Homologs of BT1966 from Bacteroides thetaiotaomicron VPI-5482

multidrug resistance protein, AcrB/AcrD family (NCBI ptt file)
SEED: RND efflux system, inner membrane transporter CmeB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bacteroides thetaiotaomicron VPI-5482 BT1966 multidrug resistance protein, AcrB/AcrD family (NCBI ptt file) insig. 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_01389 RND transporter, HAE1 family insig. 95 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00675 efflux RND transporter permease subunit insig. 86 100
o Phocaeicola dorei CL03T12C01 ABI39_RS08280 efflux RND transporter permease subunit insig. 86 100
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01360 efflux RND transporter permease subunit insig. 60 99
  Bacteroides thetaiotaomicron VPI-5482 BT2941 multidrug resistance protein mexB (multidrug-efflux protein) (NCBI ptt file) insig. 60 100
  Bacteroides ovatus ATCC 8483 BACOVA_02874 RND transporter, HAE1 family insig. 60 100
  Bacteroides thetaiotaomicron VPI-5482 BT3338 RND efflux system for fusidic acid, chlorpromazine, and thioridazine, inner membrane component (from data) strong 55 99
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13660 efflux RND transporter permease subunit cofit 54 99
  Phocaeicola dorei CL03T12C01 ABI39_RS01285 efflux RND transporter permease subunit cofit 53 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02100 efflux RND transporter permease subunit strong 53 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23010 hydrophobe/amphiphile efflux-1 family RND transporter strong 53 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05045 hydrophobe/amphiphile efflux-1 family RND transporter strong 47 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12545 efflux RND transporter permease subunit cofit 46 99
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08425 efflux RND transporter permease subunit insig. 43 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06015 efflux RND transporter permease subunit cofit 44 98
  Phocaeicola dorei CL03T12C01 ABI39_RS18010 efflux RND transporter permease subunit insig. 44 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2781 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 43 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06875 hydrophobe/amphiphile efflux-1 family RND transporter strong 40 99
  Pseudomonas sp. S08-1 OH686_07370 RND efflux system, inner membrane transporter cofit 40 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3740 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 41 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03655 multidrug efflux RND transporter permease subunit strong 42 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08725 hydrophobe/amphiphile efflux-1 family RND transporter insig. 40 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU0061 multidrug resistance protein, putative (TIGR) strong 39 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 38 97
  Desulfovibrio vulgaris Miyazaki F DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) strong 39 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03050 efflux RND transporter permease subunit insig. 41 98
  Dechlorosoma suillum PS Dsui_1871 hydrophobe/amphiphile efflux-1 (HAE1) family transporter strong 40 97
  Sinorhizobium meliloti 1021 SMa1662 Cation/multidrug efflux pump insig. 37 97
  Shewanella loihica PV-4 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 38 97
  Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 38 97
  Alteromonas macleodii MIT1002 MIT1002_00867 Efflux pump membrane transporter BepE insig. 37 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0541 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 38 99
  Sinorhizobium meliloti 1021 SMc03971 multidrug-efflux system transmembrane protein insig. 38 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1794.1 RND efflux system, inner membrane transporter CmeB insig. 37 98
o Synechococcus elongatus PCC 7942 Synpcc7942_2369 acrF Hydrophobe/amphiphile efflux-1 HAE1 strong 38 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS02525 efflux RND transporter permease subunit strong 37 96
  Burkholderia phytofirmans PsJN BPHYT_RS16170 multidrug efflux RND transporter permease subunit no data 37 96
  Paraburkholderia graminis OAS925 ABIE53_003408 multidrug efflux pump strong 37 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02440 multidrug efflux RND transporter permease subunit insig. 38 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04170 multidrug efflux pump strong 37 96
  Ralstonia solanacearum GMI1000 RS_RS21030 multidrug efflux RND transporter permease subunit insig. 37 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS29865 efflux RND transporter permease subunit insig. 37 96
  Phocaeicola dorei CL03T12C01 ABI39_RS18725 multidrug efflux RND transporter permease subunit insig. 39 97
  Shewanella loihica PV-4 Shew_3796 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 39 97
  Phocaeicola dorei CL03T12C01 ABI39_RS01690 multidrug efflux RND transporter permease subunit insig. 37 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05160 multidrug efflux RND transporter permease subunit insig. 39 97
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 36 96
  Paraburkholderia graminis OAS925 ABIE53_005788 multidrug efflux pump insig. 37 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18285 efflux RND transporter permease subunit insig. 37 96
  Enterobacter asburiae PDN3 EX28DRAFT_3319 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 37 95
  Burkholderia phytofirmans PsJN BPHYT_RS20640 multidrug efflux RND transporter permease subunit insig. 37 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2116 RND efflux system, inner membrane transporter CmeB insig. 37 95
  Shewanella sp. ANA-3 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 36 96
  Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 36 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit insig. 36 97
  Ralstonia solanacearum UW163 UW163_RS19380 multidrug efflux RND transporter permease subunit insig. 36 97
  Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 37 97
  Shewanella oneidensis MR-1 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) strong 35 98
  Ralstonia solanacearum PSI07 RPSI07_RS03390 multidrug efflux RND transporter permease subunit insig. 36 96
  Pseudomonas syringae pv. syringae B728a Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 strong 37 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 no data 37 96
  Desulfovibrio vulgaris Miyazaki F DvMF_0036 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) insig. 36 98
  Dickeya dadantii 3937 DDA3937_RS14120 multidrug efflux RND transporter permease subunit insig. 37 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00010 multidrug efflux RND transporter permease subunit insig. 38 97
  Klebsiella michiganensis M5al BWI76_RS25585 multidrug efflux RND transporter permease subunit insig. 37 95
  Pantoea sp. MT58 IAI47_21430 multidrug efflux RND transporter permease subunit insig. 37 97
  Sinorhizobium meliloti 1021 SM_b21498 acriflavin resistance protein insig. 37 97
  Rhizobium sp. OAE497 ABIE40_RS23875 multidrug efflux RND transporter permease subunit insig. 37 98
  Cupriavidus basilensis FW507-4G11 RR42_RS32420 multidrug efflux RND transporter permease subunit insig. 36 97
  Rhizobium sp. OAE497 ABIE40_RS24225 efflux RND transporter permease subunit insig. 35 98
  Klebsiella michiganensis M5al BWI76_RS06775 multidrug efflux RND transporter permease subunit strong 37 95
  Rhizobium sp. OAE497 ABIE40_RS14935 efflux RND transporter permease subunit insig. 38 98
  Herbaspirillum seropedicae SmR1 HSERO_RS06815 multidrug transporter insig. 36 96
  Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 35 96
  Shewanella amazonensis SB2B Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) strong 35 96
  Enterobacter sp. TBS_079 MPMX20_04175 Multidrug export protein AcrF insig. 36 95
  Acinetobacter radioresistens SK82 MPMX26_00689 Multidrug resistance protein MexB strong 35 96
  Pseudomonas fluorescens FW300-N2C3 AO356_27605 transporter strong 38 97
  Escherichia coli ECOR27 NOLOHH_09440 acrF multidrug efflux RND transporter permease subunit AcrF cofit 37 95
  Escherichia coli ECRC62 BNILDI_02080 acrF multidrug efflux RND transporter permease subunit AcrF insig. 37 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00439 Multidrug export protein AcrF insig. 37 95
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07690 multidrug efflux RND transporter permease subunit insig. 36 98
  Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 36 95
  Shewanella loihica PV-4 Shew_0032 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 36 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0559 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 38 96
  Shewanella sp. ANA-3 Shewana3_1993 acriflavin resistance protein (RefSeq) cofit 38 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS03455 multidrug efflux RND transporter permease subunit insig. 37 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS09205 multidrug efflux RND transporter permease subunit no data 37 97
  Escherichia fergusonii Becca EFB2_00558 Multidrug export protein AcrF insig. 37 95
  Enterobacter asburiae PDN3 EX28DRAFT_2418 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 35 100
  Escherichia coli BL21 ECD_03124 multidrug efflux system protein insig. 37 95
  Dickeya dianthicola 67-19 HGI48_RS14120 efflux RND transporter permease subunit insig. 37 96
  Pseudomonas fluorescens FW300-N2C3 AO356_00695 multidrug transporter insig. 37 96
  Pseudomonas simiae WCS417 PS417_06770 multidrug transporter strong 36 97
  Azospirillum sp. SherDot2 MPMX19_05884 Multidrug efflux pump subunit AcrB insig. 34 97
  Pseudomonas simiae WCS417 PS417_13190 transporter insig. 37 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_222 RND efflux system, inner membrane transporter CmeB insig. 37 96
  Escherichia coli Nissle 1917 ECOLIN_RS18755 multidrug efflux RND transporter permease subunit AcrF insig. 37 95
  Escherichia coli BW25113 b3266 acrF multidrug efflux system protein (NCBI) insig. 37 95