Homologs of EX28DRAFT_3885 from Enterobacter asburiae PDN3

DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)
SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KEGG: formamidopyrimidine-DNA glycosylase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Enterobacter asburiae PDN3 EX28DRAFT_3885 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_00100 Formamidopyrimidine-DNA glycosylase insig. 97 100
o Escherichia fergusonii Becca EFB2_00178 Formamidopyrimidine-DNA glycosylase insig. 93 100
o Escherichia coli ECRC100 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase cofit 93 100
o Escherichia coli ECRC101 MCAODC_06145 Formamidopyrimidine-DNA glycosylase insig. 93 100
o Escherichia coli ECRC102 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase insig. 93 100
o Escherichia coli ECRC98 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase insig. 93 100
o Escherichia coli ECRC99 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase no data 93 100
o Escherichia coli BL21 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase insig. 92 100
o Escherichia coli ECOR38 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 92 100
o Escherichia coli ECRC62 BNILDI_04000 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 92 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00067 Formamidopyrimidine-DNA glycosylase cofit 92 100
o Escherichia coli BW25113 b3635 mutM formamidopyrimidine-DNA glycosylase (NCBI) insig. 92 100
o Escherichia coli Nissle 1917 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 92 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 91 100
o Escherichia coli ECOR27 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 92 100
o Klebsiella michiganensis M5al BWI76_RS27330 DNA-formamidopyrimidine glycosylase insig. 90 100
o Klebsiella pneumoniae MKP103 KDGMDA_08015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 90 100
o Erwinia tracheiphila SCR3 LU632_RS21975 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 80 100
o Erwinia amylovora T8 OLJFJH_05810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 80 100
o Pantoea sp. MT58 IAI47_00635 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 79 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18710 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 79 100
o Rahnella sp. WP5 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 80 100
o Serratia liquefaciens MT49 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 77 100
o Pectobacterium carotovorum WPP14 HER17_RS20815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 74 100
o Dickeya dadantii 3937 DDA3937_RS20500 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 73 100
o Dickeya dianthicola 67-19 HGI48_RS00715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 72 100
o Dickeya dianthicola ME23 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase sig. 72 100
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07805 Formamidopyrimidine-DNA glycosylase cofit 76 76
o Vibrio cholerae E7946 ATCC 55056 CSW01_01175 formamidopyrimidine-DNA glycosylase insig. 62 100
o Alteromonas macleodii MIT1002 MIT1002_00057 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Shewanella amazonensis SB2B Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) sig. 57 100
o Shewanella oneidensis MR-1 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) insig. 55 100
o Pseudomonas syringae pv. syringae B728a Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 54 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 54 100
o Shewanella loihica PV-4 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 55 100
o Pseudomonas segetis P6 ACVTMO_RS22040 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0778 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) cofit 52 100
o Shewanella sp. ANA-3 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) cofit 55 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2309 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 54 100
o Pseudomonas aeruginosa PA14 IKLFDK_23650 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 53 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS37540 mutM;go_function=nucleic bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase sig. 53 100
o Pseudomonas sp. SVBP6 COO64_RS12835 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Pseudomonas sp. DMC3 GFF239 Formamidopyrimidine-DNA glycosylase insig. 53 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_979 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 54 100
o Pseudomonas aeruginosa MRSN321 DY961_RS21755 mutM;go_function=nucleic bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 53 100
o Pseudomonas sp. RS175 PFR28_04272 Formamidopyrimidine-DNA glycosylase insig. 52 100
o Pseudomonas fluorescens FW300-N2E3 AO353_08320 5-hydroxymethyluracil DNA glycosylase insig. 52 100
o Pseudomonas putida KT2440 PP_5125 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Pseudomonas stutzeri RCH2 Psest_0239 formamidopyrimidine-DNA glycosylase (fpg) insig. 54 100
o Pseudomonas sp. BP01 JOY50_RS20760 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 52 100
o Lysobacter sp. OAE881 ABIE51_RS00335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5281.1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 51 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03605 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05511 Formamidopyrimidine-DNA glycosylase cofit 54 100
o Pseudomonas simiae WCS417 PS417_26870 5-hydroxymethyluracil DNA glycosylase insig. 53 100
o Pseudomonas fluorescens SBW25 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 53 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 53 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13060 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Rhodanobacter denitrificans MT42 LRK55_RS10505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Pseudomonas orientalis W4I3 QF045_RS01270 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 53 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 53 100
o Pseudomonas fluorescens FW300-N2C3 AO356_13270 5-hydroxymethyluracil DNA glycosylase insig. 53 100
o Methylophilus sp. DMC18 GFF1917 Formamidopyrimidine-DNA glycosylase cofit 50 100
o Marinobacter adhaerens HP15 HP15_3493 formamidopyrimidine-DNA glycosylase insig. 51 90
o Pseudomonas sp. S08-1 OH686_14125 DNA-formamidopyrimidine glycosylase cofit 53 100
o Herbaspirillum seropedicae SmR1 HSERO_RS19545 formamidopyrimidine-DNA glycosylase insig. 49 100
o Cupriavidus basilensis FW507-4G11 RR42_RS02040 formamidopyrimidine-DNA glycosylase insig. 46 100
o Paraburkholderia graminis OAS925 ABIE53_000711 formamidopyrimidine-DNA glycosylase insig. 47 100
o Burkholderia phytofirmans PsJN BPHYT_RS02870 formamidopyrimidine-DNA glycosylase insig. 47 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS01720 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 47 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01934 DNA-(apurinic or apyrimidinic site) lyase insig. 47 100
o Ralstonia solanacearum PSI07 RPSI07_RS22175 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 45 100
o Ralstonia solanacearum GMI1000 RS_RS01975 formamidopyrimidine-DNA glycosylase insig. 45 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11125 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 46 100
o Ralstonia solanacearum UW163 UW163_RS02455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 46 100
o Dechlorosoma suillum PS Dsui_1031 formamidopyrimidine-DNA glycosylase Fpg insig. 47 100
o Acinetobacter radioresistens SK82 MPMX26_02486 Formamidopyrimidine-DNA glycosylase insig. 46 100
o Phaeobacter inhibens DSM 17395 PGA1_c36490 formamidopyrimidine-DNA glycosylase MutM insig. 44 100
o Acinetobacter baumannii LAC-4 RR41_RS03325 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 47 100
o Variovorax sp. SCN45 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 47 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 46 100
o Dinoroseobacter shibae DFL-12 Dshi_3369 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 44 100
o Xanthobacter sp. DMC5 GFF2040 Formamidopyrimidine-DNA glycosylase insig. 45 100
o Castellaniella sp019104865 MT123 ABCV34_RS09265 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 45 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS07015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 43 100
o Azospirillum brasilense Sp245 AZOBR_RS01270 5-hydroxymethyluracil DNA glycosylase insig. 44 100
o Variovorax sp. OAS795 ABID97_RS23725 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 47 100
o Rhodospirillum rubrum S1H Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) insig. 44 100
o Magnetospirillum magneticum AMB-1 AMB_RS03255 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 46 100
o Rhodopseudomonas palustris CGA009 TX73_000435 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 41 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3586 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 42 100
o Azospirillum sp. SherDot2 MPMX19_02764 Formamidopyrimidine-DNA glycosylase insig. 42 100
o Agrobacterium fabrum C58 Atu0321 formamidopyrimidine-DNA glycosylase insig. 40 100
o Sinorhizobium meliloti 1021 SMc01154 formamidopyrimidine-DNA glycosylase insig. 40 100
o Bosea sp. OAE506 ABIE41_RS04205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 40 100
o Sphingobium sp. HT1-2 GFF386 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) cofit 41 100
o Rhizobium sp. OAE497 ABIE40_RS01590 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 41 100