 42 78
o Pseudomonas syringae pv. syringae B728a Psyr_0830 Poly(A) polymerase strong 39 85
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0830 Poly(A) polymerase sig. 39 85
o Pseudomonas sp. S08-1 OH686_17255 Poly(A) polymerase strong 42 83
o Pseudomonas simiae WCS417 PS417_23900 poly(A) polymerase strong 39 88
  Shewanella oneidensis MR-1 SO0872 pcnB polyA polymerase (NCBI ptt file) strong 42 77
o Pseudomonas sp. SVBP6 COO64_RS15095 polynucleotide adenylyltransferase PcnB sig. 39 88
o Pseudomonas fluorescens SBW25 PFLU_RS25740 polynucleotide adenylyltransferase PcnB strong 40 83
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25740 polynucleotide adenylyltransferase PcnB strong 40 83
o Pseudomonas sp. RS175 PFR28_03719 Poly(A) polymerase I strong 38 88
o Pseudomonas sp. DMC3 GFF4029 Poly(A) polymerase I cofit 38 89
o Pseudomonas stutzeri RCH2 Psest_0998 poly(A) polymerase strong 41 82
  Shewanella sp. ANA-3 Shewana3_3406 poly(A) polymerase (RefSeq) strong 41 77
o Pseudomonas fluorescens FW300-N2E3 AO353_14395 poly(A) polymerase strong 38 85
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) strong 38 87
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) strong 38 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) strong 37 88
o Alteromonas macleodii MIT1002 MIT1002_03692 Poly(A) polymerase I precursor strong 42 79
o Pseudomonas aeruginosa PA14 IKLFDK_29965 polynucleotide adenylyltransferase PcnB cofit 41 83
o Pseudomonas fluorescens FW300-N2C3 AO356_16070 poly(A) polymerase strong 37 88
  Rhodanobacter denitrificans MT42 LRK55_RS14820 polynucleotide adenylyltransferase PcnB strong 44 75
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15105 polynucleotide adenylyltransferase PcnB strong 44 75
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13510 polynucleotide adenylyltransferase PcnB cofit 44 75
  Rhodanobacter sp. FW510-T8 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase strong 43 77
o Kangiella aquimarina DSM 16071 B158DRAFT_0058 poly(A) polymerase sig. 39 83
o Dickeya dianthicola ME23 DZA65_RS17145 polynucleotide adenylyltransferase PcnB sig. 38 83
o Shewanella loihica PV-4 Shew_3131 poly(A) polymerase (RefSeq) strong 38 82
o Dickeya dadantii 3937 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB sig. 38 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB sig. 44 75
o Vibrio cholerae E7946 ATCC 55056 CSW01_03145 polynucleotide adenylyltransferase PcnB insig. 38 83
o Dickeya dianthicola 67-19 HGI48_RS16060 polynucleotide adenylyltransferase PcnB cofit 38 83
  Shewanella amazonensis SB2B Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) strong 40 74
  Pectobacterium carotovorum WPP14 HER17_RS05570 polynucleotide adenylyltransferase PcnB cofit 38 78
  Serratia liquefaciens MT49 IAI46_21220 polynucleotide adenylyltransferase PcnB cofit 38 78
  Enterobacter asburiae PDN3 EX28DRAFT_3732 poly(A) polymerase insig. 38 78
  Enterobacter sp. TBS_079 MPMX20_00829 Poly(A) polymerase I strong 39 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF89 Poly(A) polymerase (EC 2.7.7.19) sig. 38 78
o Lysobacter sp. OAE881 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB cofit 43 75
  Rahnella sp. WP5 EX31_RS03260 polynucleotide adenylyltransferase PcnB cofit 38 78
  Klebsiella michiganensis M5al BWI76_RS05005 polynucleotide adenylyltransferase strong 38 78
  Erwinia amylovora T8 OLJFJH_00775 polynucleotide adenylyltransferase PcnB strong 38 78
o Pantoea sp. MT58 IAI47_15645 polynucleotide adenylyltransferase PcnB strong 38 78
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) insig. 42 74
  Escherichia coli BL21 ECD_00142 poly(A) polymerase strong 37 78
  Escherichia fergusonii Becca EFB2_03901 Poly(A) polymerase I cofit 37 78
  Escherichia coli ECOR38 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB strong 37 78
  Escherichia coli ECRC100 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB strong 37 78
  Escherichia coli ECRC101 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB strong 37 78
  Escherichia coli ECRC102 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB insig. 37 78
  Escherichia coli ECRC98 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB strong 37 78
  Escherichia coli ECRC99 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB no data 37 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03519 Poly(A) polymerase I sig. 37 78
  Escherichia coli Nissle 1917 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB cofit 37 78
  Escherichia coli BW25113 b0143 pcnB poly(A) polymerase I (VIMSS) strong 37 78
  Escherichia coli ECOR27 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB cofit 37 78
  Escherichia coli ECRC62 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB strong 37 78
  Erwinia tracheiphila SCR3 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB strong 38 76
o Acinetobacter radioresistens SK82 MPMX26_00543 Poly(A) polymerase I strong 36 82
  Fusobacterium nucleatum SB010 HUW76_08405 CCA tRNA nucleotidyltransferase strong 29 46
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1520 Poly A polymerase head domain/Probable RNA and SrmB- binding site of polymerase A no data 37 39
  Phaeobacter inhibens DSM 17395 PGA1_c34840 putative tRNA-nucleotidyltransferase no data 33 45
  Bifidobacterium breve UCC2003 BBR_RS20435 CCA tRNA nucleotidyltransferase strong 30 46
  Dinoroseobacter shibae DFL-12 Dshi_3489 Polynucleotide adenylyltransferase region (RefSeq) no data 33 41
  Rhizobium sp. OAE497 ABIE40_RS13240 CCA tRNA nucleotidyltransferase no data 31 46
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.960.1 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 33 45
  Shewanella sp. ANA-3 Shewana3_3076 metal dependent phosphohydrolase (RefSeq) no data 32 44
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00570 HD domain-containing protein no data 30 46
  Phocaeicola dorei CL03T12C01 ABI39_RS08190 HD domain-containing protein no data 29 46
  Xanthobacter sp. DMC5 GFF56 CCA-adding enzyme no data 33 46
  Lysobacter sp. OAE881 ABIE51_RS19085 multifunctional CCA addition/repair protein no data 33 45
  Bosea sp. OAE506 ABIE41_RS11165 CCA tRNA nucleotidyltransferase no data 32 46
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1193 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 33 44
  Rhodospirillum rubrum S1H Rru_A0366 Polynucleotide adenylyltransferase region (NCBI) no data 30 54
  Bacteroides stercoris CC31F HMPREF1181_RS08045 HD domain-containing protein no data 29 46
  Acinetobacter radioresistens SK82 MPMX26_00999 Multifunctional CCA protein no data 31 44
  Pectobacterium carotovorum WPP14 HER17_RS04020 multifunctional CCA addition/repair protein no data 32 44
  Herbaspirillum seropedicae SmR1 HSERO_RS21400 tRNA nucleotidyl transferase no data 33 44
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2520 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 31 44
  Enterobacter sp. TBS_079 MPMX20_03893 Multifunctional CCA protein no data 30 44
  Bacteroides thetaiotaomicron VPI-5482 BT1975 tRNA nucleotidyltransferase (NCBI ptt file) no data 29 46
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01130 multifunctional CCA addition/repair protein no data 31 53