| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2973 | | transcriptional regulator (NCBI ptt file) | strong | 100 | 100 |
| o | Bacteroides ovatus ATCC 8483 | BACOVA_02195 | | transcriptional regulator, AraC family | insig. | 82 | 98 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2372 | | transcriptional regulator (NCBI ptt file) | sig. | 53 | 100 |
| | Pseudomonas protegens RBAN4 | FABNJH_08105 | araC | Transcriptional regulator, AraC family | insig. | 43 | 93 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1576 | | transcriptional regulator, AraC family (RefSeq) | insig. | 40 | 97 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0277 | | transcriptional regulator, AraC family (TIGR) | insig. | 42 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS00095 | | AraC family transcriptional regulator | insig. | 38 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS00025 | | AraC family transcriptional regulator | insig. | 37 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_02438 | | DNA gyrase inhibitor | insig. | 37 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS22525 | | AraC family transcriptional regulator | insig. | 42 | 94 |
| | Variovorax sp. SCN45 | GFF3429 | | Transcriptional regulator, AraC family | insig. | 40 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4190 | | transcriptional regulator, AraC family | insig. | 41 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4832 | | transcriptional regulator, AraC type; possible DNA gyrase inhibitor | insig. | 35 | 91 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1904 | | transcriptional regulator, AraC-type (NCBI ptt file) | insig. | 38 | 100 |
| | Azospirillum brasilense Sp245 | AZOBR_RS00835 | | transcriptional regulator | insig. | 33 | 97 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01480 | | transcriptional regulator, effector binding domain protein | insig. | 38 | 100 |
| | Rhodopseudomonas palustris CGA009 | TX73_004525 | | AraC family transcriptional regulator | insig. | 32 | 93 |
| | Rhodopseudomonas palustris CGA009 | TX73_006805 | | AraC family transcriptional regulator | insig. | 42 | 86 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS07810 | | AraC family transcriptional regulator | insig. | 41 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS29955 | | AraC family transcriptional regulator | insig. | 42 | 86 |
| | Pseudomonas segetis P6 | ACVTMO_RS17725 | | AraC family transcriptional regulator | insig. | 40 | 84 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02999 | | transcriptional regulator, AraC family | insig. | 41 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33620 | | GlxA family transcriptional regulator | insig. | 37 | 87 |
| | Pseudomonas sp. SVBP6 | COO64_RS14840 | | GyrI-like domain-containing protein | insig. | 38 | 87 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0530 | | transcriptional regulator, AraC family (RefSeq) | insig. | 39 | 82 |
| | Pantoea sp. MT58 | IAI47_05640 | | helix-turn-helix transcriptional regulator | insig. | 41 | 81 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02865 | | HTH-type transcriptional activator RhaR | insig. | 36 | 92 |
| | Shewanella loihica PV-4 | Shew_0371 | | AraC family transcriptional regulator (RefSeq) | insig. | 40 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_005062 | | AraC family transcriptional regulator | sig. | 39 | 86 |
| | Rhizobium sp. OAE497 | ABIE40_RS10300 | | AraC family transcriptional regulator | insig. | 33 | 91 |
| | Pectobacterium carotovorum WPP14 | HER17_RS19395 | | AraC family transcriptional regulator | cofit | 37 | 91 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20800 | | AraC family transcriptional regulator | insig. | 32 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1249 | | Transcriptional regulator, AraC family | insig. | 41 | 85 |
| | Rhodospirillum rubrum S1H | Rru_A0536 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 40 | 77 |
| | Rahnella sp. WP5 | EX31_RS13520 | | AraC family transcriptional regulator | insig. | 34 | 91 |
| | Serratia liquefaciens MT49 | IAI46_11980 | | helix-turn-helix transcriptional regulator | insig. | 42 | 79 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_08275 | | AraC family transcriptional regulator | insig. | 37 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS10660 | | AraC family transcriptional regulator | insig. | 35 | 88 |
| | Azospirillum sp. SherDot2 | MPMX19_01363 | | HTH-type transcriptional activator RhaS | insig. | 34 | 93 |
| | Xanthobacter sp. DMC5 | GFF3513 | | HTH-type transcriptional activator RhaS | insig. | 33 | 92 |
| | Pseudomonas stutzeri RCH2 | Psest_3080 | | AraC-type DNA-binding domain-containing proteins | sig. | 32 | 97 |
| | Pectobacterium carotovorum WPP14 | HER17_RS13315 | | AraC family transcriptional regulator | insig. | 40 | 79 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS06080 | | response regulator transcription factor | insig. | 38 | 88 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01693 | | Arabinose operon regulatory protein | insig. | 35 | 89 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16740 | | AraC family transcriptional regulator | insig. | 35 | 89 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01729 | | Arabinose operon regulatory protein | insig. | 35 | 89 |
| | Pseudomonas sp. S08-1 | OH686_19610 | | Transcriptional regulator, AraC family | insig. | 34 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26630 | | AraC family transcriptional regulator | insig. | 34 | 97 |
| | Dickeya dadantii 3937 | DDA3937_RS14520 | | AraC family transcriptional regulator | insig. | 41 | 86 |
| | Pseudomonas simiae WCS417 | PS417_23415 | | AraC family transcriptional regulator | sig. | 37 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3667 | | transcriptional regulator (NCBI ptt file) | insig. | 38 | 87 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_05170 | | AraC family transcriptional regulator | insig. | 35 | 91 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_00680 | sbmC | AraC family transcriptional regulator | insig. | 35 | 91 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3136 | | Uncharacterized protein ygiV | insig. | 35 | 89 |
| | Pseudomonas putida KT2440 | PP_2383 | | Transcriptional regulator, AraC family | sig. | 34 | 88 |
| | Pseudomonas segetis P6 | ACVTMO_RS07035 | | AraC family transcriptional regulator | insig. | 33 | 88 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_03274 | glxA | GlxA family transcriptional regulator | strong | 36 | 85 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_03310 | glxA | GlxA family transcriptional regulator | strong | 36 | 85 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_04356 | | Proline utilization regulator | insig. | 33 | 88 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03355 | | AraC family transcriptional regulator | sig. | 33 | 88 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_04412 | | Proline utilization regulator | insig. | 33 | 88 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_09010 | | AraC family transcriptional regulator | sig. | 36 | 85 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4608 | | L-rhamnose operon transcriptional activator RhaR | insig. | 39 | 83 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS25245 | | helix-turn-helix transcriptional regulator | insig. | 36 | 84 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25245 | | helix-turn-helix transcriptional regulator | sig. | 36 | 84 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25180 | | AraC family transcriptional regulator | insig. | 35 | 84 |
| | Acinetobacter baumannii LAC-4 | RR41_RS12805 | | AraC family transcriptional regulator | insig. | 35 | 86 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03433 | | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 35 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_005356 | | transcriptional regulator GlxA family with amidase domain | strong | 35 | 89 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05614 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 35 | 87 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_83 | | transcriptional regulator, AraC family | insig. | 34 | 91 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4154 | | Transcriptional regulator, AraC family | insig. | 38 | 91 |
| | Rhizobium sp. OAE497 | ABIE40_RS22540 | | AraC family transcriptional regulator | strong | 32 | 86 |
| | Marinobacter adhaerens HP15 | HP15_2741 | | transcriptional regulator, AraC family protein | insig. | 38 | 84 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_28535 | | AraC family transcriptional regulator | insig. | 35 | 91 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4142 | | conserved hypothetical protein (NCBI ptt file) | insig. | 38 | 90 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS25095 | | AraC family transcriptional regulator | insig. | 33 | 88 |
| | Pseudomonas sp. S08-1 | OH686_05335 | | Transcriptional regulator, AraC family | insig. | 32 | 89 |
| | Pseudomonas segetis P6 | ACVTMO_RS14525 | | helix-turn-helix domain-containing protein | cofit | 33 | 92 |
| | Enterobacter sp. TBS_079 | MPMX20_02241 | | HTH-type transcriptional activator RhaS | sig. | 37 | 84 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04870 | | AraC family transcriptional regulator | strong | 37 | 84 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS40765 | | helix-turn-helix domain-containing protein | insig. | 36 | 88 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3186 | | Transcriptional regulator, AraC family | insig. | 34 | 86 |
| | Marinobacter adhaerens HP15 | HP15_2206 | | AraC-type DNA-binding domain-containing protein | cofit | 39 | 80 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS17030 | | AraC family transcriptional regulator | insig. | 31 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS00650 | | AraC family transcriptional regulator | insig. | 32 | 90 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2318 | | FIG229276: Transcriptional regulator, AraC family | insig. | 38 | 82 |
| | Pseudomonas protegens RBAN4 | FABNJH_29550 | araC | Transcriptional regulator, AraC family | insig. | 36 | 86 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_988 | | FIG229276: Transcriptional regulator, AraC family | insig. | 36 | 86 |
| | Pseudomonas sp. SVBP6 | COO64_RS11410 | | AraC family transcriptional regulator | insig. | 36 | 84 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_10750 | | AraC family transcriptional regulator | no data | 33 | 87 |
| | Erwinia tracheiphila SCR3 | LU632_RS00855 | | helix-turn-helix domain-containing protein | insig. | 33 | 87 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_11200 | | AraC family transcriptional regulator | insig. | 32 | 88 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3957 | | transcriptional regulator (NCBI ptt file) | insig. | 36 | 87 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2399.1 | | FIG024214: Transcriptional regulator, AraC family | insig. | 35 | 87 |
| | Dickeya dadantii 3937 | DDA3937_RS08700 | | helix-turn-helix domain-containing protein | insig. | 36 | 87 |
| | Methylophilus sp. DMC18 | GFF890 | | HTH-type transcriptional activator RhaR | insig. | 32 | 93 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18340 | | helix-turn-helix domain-containing protein | insig. | 35 | 85 |
| | Enterobacter sp. TBS_079 | MPMX20_02552 | | HTH-type transcriptional activator RhaR | insig. | 36 | 91 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04830 | | HTH-type transcriptional activator RhaS | cofit | 35 | 83 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS27175 | | AraC family transcriptional regulator | insig. | 34 | 86 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01620 | | AraC family transcriptional regulator | insig. | 36 | 87 |
| | Rhizobium sp. OAE497 | ABIE40_RS12690 | | AraC family transcriptional regulator | insig. | 35 | 91 |
| | Pseudomonas sp. SVBP6 | COO64_RS23290 | | GyrI-like domain-containing protein | insig. | 34 | 91 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_28650 | | AraC family transcriptional regulator | insig. | 33 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_006161 | | transcriptional regulator GlxA family with amidase domain | insig. | 32 | 88 |
| | Agrobacterium fabrum C58 | Atu4659 | | AraC family transcriptional regulator | strong | 31 | 91 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS05930 | | helix-turn-helix domain-containing protein | insig. | 39 | 79 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02454 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 32 | 88 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS02940 | | response regulator | insig. | 37 | 87 |
| | Pseudomonas segetis P6 | ACVTMO_RS08580 | | AraC family transcriptional regulator | insig. | 36 | 86 |
| | Pseudomonas protegens RBAN4 | FABNJH_05175 | | HTH araC/xylS-type domain-containing protein | insig. | 35 | 83 |
| | Azospirillum brasilense Sp245 | AZOBR_RS26585 | | AraC family transcriptional regulator | insig. | 34 | 80 |
| | Pseudomonas simiae WCS417 | PS417_01425 | | AraC family transcriptional regulator | insig. | 34 | 88 |
| | Lysobacter sp. OAE881 | ABIE51_RS03340 | | AraC family transcriptional regulator | insig. | 33 | 87 |
| | Pseudomonas sp. RS175 | PFR28_02652 | | HTH-type transcriptional regulator CdhR | insig. | 32 | 87 |
| | Klebsiella michiganensis M5al | BWI76_RS15355 | | transcriptional regulator FtrA | insig. | 29 | 97 |
| | Serratia liquefaciens MT49 | IAI46_05420 | | helix-turn-helix transcriptional regulator | insig. | 33 | 85 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 36 | 84 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 36 | 84 |
| | Methylophilus sp. DMC18 | GFF2636 | | HTH-type transcriptional activator RhaS | insig. | 35 | 80 |
| | Pseudomonas sp. SVBP6 | COO64_RS07890 | | AraC family transcriptional regulator | no data | 35 | 85 |
| | Pseudomonas sp. DMC3 | GFF1896 | | HTH-type transcriptional activator RhaS | cofit | 34 | 84 |
| | Shewanella loihica PV-4 | Shew_0071 | | AraC family transcriptional regulator (RefSeq) | insig. | 33 | 80 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17815 | | bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase | insig. | 29 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS21325 | | bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase | insig. | 29 | 97 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c30530 | | HTH-type transcriptional regulator, AraC family | insig. | 35 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_004081 | | AraC-like DNA-binding protein | insig. | 34 | 86 |
| | Dechlorosoma suillum PS | Dsui_2034 | | DNA gyrase inhibitor | insig. | 33 | 99 |
| | Pectobacterium carotovorum WPP14 | HER17_RS21035 | | transcriptional regulator FtrA | insig. | 33 | 86 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23660 | | AraC family transcriptional regulator | insig. | 33 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_004694 | | AraC family transcriptional regulator | insig. | 31 | 84 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01747 | | Transcriptional regulator | insig. | 31 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16365 | | AraC family transcriptional regulator | insig. | 31 | 95 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01783 | | Transcriptional regulator | sig. | 31 | 95 |
| | Sinorhizobium meliloti 1021 | SM_b21649 | | AraC family transcriptional regulator | strong | 30 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS15480 | | helix-turn-helix domain-containing protein | insig. | 36 | 84 |
| | Sinorhizobium meliloti 1021 | SM_b21559 | | AraC family transcriptional regulator | insig. | 32 | 86 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03562 | | AraC family transcriptional regulator | insig. | 30 | 84 |
| | Ralstonia solanacearum GMI1000 | RS_RS23160 | | AraC family transcriptional regulator | insig. | 27 | 97 |
| | Caulobacter crescentus NA1000 | CCNA_02482 | | AraC-family transcriptional regulator | cofit | 35 | 84 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02482 | | AraC-family transcriptional regulator | cofit | 35 | 84 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS00535 | | AraC family transcriptional regulator | insig. | 35 | 87 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00290 | | helix-turn-helix transcriptional regulator | insig. | 34 | 86 |
| | Pseudomonas sp. RS175 | PFR28_02129 | | HTH-type transcriptional regulator CdhR | insig. | 34 | 84 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02881 | | response regulator receiver domain protein | insig. | 33 | 87 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0480 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 33 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23455 | | AraC family transcriptional regulator | insig. | 32 | 88 |
| | Shewanella amazonensis SB2B | Sama_0076 | | transcription activator, effector binding (RefSeq) | insig. | 31 | 86 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_02553 | ftrA | transcriptional regulator FtrA | sig. | 29 | 97 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_21440 | | transcriptional regulator FtrA | insig. | 29 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28635 | | AraC family transcriptional regulator | insig. | 36 | 85 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS01165 | | helix-turn-helix transcriptional regulator | insig. | 34 | 86 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18330 | | AraC family transcriptional regulator | insig. | 34 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18330 | | AraC family transcriptional regulator | insig. | 34 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20285 | | AraC family transcriptional regulator | insig. | 33 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08030 | | GlxA family transcriptional regulator | insig. | 33 | 88 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10040 | | AraC family transcriptional regulator | insig. | 30 | 90 |
| | Ralstonia solanacearum UW163 | UW163_RS03540 | | AraC family transcriptional regulator | insig. | 30 | 90 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34420 | | AraC family transcriptional regulator | insig. | 30 | 84 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS23330 | | AraC family transcriptional regulator | insig. | 30 | 90 |
| | Variovorax sp. SCN45 | GFF1185 | | Transcriptional regulator, AraC family | insig. | 37 | 75 |
| | Bosea sp. OAE506 | ABIE41_RS20340 | | AraC family transcriptional regulator | insig. | 35 | 84 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01061 | mdrR1 | transcriptional regulator MdrR1 | insig. | 33 | 84 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20095 | | transcriptional regulator MdrR1 | insig. | 33 | 84 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01065 | mdrR1 | transcriptional regulator MdrR1 | strong | 33 | 84 |
| | Pseudomonas sp. SVBP6 | COO64_RS08160 | | GlxA family transcriptional regulator | insig. | 31 | 82 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16980 | | GlxA family transcriptional regulator | insig. | 27 | 88 |
| | Caulobacter crescentus NA1000 | CCNA_03054 | | AraC-family transcriptional regulator | cofit | 34 | 80 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03054 | | AraC-family transcriptional regulator | cofit | 34 | 80 |
| | Sinorhizobium meliloti 1021 | SM_b21336 | | AraC family transcriptional regulator | insig. | 34 | 87 |
| | Pseudomonas sp. RS175 | PFR28_02269 | | HTH-type transcriptional activator RhaS | insig. | 33 | 86 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1563 | | Transcriptional regulator, AraC family | insig. | 32 | 87 |
| | Pseudomonas sp. RS175 | PFR28_02003 | | HTH-type transcriptional activator RhaR | insig. | 31 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08510 | | helix-turn-helix domain-containing protein | insig. | 31 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS31100 | | AraC family transcriptional regulator | insig. | 31 | 86 |
| | Pseudomonas putida KT2440 | PP_4602 | | Transcriptional regulator, AraC family | strong | 36 | 86 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3395 | | AraC-type DNA-binding domain-containing proteins | insig. | 31 | 92 |
| | Enterobacter sp. TBS_079 | MPMX20_03854 | | HTH-type transcriptional activator RhaS | insig. | 34 | 91 |
| | Pseudomonas segetis P6 | ACVTMO_RS12825 | | GlxA family transcriptional regulator | insig. | 32 | 85 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS08945 | | helix-turn-helix domain-containing protein | insig. | 29 | 97 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_01030 | | AraC family transcriptional regulator | insig. | 32 | 78 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19895 | | AraC family transcriptional regulator | insig. | 31 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05335 | | AraC family transcriptional regulator | insig. | 30 | 99 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3122 | | transcriptional regulator (NCBI ptt file) | sig. | 34 | 82 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS14375 | | AraC family transcriptional regulator | insig. | 33 | 92 |
| | Pseudomonas putida KT2440 | PP_2173 | | Transcriptional regulator, AraC family | sig. | 32 | 95 |
| | Enterobacter sp. TBS_079 | MPMX20_00488 | | HTH-type transcriptional activator RhaS | insig. | 31 | 88 |
| | Pseudomonas sp. RS175 | PFR28_01504 | | HTH-type transcriptional activator RhaR | insig. | 35 | 91 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS03715 | | helix-turn-helix domain-containing protein | cofit | 31 | 88 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4948 | | Transcriptional regulator, AraC family | sig. | 33 | 83 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30970 | | AraC family transcriptional regulator | no data | 32 | 84 |
| | Pseudomonas sp. DMC3 | GFF1052 | | HTH-type transcriptional activator RhaR | cofit | 36 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS22655 | | AraC family transcriptional regulator | insig. | 34 | 86 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04844 | | transcriptional regulator, AraC family | insig. | 34 | 86 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4054 | | putative transcriptional regulator (NCBI ptt file) | insig. | 34 | 86 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1906 | | transcriptional regulator (NCBI ptt file) | insig. | 34 | 91 |
| | Variovorax sp. SCN45 | GFF1929 | | Transcriptional regulator, AraC family | insig. | 34 | 87 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14910 | | helix-turn-helix domain-containing protein | insig. | 31 | 88 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23160 | | AraC family transcriptional regulator | insig. | 36 | 85 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_02244 | araC | AraC family transcriptional regulator | insig. | 36 | 85 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_00863 | | Helix-turn-helix domain-containing protein | insig. | 35 | 83 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_00865 | | Helix-turn-helix domain-containing protein | insig. | 35 | 83 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03210 | | transcriptional regulator, AraC family | strong | 33 | 86 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05939 | | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain | no data | 32 | 88 |
| | Pseudomonas sp. S08-1 | OH686_21170 | | Transcriptional regulator, AraC family | insig. | 30 | 94 |
| | Cellulophaga baltica 18 | M666_RS02185 | | two-component regulator propeller domain-containing protein | insig. | 29 | 88 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS13435 | | helix-turn-helix domain-containing protein | insig. | 29 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_21115 | | AraC family transcriptional regulator | insig. | 35 | 83 |
| | Paraburkholderia graminis OAS925 | ABIE53_005806 | | transcriptional regulator GlxA family with amidase domain | sig. | 31 | 88 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS10630 | | helix-turn-helix domain-containing protein | insig. | 31 | 88 |
| | Pseudomonas stutzeri RCH2 | Psest_1874 | | AraC-type DNA-binding domain-containing proteins | sig. | 35 | 80 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_00083 | araC | AraC family transcriptional regulator | insig. | 34 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11030 | | GlxA family transcriptional regulator | insig. | 34 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS16735 | | GlxA family transcriptional regulator | insig. | 33 | 80 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_05130 | | AraC family transcriptional regulator | insig. | 33 | 91 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_00688 | araC | AraC family transcriptional regulator | insig. | 33 | 91 |
| | Ralstonia solanacearum GMI1000 | RS_RS22710 | | AraC family transcriptional regulator | insig. | 33 | 84 |
| | Pseudomonas sp. DMC3 | GFF931 | | HTH-type transcriptional regulator CdhR | cofit | 31 | 87 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04541 | araC | AraC family transcriptional regulator | insig. | 30 | 88 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_10420 | | AraC family transcriptional regulator | insig. | 28 | 82 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05545 | | AraC family transcriptional regulator | insig. | 30 | 81 |
| | Cellulophaga baltica 18 | M666_RS09555 | | helix-turn-helix domain-containing protein | insig. | 33 | 88 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02648 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | cofit | 30 | 88 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3754 | | Signal transduction histidine kinase | insig. | 29 | 88 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04690 | araC | HTH araC/xylS-type domain-containing protein | no data | 28 | 82 |
| | Rahnella sp. WP5 | EX31_RS12055 | | helix-turn-helix domain-containing protein | insig. | 40 | 86 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1225 | | Helix-turn-helix domain | insig. | 38 | 84 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_03866 | | HTH araC/xylS-type domain-containing protein | sig. | 35 | 86 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05970 | | AraC family transcriptional regulator | insig. | 35 | 86 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_03914 | | HTH araC/xylS-type domain-containing protein | strong | 35 | 86 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3048 | | AraC-type DNA-binding domain-containing proteins | insig. | 33 | 91 |
| | Pseudomonas putida KT2440 | PP_4605 | | Transcriptional regulator, AraC family | insig. | 33 | 84 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25940 | | AraC family transcriptional regulator | insig. | 31 | 97 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2971 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 30 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_03260 | | HTH-type transcriptional regulator CdhR | insig. | 35 | 86 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2639 | | Transcriptional regulator, AraC family | insig. | 35 | 90 |
| | Paraburkholderia graminis OAS925 | ABIE53_002689 | | AraC-like DNA-binding protein | insig. | 35 | 86 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS06315 | | GlxA family transcriptional regulator | insig. | 34 | 81 |
| | Dickeya dadantii 3937 | DDA3937_RS20835 | | AraC family transcriptional regulator VfmE | strong | 33 | 85 |
| | Pseudomonas stutzeri RCH2 | Psest_0752 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | sig. | 33 | 85 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS17325 | | DNA-binding transcriptional regulator YqhC | insig. | 32 | 91 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04394 | | response regulator receiver domain protein | strong | 31 | 88 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4485 | | Transcriptional activator RamA | insig. | 30 | 88 |
| | Paraburkholderia graminis OAS925 | ABIE53_001768 | | transcriptional regulator GlxA family with amidase domain | strong | 31 | 86 |
| | Sinorhizobium meliloti 1021 | SMc03170 | | transcriptional regulator | insig. | 31 | 87 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1125 | | Transcriptional regulator, AraC family | insig. | 30 | 86 |
| | Escherichia coli ECRC62 | BNILDI_00790 | yqhC | DNA-binding transcriptional regulator YqhC | insig. | 32 | 91 |
| | Escherichia fergusonii Becca | EFB2_02430 | | Multiple antibiotic resistance protein MarA | insig. | 29 | 85 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS08735 | | MDR efflux pump AcrAB transcriptional activator MarA | insig. | 29 | 85 |