| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas stutzeri RCH2 | Psest_2710 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | no data | 100 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_22730 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 82 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS07795 | | SpoIIE family protein phosphatase | no data | 80 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07795 | | SpoIIE family protein phosphatase | no data | 80 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 80 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 80 | 100 |
| o | Pseudomonas sp. DMC3 | GFF1302 | | Regulator of RpoS | no data | 80 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01676 | | Regulator of RpoS | no data | 80 | 100 |
| o | Pseudomonas protegens RBAN4 | FABNJH_10325 | rpoS | Regulator of RpoS | strong | 80 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_07720 | | chemotaxis protein CheY | no data | 80 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS10365 | | SpoIIE family protein phosphatase | no data | 80 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4011 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 80 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_02185 | | chemotaxis protein CheY | no data | 80 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2260 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 80 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_01140 | | Regulator of RpoS | no data | 80 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS09545 | rssB | two-component system response regulator RssB | no data | 80 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_60 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 80 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_00320 | | chemotaxis protein CheY | no data | 79 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS03060 | | SpoIIE family protein phosphatase | no data | 79 | 100 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS32530 | rssB;go_process=phosphorelay | two-component system response regulator RssB | no data | 79 | 100 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_14160 | | fused response regulator/phosphatase | no data | 79 | 100 |
| o | Pseudomonas putida KT2440 | PP_2165 | | Response regulator | no data | 79 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS25185 | rssB | two-component system response regulator RssB | no data | 79 | 100 |
| o | Pseudomonas segetis P6 | ACVTMO_RS09490 | rssB | two-component system response regulator RssB | no data | 77 | 100 |
| | Marinobacter adhaerens HP15 | HP15_1764 | | two-component response regulator | strong | 45 | 76 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_3074 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | cofit | 57 | 35 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0408 | | response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) | sig. | 50 | 40 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1544 | | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) | insig. | 54 | 35 |
| | Shewanella sp. ANA-3 | Shewana3_1372 | | response regulator receiver protein (RefSeq) | strong | 31 | 68 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0064 | | histidine kinase (RefSeq) | sig. | 50 | 35 |
| | Shewanella oneidensis MR-1 | SO3196 | | response regulator (NCBI ptt file) | strong | 31 | 65 |
| | Azospirillum sp. SherDot2 | MPMX19_01958 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 32 | 85 |
| | Azospirillum brasilense Sp245 | AZOBR_RS14285 | | transcriptional regulator | strong | 30 | 98 |
| | Shewanella loihica PV-4 | Shew_1396 | | response regulator receiver protein (RefSeq) | insig. | 28 | 87 |
| | Shewanella amazonensis SB2B | Sama_2267 | | response regulator receiver protein (RefSeq) | strong | 28 | 87 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1181 | | response regulator (TIGR) | cofit | 38 | 55 |
| | Azospirillum brasilense Sp245 | AZOBR_RS14305 | | transcriptional regulator | cofit | 27 | 91 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c34880 | | putative response regulator | strong | 29 | 87 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1146 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 28 | 98 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS13255 | | SpoIIE family protein phosphatase | insig. | 30 | 74 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0888 | | response regulator (TIGR) | sig. | 43 | 39 |
| | Shewanella sp. ANA-3 | Shewana3_2013 | | response regulator receiver modulated serine phosphatase (RefSeq) | cofit | 27 | 85 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS05675 | | Serine phosphatase RsbU regulator sigma subunit | insig. | 30 | 87 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1461 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 46 | 35 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05345 | | two-component system response regulator | insig. | 29 | 68 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVUA0086 | | response regulator (TIGR) | sig. | 41 | 35 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3485 | | response regulator receiver modulated serine phosphatase (RefSeq) | sig. | 26 | 97 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS10415 | | SpoIIE family protein phosphatase | insig. | 24 | 85 |
| | Azospirillum brasilense Sp245 | AZOBR_RS12605 | | regulator | insig. | 29 | 84 |
| | Azospirillum sp. SherDot2 | MPMX19_00501 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 26 | 90 |
| | Pseudomonas segetis P6 | ACVTMO_RS01055 | | sigma-54-dependent transcriptional regulator | insig. | 41 | 36 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1419 | | signal transduction histidine kinase (RefSeq) | cofit | 41 | 34 |
| | Azospirillum sp. SherDot2 | MPMX19_01957 | | Sensor histidine kinase RcsC | insig. | 29 | 85 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0482 | | sensory box histidine kinase/response regulator (TIGR) | insig. | 40 | 33 |
| | Methylophilus sp. DMC18 | GFF2815 | | Regulatory protein AtoC | insig. | 39 | 35 |
| | Rahnella sp. WP5 | EX31_RS10100 | | two-component system response regulator RssB | insig. | 28 | 81 |
| | Pseudomonas sp. S08-1 | OH686_14355 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 44 | 34 |
| | Pseudomonas stutzeri RCH2 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | strong | 40 | 35 |
| | Xanthobacter sp. DMC5 | GFF3675 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 42 | 35 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0258 | | sensory box histidine kinase/response regulator (TIGR) | strong | 39 | 34 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS13380 | | fused response regulator/phosphatase | insig. | 28 | 85 |
| | Shewanella oneidensis MR-1 | SO3138 | dctD | C4-dicarboxylate transport transcriptional regulatory protein (NCBI ptt file) | insig. | 41 | 35 |
| | Pseudomonas protegens RBAN4 | FABNJH_01565 | dctD | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 43 | 34 |
| | Acinetobacter radioresistens SK82 | MPMX26_00582 | | hypothetical protein | no data | 26 | 86 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_685 | | Nitrogen regulation protein NR(I) | no data | 40 | 33 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS18385 | | transcriptional regulator | insig. | 28 | 77 |
| | Serratia liquefaciens MT49 | IAI46_14250 | | two-component system response regulator RssB | cofit | 27 | 79 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25855 | | DNA-binding response regulator | sig. | 41 | 34 |
| | Pseudomonas sp. BP01 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | insig. | 38 | 42 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5487 | | Nitrogen regulation protein NR(I) | strong | 38 | 42 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2550 | | multi-sensor signal transduction histidine kinase (RefSeq) | insig. | 37 | 37 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 40 | 35 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17900 | | serine phosphatase | insig. | 27 | 74 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03805 | | C4-dicarboxylate ABC transporter | strong | 39 | 36 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17800 | | C4-dicarboxylate ABC transporter | strong | 37 | 42 |
| | Shewanella sp. ANA-3 | Shewana3_1412 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | cofit | 39 | 35 |
| | Rhodospirillum rubrum S1H | Rru_A1385 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | cofit | 38 | 35 |
| | Pectobacterium carotovorum WPP14 | HER17_RS11050 | | two-component system response regulator RssB | cofit | 40 | 29 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11680 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 45 | 32 |
| | Pseudomonas sp. BP01 | JOY50_RS26420 | | sigma-54 dependent transcriptional regulator | insig. | 39 | 34 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27655 | | two-component system response regulator DctD | strong | 45 | 32 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50420 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 45 | 32 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3381 | ntrC | transcriptional regulatory protein zraR (TIGR) | strong | 40 | 35 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_04380 | | response regulator | strong | 38 | 33 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25855 | | sigma-54 dependent transcriptional regulator | strong | 41 | 34 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58285 | | sigma-54 dependent transcriptional regulator | strong | 41 | 34 |
| | Pseudomonas putida KT2440 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 38 | 42 |
| | Escherichia fergusonii Becca | EFB2_02691 | | Regulator of RpoS | sig. | 33 | 53 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS07475 | | two-component system response regulator RssB | no data | 33 | 53 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1666 | | C4-dicarboxylate transport transcriptional regulatory protein | sig. | 41 | 34 |
| | Sphingobium sp. HT1-2 | GFF1146 | | NtrX | no data | 41 | 33 |
| | Pseudomonas simiae WCS417 | PS417_22645 | | C4-dicarboxylate ABC transporter | sig. | 39 | 33 |
| | Escherichia coli BL21 | ECD_01211 | | PcnB-degradosome interaction factor; response regulator | insig. | 33 | 53 |
| | Escherichia coli ECOR38 | HEPCGN_25045 | rssB | two-component system response regulator RssB | strong | 33 | 53 |
| | Escherichia coli ECRC100 | OKFHMN_28585 | rssB | two-component system response regulator RssB | cofit | 33 | 53 |
| | Escherichia coli ECRC101 | MCAODC_21675 | rssB | two-component system response regulator RssB | strong | 33 | 53 |
| | Escherichia coli ECRC102 | NIAGMN_27650 | rssB | two-component system response regulator RssB | no data | 33 | 53 |
| | Escherichia coli ECRC62 | BNILDI_18620 | rssB | two-component system response regulator RssB | strong | 33 | 53 |
| | Escherichia coli ECRC98 | JDDGAC_05990 | rssB | two-component system response regulator RssB | sig. | 33 | 53 |
| | Escherichia coli ECRC99 | KEDOAH_25580 | rssB | two-component system response regulator RssB | no data | 33 | 53 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02450 | | Regulator of RpoS | strong | 33 | 53 |
| | Escherichia coli BW25113 | b1235 | rssB | response regulator of RpoS (NCBI) | strong | 33 | 53 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 39 | 33 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 33 |
| | Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | insig. | 39 | 34 |
| | Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 39 | 34 |
| | Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | insig. | 39 | 34 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 39 | 34 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 39 | 34 |
| | Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 39 | 34 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04682 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 37 | 42 |
| | Pseudomonas orientalis W4I3 | QF045_RS24815 | | sigma-54 dependent transcriptional regulator | insig. | 36 | 42 |
| | Escherichia coli ECOR27 | NOLOHH_20465 | rssB | two-component system response regulator RssB | sig. | 33 | 53 |
| | Azospirillum brasilense Sp245 | AZOBR_RS22615 | | chemotaxis protein CheY | no data | 41 | 34 |
| | Pseudomonas sp. SVBP6 | COO64_RS26185 | | sigma-54 dependent transcriptional regulator | insig. | 38 | 36 |
| | Cellulophaga baltica 18 | M666_RS19210 | | sigma-54 dependent transcriptional regulator | insig. | 37 | 33 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2109 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 42 | 34 |
| | Pseudomonas sp. DMC3 | GFF5041 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 39 | 33 |
| | Pseudomonas putida KT2440 | PP_0263 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 39 | 34 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 37 | 42 |
| | Dickeya dianthicola 67-19 | HGI48_RS10350 | | two-component system response regulator RssB | cofit | 28 | 84 |
| | Dickeya dianthicola ME23 | DZA65_RS10825 | | two-component system response regulator RssB | sig. | 28 | 84 |
| | Pseudomonas stutzeri RCH2 | Psest_4267 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 41 | 32 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_24505 | | two-component system response regulator RssB | strong | 30 | 55 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1419 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 40 | 34 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1806 | | Nitrogen regulation protein NR(I) | strong | 39 | 33 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS15880 | rssB;go_process=phosphorelay | two-component system response regulator RssB | no data | 30 | 55 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09195 | | Fis family transcriptional regulator | strong | 39 | 32 |
| | Pseudomonas protegens RBAN4 | FABNJH_24290 | dctD | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 35 | 42 |
| | Azospirillum sp. SherDot2 | MPMX19_05978 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 41 | 34 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2753 | | Hnr protein | strong | 30 | 53 |
| | Paraburkholderia graminis OAS925 | ABIE53_000648 | | two-component system C4-dicarboxylate transport response regulator DctD | insig. | 38 | 36 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21130 | | Fis family transcriptional regulator | insig. | 38 | 35 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 40 | 34 |
| | Azospirillum sp. SherDot2 | MPMX19_04251 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 37 | 34 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_22690 | rssB | two-component system response regulator RssB | strong | 27 | 70 |
| | Erwinia tracheiphila SCR3 | LU632_RS12925 | rssB | two-component system response regulator RssB | cofit | 27 | 70 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3995 | | Helix-turn-helix, Fis-type | sig. | 37 | 35 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3995 | | Helix-turn-helix, Fis-type | insig. | 37 | 35 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_11860 | | Fis family transcriptional regulator | strong | 39 | 34 |
| | Pseudomonas sp. SVBP6 | COO64_RS22765 | | response regulator | insig. | 47 | 29 |
| | Sinorhizobium meliloti 1021 | SM_b21200 | | two-component response regulator protein | insig. | 42 | 32 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 41 | 32 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 41 | 32 |
| | Pseudomonas sp. DMC3 | GFF4159 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 39 | 34 |
| | Xanthobacter sp. DMC5 | GFF2901 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 37 | 34 |
| | Xanthobacter sp. DMC5 | GFF3781 | | Transcriptional regulatory protein FixJ | insig. | 39 | 34 |
| | Pseudomonas orientalis W4I3 | QF045_RS04425 | | sigma-54 dependent transcriptional regulator | cofit | 41 | 32 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01375 | | sigma-54 dependent transcriptional regulator | strong | 38 | 35 |
| | Dechlorosoma suillum PS | Dsui_1715 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | cofit | 27 | 91 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00486 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 41 | 32 |
| | Pseudomonas sp. SVBP6 | COO64_RS00595 | | sigma-54 dependent transcriptional regulator | insig. | 39 | 32 |
| | Acinetobacter baumannii LAC-4 | RR41_RS15865 | | RsbU family protein phosphatase GigA | insig. | 24 | 87 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1993 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 41 | 32 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3883 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 40 | 32 |
| | Pseudomonas protegens RBAN4 | FABNJH_24715 | | Sigma-54-dependent Fis family transcriptional regulator | insig. | 37 | 34 |
| | Klebsiella michiganensis M5al | BWI76_RS17275 | | two-component system response regulator RssB | insig. | 29 | 55 |
| | Sphingobium sp. HT1-2 | GFF159 | | hypothetical protein | cofit | 40 | 35 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02037 | | two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family | cofit | 38 | 35 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS05235 | glrR | two-component system response regulator GlrR | cofit | 36 | 36 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_02930 | qseF | two-component system response regulator QseF/GlrR | cofit | 42 | 28 |
| | Erwinia tracheiphila SCR3 | LU632_RS17930 | glrR | two-component system response regulator GlrR | insig. | 42 | 28 |
| | Azospirillum sp. SherDot2 | MPMX19_00268 | | Transcriptional regulatory protein OmpR | insig. | 38 | 40 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0196 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 37 | 31 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4938 | | Helix-turn-helix, Fis-type | sig. | 42 | 32 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4938 | | Helix-turn-helix, Fis-type | insig. | 42 | 32 |
| | Shewanella amazonensis SB2B | Sama_2213 | | response regulator receiver protein (RefSeq) | strong | 37 | 34 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 37 | 34 |
| | Agrobacterium fabrum C58 | Atu3296 | | two component response regulator for C4-dicarboxylate transport | strong | 37 | 35 |
| | Pseudomonas simiae WCS417 | PS417_01305 | | Fis family transcriptional regulator | sig. | 41 | 32 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02520 | | Fis family transcriptional regulator | strong | 38 | 34 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS20000 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 31 | 42 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4462 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 26 | 98 |
| | Rhodospirillum rubrum S1H | Rru_A1435 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | strong | 43 | 31 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_10065 | | Fis family transcriptional regulator | strong | 40 | 32 |
| | Sinorhizobium meliloti 1021 | SM_b20613 | | C4-dicarboxylate transport transcriptional regulator | strong | 35 | 37 |
| | Pseudomonas orientalis W4I3 | QF045_RS08450 | | sigma-54 dependent transcriptional regulator | insig. | 35 | 40 |
| | Rhizobium sp. OAE497 | ABIE40_RS15425 | | sigma-54 dependent transcriptional regulator | strong | 39 | 32 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0271 | | response regulator (TIGR) | insig. | 43 | 35 |
| | Pantoea sp. MT58 | IAI47_04945 | | two-component system response regulator GlrR | sig. | 36 | 36 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2601 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 39 | 35 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS16810 | | Fis family transcriptional regulator | strong | 38 | 35 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06635 | | sigma-54 dependent transcriptional regulator | strong | 36 | 34 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09510 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 34 | 35 |
| | Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 40 | 30 |
| | Shewanella loihica PV-4 | Shew_1442 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 36 | 34 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1860 | ycf29 | two component transcriptional regulator, LuxR family | no data | 36 | 36 |
| | Erwinia amylovora T8 | OLJFJH_10330 | | two-component system response regulator QseF/GlrR | cofit | 35 | 36 |
| | Erwinia amylovora T8 | OLJFJH_13285 | | two-component system response regulator RssB | strong | 27 | 68 |
| | Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 42 | 28 |
| | Azospirillum sp. SherDot2 | MPMX19_04701 | | Transcriptional regulatory protein FixJ | insig. | 40 | 27 |
| | Pseudomonas sp. RS175 | PFR28_04889 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 39 | 32 |
| | Azospirillum brasilense Sp245 | AZOBR_RS04985 | | chemotaxis protein CheY | insig. | 37 | 31 |
| | Caulobacter crescentus NA1000 | CCNA_01817 | | nitrogen assimilation regulatory protein ntrX | strong | 39 | 34 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01817 | | nitrogen assimilation regulatory protein ntrX | strong | 39 | 34 |
| | Agrobacterium fabrum C58 | Atu0114 | | two component response regulator | insig. | 38 | 32 |
| | Pseudomonas stutzeri RCH2 | Psest_3911 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 37 | 33 |
| | Azospirillum sp. SherDot2 | MPMX19_04512 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 39 | 34 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30385 | | Fis family transcriptional regulator | insig. | 39 | 34 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1081 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 37 | 33 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2549 | | response regulator receiver sensor signal transduction histidine kinase (RefSeq) | insig. | 39 | 33 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS10015 | | sigma-54 dependent transcriptional regulator | sig. | 34 | 39 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0732 | | two-component system response regulator (NCBI ptt file) | no data | 34 | 27 |
| | Bifidobacterium breve UCC2003 | BBR_RS17455 | | DNA-binding response regulator | strong | 32 | 41 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS09160 | rssB | two-component system response regulator RssB | no data | 28 | 69 |
| | Dechlorosoma suillum PS | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 37 | 28 |
| | Caulobacter crescentus NA1000 | CCNA_00795 | | two-component response regulator FixJ | strong | 36 | 29 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00795 | | two-component response regulator FixJ | cofit | 36 | 29 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16305 | | sigma-54 dependent transcriptional regulator | insig. | 36 | 34 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01292 | | Regulatory protein AtoC | cofit | 35 | 40 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0714 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 31 | 38 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2934 | ntrX | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 38 | 32 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05479 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 32 | 35 |
| | Pantoea sp. MT58 | IAI47_09025 | | two-component system response regulator RssB | no data | 27 | 69 |
| | Pseudomonas sp. SVBP6 | COO64_RS21290 | | sigma-54 dependent transcriptional regulator | insig. | 39 | 29 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS24605 | | DNA-binding response regulator | no data | 39 | 37 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS08380 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 36 | 33 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS05625 | | response regulator | insig. | 35 | 30 |
| | Pseudomonas sp. DMC3 | GFF84 | | Regulatory protein AtoC | no data | 43 | 28 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3303 | lon | ATP-dependent protease La, truncation (TIGR) | cofit | 41 | 26 |
| | Shewanella sp. ANA-3 | Shewana3_1051 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 38 | 26 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0215 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 37 | 33 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30925 | | transcriptional regulator | no data | 35 | 40 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3801 | | rteB, two-component system response regulator (NCBI ptt file) | strong | 35 | 26 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS15030 | | response regulator transcription factor | insig. | 36 | 27 |
| | Dickeya dadantii 3937 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | cofit | 34 | 30 |
| | Dickeya dianthicola 67-19 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | strong | 34 | 30 |
| | Dickeya dianthicola ME23 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | strong | 34 | 30 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS06690 | | response regulator | sig. | 32 | 35 |
| | Shewanella loihica PV-4 | Shew_2803 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 38 | 27 |
| | Sinorhizobium meliloti 1021 | SMa1227 | | response regulator FixJ | cofit | 36 | 40 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c13440 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | no data | 35 | 33 |
| | Dickeya dianthicola ME23 | DZA65_RS16815 | | two-component system response regulator GlrR | insig. | 41 | 27 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 38 | 33 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02438 | | response regulator receiver domain protein | insig. | 33 | 27 |
| | Enterobacter sp. TBS_079 | MPMX20_02593 | | Regulator of RpoS | strong | 30 | 65 |
| | Pseudomonas putida KT2440 | PP_0271 | | DNA-binding response regulator | insig. | 45 | 27 |
| | Dickeya dianthicola 67-19 | HGI48_RS15735 | | two-component system response regulator GlrR | insig. | 41 | 27 |
| | Acinetobacter baumannii LAC-4 | RR41_RS03410 | | response regulator | insig. | 39 | 28 |
| | Shewanella oneidensis MR-1 | SO1228 | torR | torcad operon transcriptional regulatory protein TorR (NCBI ptt file) | insig. | 38 | 26 |
| | Rhizobium sp. OAE497 | ABIE40_RS23715 | | response regulator | insig. | 37 | 27 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS11960 | | sigma-54-dependent Fis family transcriptional regulator | no data | 36 | 32 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS04170 | | response regulator transcription factor | no data | 36 | 29 |
| | Ralstonia solanacearum GMI1000 | RS_RS01635 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 36 | 34 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 35 | 40 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 35 | 40 |
| | Marinobacter adhaerens HP15 | HP15_725 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 33 | 35 |
| | Escherichia fergusonii Becca | EFB2_04538 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 33 | 35 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23460 | | sigma-54 dependent transcriptional regulator | cofit | 33 | 35 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4663 | | two-component system sensor histidine kinase/response (NCBI ptt file) | strong | 32 | 35 |