Homologs of AO353_04530 from Pseudomonas fluorescens FW300-N2E3

LPS export ABC transporter permease LptF
SEED: FIG000988: Predicted permease
KEGG: lipopolysaccharide export system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E3 AO353_04530 LPS export ABC transporter permease LptF no data 100 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_897 FIG000988: Predicted permease no data 91 100
o Pseudomonas fluorescens FW300-N2C3 AO356_17475 LPS export ABC transporter permease LptF no data 91 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5421 FIG000988: Predicted permease no data 90 100
o Pseudomonas sp. RS175 PFR28_03527 Lipopolysaccharide export system permease protein LptF no data 88 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4844 FIG000988: Predicted permease no data 88 100
o Pseudomonas simiae WCS417 PS417_05170 permease no data 84 100
o Pseudomonas fluorescens SBW25 PFLU_RS05240 LPS export ABC transporter permease LptF no data 84 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05240 LPS export ABC transporter permease LptF no data 84 100
o Pseudomonas syringae pv. syringae B728a Psyr_1092 permease YjgP/YjgQ no data 78 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1092 permease YjgP/YjgQ no data 78 100
o Pseudomonas putida KT2440 PP_0982 Permease YjgP/YjgQ family protein no data 81 100
o Pseudomonas stutzeri RCH2 Psest_1236 Predicted permeases no data 73 100
o Pseudomonas sp. S08-1 OH686_07805 LPS export ABC transporter permease LptF no data 73 100
o Marinobacter adhaerens HP15 HP15_1316 permease YjgP/YjgQ family protein no data 51 94
o Shewanella amazonensis SB2B Sama_0796 hypothetical protein (RefSeq) no data 37 98
o Alteromonas macleodii MIT1002 MIT1002_03198 Lipopolysaccharide export system permease protein LptF no data 37 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_12675 LPS export ABC transporter permease LptF no data 38 91
o Shewanella loihica PV-4 Shew_0940 permease YjgP/YjgQ family protein (RefSeq) no data 36 95
o Shewanella sp. ANA-3 Shewana3_3005 permease YjgP/YjgQ family protein (RefSeq) no data 39 94
o Shewanella oneidensis MR-1 SO1369 conserved hypothetical protein (NCBI ptt file) no data 39 94
o Pectobacterium carotovorum WPP14 HER17_RS19445 LPS export ABC transporter permease LptF no data 34 96
o Acinetobacter radioresistens SK82 MPMX26_00158 Lipopolysaccharide export system permease protein LptF no data 35 94
o Kangiella aquimarina DSM 16071 B158DRAFT_1168 Predicted permeases no data 35 90
o Enterobacter sp. TBS_079 MPMX20_04117 Lipopolysaccharide export system permease protein LptF no data 35 99
o Enterobacter asburiae PDN3 EX28DRAFT_3266 Predicted permeases no data 34 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS25210 LPS export ABC transporter permease LptF no data 30 100
o Burkholderia phytofirmans PsJN BPHYT_RS04790 permease no data 30 100
o Pantoea sp. MT58 IAI47_16790 LPS export ABC transporter permease LptF no data 33 100
o Lysobacter sp. OAE881 ABIE51_RS04480 LPS export ABC transporter permease LptF no data 35 94
o Escherichia coli BL21 ECD_04127 lipopolysaccharide export ABC permease no data 35 99
o Escherichia coli BW25113 b4261 yjgP conserved inner membrane protein (NCBI) no data 35 99
o Escherichia coli ECOR27 NOLOHH_04050 lptF LPS export ABC transporter permease LptF no data 35 99
o Escherichia coli ECOR38 HEPCGN_09975 lptF LPS export ABC transporter permease LptF no data 35 99
o Escherichia coli ECRC101 OKFHMN_11785 lptF LPS export ABC transporter permease LptF no data 35 99
o Escherichia coli ECRC101 MCAODC_02290 lptF LPS export ABC transporter permease LptF no data 35 99
o Escherichia coli ECRC62 BNILDI_07465 lptF LPS export ABC transporter permease LptF no data 35 99
o Escherichia coli ECRC99 KEDOAH_16370 lptF LPS export ABC transporter permease LptF no data 35 99
o Klebsiella michiganensis M5al BWI76_RS03050 LPS export ABC transporter permease LptF no data 33 96
o Escherichia coli Nissle 1917 ECOLIN_RS24700 LPS export ABC transporter permease LptF no data 35 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00122 lipopolysaccharide export system permease protein no data 29 100
o Erwinia tracheiphila SCR3 LU632_RS20850 lptF LPS export ABC transporter permease LptF no data 32 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF950 FIG000988: Predicted permease no data 36 88
o Escherichia fergusonii Becca EFB2_04274 Lipopolysaccharide export system permease protein LptF no data 34 97
o Escherichia coli ECRC102 NIAGMN_09635 lptF LPS export ABC transporter permease LptF no data 34 97
o Escherichia coli ECRC98 JDDGAC_15425 lptF LPS export ABC transporter permease LptF no data 34 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03775 Lipopolysaccharide export system permease protein LptF no data 34 97
o Serratia liquefaciens MT49 IAI46_02365 LPS export ABC transporter permease LptF no data 35 98
o Ralstonia solanacearum PSI07 RPSI07_RS12820 LPS export ABC transporter permease LptF no data 32 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04555 LPS export ABC transporter permease LptF no data 33 91
o Ralstonia solanacearum UW163 UW163_RS09115 LPS export ABC transporter permease LptF no data 33 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS00155 LPS export ABC transporter permease LptF no data 31 92
o Ralstonia solanacearum GMI1000 RS_RS12125 LPS export ABC transporter permease LptF no data 32 94
o Dickeya dadantii 3937 DDA3937_RS02000 LPS export ABC transporter permease LptF no data 34 98
o Dickeya dianthicola ME23 DZA65_RS02065 LPS export ABC transporter permease LptF no data 34 98
o Rahnella sp. WP5 EX31_RS04380 LPS export ABC transporter permease LptF no data 33 97
o Dickeya dianthicola 67-19 HGI48_RS01960 LPS export ABC transporter permease LptF no data 34 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19110 LPS export ABC transporter permease LptF no data 31 92
o Herbaspirillum seropedicae SmR1 HSERO_RS15595 permease no data 31 91
o Dechlorosoma suillum PS Dsui_3535 putative permease no data 30 93
o Cupriavidus basilensis FW507-4G11 RR42_RS16230 permease no data 32 92
o Rhodanobacter sp. FW510-T8 OKGIIK_11555 lptF LPS export ABC transporter permease LptF no data 32 95
  Paraburkholderia graminis OAS925 ABIE53_001234 lipopolysaccharide export system permease protein no data 31 70
o Acidovorax sp. GW101-3H11 Ac3H11_2400 FIG000988: Predicted permease no data 30 85
o Rhodanobacter denitrificans MT42 LRK55_RS12115 LPS export ABC transporter permease LptF no data 32 88
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12380 LPS export ABC transporter permease LptF no data 32 88
o Variovorax sp. SCN45 GFF241 Lipopolysaccharide export system permease protein LptF no data 26 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4445.1 FIG000988: Predicted permease no data 33 72
o Castellaniella sp019104865 MT123 ABCV34_RS08290 LPS export ABC transporter permease LptF no data 30 91
o Variovorax sp. OAS795 ABID97_RS16585 LPS export ABC transporter permease LptF no data 27 93
  Serratia liquefaciens MT49 IAI46_16575 LPS export ABC transporter permease LptF insig. 26 93
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4308 FIG000988: Predicted permease no data 24 84
  Escherichia coli ECOR27 NOLOHH_10875 lptF LPS export ABC transporter permease LptF insig. 29 91
  Escherichia coli ECRC62 BNILDI_00640 lptF LPS export ABC transporter permease LptF insig. 29 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00719 hypothetical protein insig. 29 91
  Escherichia coli BL21 ECD_02856 hypothetical protein cofit 29 91
  Escherichia coli ECOR38 HEPCGN_17955 lptF LPS export ABC transporter permease LptF cofit 29 91
  Escherichia fergusonii Becca EFB2_00827 hypothetical protein insig. 29 91
  Escherichia coli Nissle 1917 ECOLIN_RS17180 LPS export ABC transporter permease LptF insig. 29 91
  Bosea sp. OAE506 ABIE41_RS17715 LPS export ABC transporter permease LptF no data 26 72
  Rhodospirillum rubrum S1H Rru_A2943 permease YjgP/YjgQ (NCBI) no data 28 63
o Magnetospirillum magneticum AMB-1 AMB_RS18800 LPS export ABC transporter permease LptF no data 25 88
o Azospirillum sp. SherDot2 MPMX19_04966 hypothetical protein no data 28 83
o Rhodopseudomonas palustris CGA009 TX73_015835 LPS export ABC transporter permease LptF no data 23 64
o Synechococcus elongatus PCC 7942 Synpcc7942_0512 ycf84 conserved hypothetical protein YCF84 no data 24 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3506 Predicted permeases strong 26 94
  Caulobacter crescentus NA1000 CCNA_01213 YjgP/YjgQ family membrane permease no data 25 79
  Caulobacter crescentus NA1000 Δfur CCNA_01213 YjgP/YjgQ family membrane permease strong 25 79
o Desulfovibrio vulgaris Hildenborough JW710 DVU1662 permease, putative (TIGR) no data 23 83
  Bacteroides stercoris CC31F HMPREF1181_RS14350 YjgP/YjgQ family permease no data 26 77
o Desulfovibrio vulgaris Miyazaki F DvMF_0376 permease YjgP/YjgQ family protein (RefSeq) no data 23 83
  Rhizobium sp. OAE497 ABIE40_RS06415 LptF/LptG family permease no data 24 77
  Caulobacter crescentus NA1000 CCNA_01762 YjgP/YjgQ family membrane permease no data 30 53
  Caulobacter crescentus NA1000 Δfur CCNA_01762 YjgP/YjgQ family membrane permease no data 30 53
  Sinorhizobium meliloti 1021 SMc00584 hypothetical protein no data 25 68
  Dechlorosoma suillum PS Dsui_3534 putative permease no data 26 94
  Bacteroides ovatus ATCC 8483 BACOVA_02569 permease, YjgP/YjgQ family no data 22 82
  Castellaniella sp019104865 MT123 ABCV34_RS10710 LPS export ABC transporter permease LptG no data 25 79
  Phaeobacter inhibens DSM 17395 PGA1_c19810 Predicted permeases no data 25 43
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4444.1 FIG000906: Predicted Permease no data 25 44