Homologs of CA265_RS23545 from Pedobacter sp. GW460-11-11-14-LB5

NADH dehydrogenase subunit D
SEED: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
KEGG: NADH dehydrogenase I subunit D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23545 NADH dehydrogenase subunit D strong 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17160 NADH-quinone oxidoreductase subunit D no data 82 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14215 NADH dehydrogenase (quinone) subunit D no data 72 96
o Sinorhizobium meliloti 1021 SMa1529 NuoD2 NADH I chain D insig. 42 96
o Azospirillum sp. SherDot2 MPMX19_01743 NADH-quinone oxidoreductase subunit D no data 43 95
o Rhodospirillum rubrum S1H Rru_A1558 NADH dehydrogenase I, D subunit (NCBI) no data 42 95
o Azospirillum brasilense Sp245 AZOBR_RS07180 NADH dehydrogenase no data 43 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3684 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) cofit 41 95
o Variovorax sp. SCN45 GFF4753 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 40 95
o Burkholderia phytofirmans PsJN BPHYT_RS06640 NADH-quinone oxidoreductase subunit D no data 40 95
o Acidovorax sp. GW101-3H11 Ac3H11_1449 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 40 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04570 NADH dehydrogenase subunit D no data 40 95
o Paraburkholderia graminis OAS925 ABIE53_001593 NADH-quinone oxidoreductase subunit D no data 40 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04260 NADH-quinone oxidoreductase subunit C/D insig. 41 96
o Ralstonia solanacearum PSI07 RPSI07_RS14350 NADH-quinone oxidoreductase subunit NuoD no data 40 95
o Variovorax sp. OAS795 ABID97_RS20480 NADH-quinone oxidoreductase subunit D no data 40 95
o Ralstonia solanacearum GMI1000 RS_RS10330 NADH-quinone oxidoreductase subunit NuoD no data 40 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS14865 NADH-quinone oxidoreductase subunit D no data 40 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS02960 NADH-quinone oxidoreductase subunit NuoD no data 40 95
o Ralstonia solanacearum UW163 UW163_RS10765 NADH-quinone oxidoreductase subunit NuoD no data 40 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS24135 NADH-quinone oxidoreductase subunit D no data 40 95
o Cupriavidus basilensis FW507-4G11 RR42_RS05525 NADH dehydrogenase subunit D no data 39 95
o Magnetospirillum magneticum AMB-1 AMB_RS13995 NADH-quinone oxidoreductase subunit D no data 39 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06405 NADH-quinone oxidoreductase subunit D no data 41 95
  Shewanella oneidensis MR-1 SO1019 nuoCD NADH dehydrogenase I, C/D subunits (NCBI ptt file) cofit 42 95
o Castellaniella sp019104865 MT123 ABCV34_RS08735 NADH-quinone oxidoreductase subunit D no data 40 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06100 NADH-quinone oxidoreductase subunit D no data 38 95
o Herbaspirillum seropedicae SmR1 HSERO_RS08835 NADH dehydrogenase subunit D no data 39 95
o Phaeobacter inhibens DSM 17395 PGA1_c10400 NADH-quinone oxidoreductase subunit D no data 39 95
o Dechlorosoma suillum PS Dsui_3047 NADH dehydrogenase I, D subunit no data 39 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1986.1 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 38 95
o Rhodanobacter denitrificans MT42 LRK55_RS00890 NADH-quinone oxidoreductase subunit D no data 37 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01115 NADH-quinone oxidoreductase subunit D no data 37 95
o Rhodanobacter sp. FW510-T8 OKGIIK_05780 nuoD NADH-quinone oxidoreductase subunit D no data 37 95
  Pseudomonas sp. S08-1 OH686_00145 NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone oxidoreductase chain D strong 39 95
o Kangiella aquimarina DSM 16071 B158DRAFT_0124 NADH dehydrogenase subunit D (EC 1.6.5.3) strong 37 95
o Dinoroseobacter shibae DFL-12 Dshi_1311 NADH dehydrogenase I, D subunit (RefSeq) no data 39 95
o Lysobacter sp. OAE881 ABIE51_RS08325 NADH-quinone oxidoreductase subunit D no data 38 95
o Rhodopseudomonas palustris CGA009 TX73_015280 NADH-quinone oxidoreductase subunit D no data 38 95
  Pantoea sp. MT58 IAI47_06370 NADH-quinone oxidoreductase subunit C/D strong 41 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2631 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) strong 38 97
  Pseudomonas simiae WCS417 PS417_16585 NADH:ubiquinone oxidoreductase no data 39 95
o Mycobacterium tuberculosis H37Rv Rv3148 Probable NADH dehydrogenase I (chain D) NuoD (NADH-ubiquinone oxidoreductase chain D) strong 38 97
  Pseudomonas fluorescens SBW25 PFLU_RS18625 NADH-quinone oxidoreductase subunit C/D strong 39 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18625 NADH-quinone oxidoreductase subunit C/D strong 39 95
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0709 NADH dehydrogenase subunit D (EC 1.6.5.3) no data 38 98
  Pseudomonas putida KT2440 PP_4121 NADH-quinone oxidoreductase subunit C/D strong 39 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4039 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) strong 38 95
  Pseudomonas fluorescens FW300-N2C3 AO356_22060 NADH:ubiquinone oxidoreductase no data 39 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_275 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 39 95
o Caulobacter crescentus NA1000 CCNA_02029 NADH-quinone oxidoreductase chain D no data 38 95
o Caulobacter crescentus NA1000 Δfur CCNA_02029 NADH-quinone oxidoreductase chain D no data 38 95
  Pseudomonas syringae pv. syringae B728a Psyr_3199 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C sig. 38 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3199 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C strong 38 95
  Pseudomonas fluorescens FW300-N2E3 AO353_27750 NADH:ubiquinone oxidoreductase no data 38 95
  Enterobacter sp. TBS_079 MPMX20_03216 NADH-quinone oxidoreductase subunit C/D strong 40 95
  Enterobacter asburiae PDN3 EX28DRAFT_0323 NADH (or F420H2) dehydrogenase, subunit C strong 40 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1889 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) strong 40 98
  Rhodopseudomonas palustris CGA009 TX73_022080 NADH-quinone oxidoreductase subunit C/D strong 38 96
  Escherichia coli BW25113 b2286 nuoC NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) strong 39 96
  Serratia liquefaciens MT49 IAI46_17700 NADH-quinone oxidoreductase subunit C/D cofit 39 95
  Rhizobium sp. OAE497 ABIE40_RS07190 NADH-quinone oxidoreductase subunit D no data 37 95
o Rhizobium sp. OAE497 ABIE40_RS30730 NADH-quinone oxidoreductase subunit D cofit 37 95
  Escherichia fergusonii Becca EFB2_01573 NADH-quinone oxidoreductase subunit C/D insig. 39 96
  Escherichia coli Nissle 1917 ECOLIN_RS13275 NADH-quinone oxidoreductase subunit C/D strong 39 96
  Erwinia tracheiphila SCR3 LU632_RS07975 nuoC NADH-quinone oxidoreductase subunit C/D strong 39 95
  Pseudomonas sp. RS175 PFR28_02629 NADH-quinone oxidoreductase subunit C/D no data 38 95
  Escherichia coli BL21 ECD_02211 NADH:ubiquinone oxidoreductase, fused CD subunit strong 39 96
  Escherichia coli ECOR27 NOLOHH_14470 nuoC NADH-quinone oxidoreductase subunit C/D cofit 39 96
  Escherichia coli ECOR38 HEPCGN_22055 nuoC NADH-quinone oxidoreductase subunit C/D cofit 39 96
  Escherichia coli ECRC101 OKFHMN_22850 nuoC NADH-quinone oxidoreductase subunit C/D insig. 39 96
  Escherichia coli ECRC101 MCAODC_13890 nuoC NADH-quinone oxidoreductase subunit C/D strong 39 96
  Escherichia coli ECRC102 NIAGMN_20620 nuoC NADH-quinone oxidoreductase subunit C/D insig. 39 96
  Escherichia coli ECRC62 BNILDI_13390 nuoC NADH-quinone oxidoreductase subunit C/D sig. 39 96
  Escherichia coli ECRC98 JDDGAC_26815 nuoC NADH-quinone oxidoreductase subunit C/D no data 39 96
  Escherichia coli ECRC99 KEDOAH_05345 nuoC NADH-quinone oxidoreductase subunit C/D no data 39 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01420 NADH-quinone oxidoreductase subunit C/D sig. 39 96
  Klebsiella michiganensis M5al BWI76_RS20180 NADH-quinone oxidoreductase subunit C/D strong 39 96
  Dickeya dianthicola ME23 DZA65_RS14975 NADH-quinone oxidoreductase subunit C/D no data 39 98
  Dickeya dadantii 3937 DDA3937_RS14325 NADH-quinone oxidoreductase subunit C/D no data 38 98
  Dickeya dianthicola 67-19 HGI48_RS14300 NADH-quinone oxidoreductase subunit C/D insig. 38 98
o Agrobacterium fabrum C58 Atu1272 NADH ubiquinone oxidoreductase chain D no data 37 95
  Pectobacterium carotovorum WPP14 HER17_RS07135 NADH-quinone oxidoreductase subunit C/D cofit 39 95
  Rahnella sp. WP5 EX31_RS19425 NADH-quinone oxidoreductase subunit C/D cofit 38 96
  Sinorhizobium meliloti 1021 SMc01915 NADH dehydrogenase subunit D no data 37 95
  Acinetobacter radioresistens SK82 MPMX26_02553 NADH-quinone oxidoreductase subunit C/D no data 37 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10150 NADH-quinone oxidoreductase subunit D no data 38 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18290 NADH dehydrogenase subunit D strong 37 98
o Synechococcus elongatus PCC 7942 Synpcc7942_1743 ndhH NAD(P)H-quinone oxidoreductase subunit H no data 36 97
o Desulfovibrio vulgaris Miyazaki F DvMF_1596 NADH dehydrogenase (quinone) (RefSeq) strong 35 98
  Bacteroides thetaiotaomicron VPI-5482 BT4065 NADH dehydrogenase I, chain D (NCBI ptt file) insig. 35 96
  Bacteroides stercoris CC31F HMPREF1181_RS09010 NADH-quinone oxidoreductase subunit D sig. 34 95
  Bacteroides ovatus ATCC 8483 BACOVA_04860 respiratory-chain NADH dehydrogenase, 49 Kd subunit insig. 34 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13325 NADH-quinone oxidoreductase subunit D insig. 33 95
  Phocaeicola dorei CL03T12C01 ABI39_RS08530 NADH-quinone oxidoreductase subunit D insig. 33 95
  Rhodospirillum rubrum S1H Rru_A1425 NADH dehydrogenase (ubiquinone) (NCBI) insig. 29 94
  Desulfovibrio vulgaris Miyazaki F DvMF_1522 NADH-ubiquinone oxidoreductase chain 49kDa (RefSeq) cofit 29 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU2291 carbon monoxide-induced hydrogenase CooH, putative (TIGR) insig. 28 97
  Desulfovibrio vulgaris Miyazaki F DvMF_3189 NADH dehydrogenase (quinone) (RefSeq) sig. 28 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU0430 Ech hydrogenase, subunit EchE, putative (TIGR) sig. 26 93