| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Xanthobacter sp. DMC5 | GFF1801 | | HTH-type transcriptional regulator DmlR | insig. | 100 | 100 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS18640 | | LysR family transcriptional regulator | insig. | 52 | 96 |
| o | Azospirillum sp. SherDot2 | MPMX19_04441 | | HTH-type transcriptional regulator DmlR | insig. | 52 | 94 |
| o | Sinorhizobium meliloti 1021 | SM_b21291 | | LysR family transcriptional regulator | insig. | 44 | 99 |
| o | Rhizobium sp. OAE497 | ABIE40_RS25230 | | LysR family transcriptional regulator | insig. | 43 | 97 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_3206 | | transcriptional regulator, LysR family (RefSeq) | sig. | 44 | 94 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c05460 | | transcriptional regulator, LysR family | sig. | 46 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 40 | 94 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01123 | | transcriptional regulator, LysR family | insig. | 41 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 40 | 94 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_21990 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 37 | 94 |
| o | Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 40 | 94 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 43 | 92 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | insig. | 39 | 94 |
| o | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 38 | 94 |
| o | Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 37 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5905 | | Transcriptional regulator, LysR family | insig. | 38 | 94 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22295 | | LysR family transcriptional regulator | insig. | 39 | 94 |
| o | Pseudomonas sp. DMC3 | GFF943 | | HTH-type transcriptional regulator DmlR | cofit | 39 | 94 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS06700 | | LysR family transcriptional regulator | insig. | 38 | 94 |
| o | Ralstonia solanacearum UW163 | UW163_RS06915 | | LysR family transcriptional regulator | insig. | 38 | 94 |
| o | Serratia liquefaciens MT49 | IAI46_12425 | | LysR family transcriptional regulator | sig. | 39 | 95 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02593 | | HTH-type transcriptional regulator DmlR | cofit | 38 | 94 |
| | Pseudomonas orientalis W4I3 | QF045_RS13895 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 37 | 94 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 37 | 94 |
| | Pseudomonas sp. RS175 | PFR28_00753 | | HTH-type transcriptional regulator DmlR | insig. | 42 | 94 |
| o | Rahnella sp. WP5 | EX31_RS06010 | | LysR family transcriptional regulator | insig. | 39 | 88 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10570 | | LysR family transcriptional regulator | strong | 39 | 94 |
| | Shewanella loihica PV-4 | Shew_2278 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 94 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 39 | 94 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4454 | | Transcriptional regulator, LysR family | insig. | 40 | 94 |
| | Pseudomonas simiae WCS417 | PS417_16085 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 37 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS11675 | | LysR family transcriptional regulator | insig. | 37 | 93 |
| | Pseudomonas segetis P6 | ACVTMO_RS22150 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4411 | | Transcriptional regulator, LysR family | no data | 36 | 94 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23090 | | LysR family transcriptional regulator | insig. | 40 | 94 |
| | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 41 | 93 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26820 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Ralstonia solanacearum GMI1000 | RS_RS21490 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 93 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10340 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS11615 | | LysR family transcriptional regulator | sig. | 36 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS12185 | | LysR family transcriptional regulator | insig. | 38 | 85 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_636 | | Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme | insig. | 37 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32010 | | LysR substrate-binding domain-containing protein | insig. | 37 | 94 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19070 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00160 | | LysR family transcriptional regulator | no data | 36 | 93 |
| | Ralstonia solanacearum UW163 | UW163_RS13490 | | LysR family transcriptional regulator | no data | 36 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS22650 | | LysR family transcriptional regulator | insig. | 39 | 93 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 35 | 94 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 34 | 93 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0884 | | Transcriptional regulator | insig. | 38 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 34 | 93 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18110 | | LysR family transcriptional regulator | insig. | 39 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_005907 | | DNA-binding transcriptional LysR family regulator | insig. | 37 | 93 |
| | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 37 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20090 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_002082 | | DNA-binding transcriptional LysR family regulator | insig. | 40 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 38 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02887 | | transcriptional regulator, LysR family | no data | 36 | 96 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS17325 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00866 | | transcriptional regulator, LysR family | no data | 39 | 92 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3914 | | Transcriptional regulator, LysR family | insig. | 37 | 95 |
| | Bosea sp. OAE506 | ABIE41_RS06370 | | LysR family transcriptional regulator | insig. | 39 | 94 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS08880 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Ralstonia solanacearum UW163 | UW163_RS04730 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 34 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 34 | 93 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 36 | 94 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Alteromonas macleodii MIT1002 | MIT1002_02164 | | D-malate degradation protein R | insig. | 34 | 93 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09225 | | LysR family transcriptional regulator | insig. | 38 | 92 |
| | Caulobacter crescentus NA1000 | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 38 | 93 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 38 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_04668 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS08395 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 36 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38890 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36620 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05865 | | transcriptional regulator, LysR family | insig. | 36 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03187 | | transcriptional regulator, LysR family | sig. | 35 | 94 |
| | Ralstonia solanacearum GMI1000 | RS_RS06820 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15095 | | LysR family transcriptional regulator | insig. | 34 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS06260 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS16695 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS15205 | | LysR family transcriptional regulator | insig. | 37 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS10025 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| | Rahnella sp. WP5 | EX31_RS16730 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4646.1 | | Transcriptional regulator, LysR family | insig. | 37 | 94 |
| | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 36 | 94 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS10705 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_715 | | Transcriptional regulator, LysR family, in glycolate utilization operon | sig. | 34 | 93 |