Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0806 | | chemotaxis protein CheY, putative (TIGR) | strong | 100 | 100 |
o | Desulfovibrio vulgaris Miyazaki F | DvMF_2841 | | response regulator receiver protein (RefSeq) | strong | 67 | 91 |
o | Azospirillum sp. SherDot2 | MPMX19_01443 | | Regulator of RpoS | insig. | 35 | 90 |
| Dechlorosoma suillum PS | Dsui_2485 | | response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain | insig. | 35 | 85 |
o | Azospirillum brasilense Sp245 | AZOBR_RS17205 | | regulator | insig. | 38 | 93 |
| Azospirillum sp. SherDot2 | MPMX19_04342 | | Chemotaxis protein CheY | no data | 43 | 77 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0271 | | response regulator (TIGR) | insig. | 40 | 85 |
| Shewanella loihica PV-4 | Shew_3788 | | multi-sensor hybrid histidine kinase (RefSeq) | insig. | 35 | 89 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS17090 | | ATP-binding protein | insig. | 37 | 91 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_24215 | | chemotaxis protein CheC | insig. | 36 | 98 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS10430 | | response regulator | insig. | 37 | 78 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2030 | | Two-component response regulator PfeR, enterobactin | insig. | 35 | 92 |
| Alteromonas macleodii MIT1002 | MIT1002_04214 | | Blue-light-activated protein | insig. | 36 | 76 |
| Azospirillum sp. SherDot2 | MPMX19_05748 | | Response regulator SaeR | insig. | 35 | 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4462 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 37 | 84 |
| Bosea sp. OAE506 | ABIE41_RS13345 | | cell cycle histidine kinase CckA | no data | 35 | 85 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1307 | | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt | insig. | 39 | 79 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1307 | | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt | insig. | 39 | 79 |
| Serratia liquefaciens MT49 | IAI46_17455 | | two-component system sensor histidine kinase RcsC | cofit | 35 | 86 |
| Magnetospirillum magneticum AMB-1 | AMB_RS09450 | | response regulator | no data | 34 | 85 |
| Dickeya dianthicola 67-19 | HGI48_RS05935 | | two-component system sensor histidine kinase RcsC | insig. | 32 | 88 |
| Dickeya dianthicola ME23 | DZA65_RS06270 | | two-component system sensor histidine kinase RcsC | cofit | 32 | 88 |
| Dickeya dadantii 3937 | DDA3937_RS05890 | | two-component system sensor histidine kinase RcsC | cofit | 31 | 89 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS09000 | | response regulator | insig. | 30 | 87 |
| Azospirillum sp. SherDot2 | MPMX19_00609 | | Chemotaxis protein CheY | insig. | 43 | 78 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03615 | | hybrid sensor histidine kinase/response regulator | insig. | 44 | 58 |
| Pseudomonas simiae WCS417 | PS417_05980 | | chemotaxis protein CheA | strong | 39 | 82 |
| Phaeobacter inhibens DSM 17395 | PGA1_262p02130 | | response regulator receiver | insig. | 39 | 85 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1461 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 38 | 86 |
| Rhodospirillum rubrum S1H | Rru_A2758 | | Response regulator receiver domain protein (CheY) (NCBI) | cofit | 38 | 90 |
| Azospirillum sp. SherDot2 | MPMX19_06046 | | Sensor histidine kinase RcsC | insig. | 34 | 88 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2109 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 33 | 83 |
| Pseudomonas sp. S08-1 | OH686_14455 | | Signal transduction histidine kinase CheA | insig. | 39 | 77 |
| Agrobacterium fabrum C58 | Atu1362 | | two component sensor kinase | no data | 35 | 81 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0064 | | histidine kinase (RefSeq) | sig. | 34 | 77 |
| Pseudomonas sp. RS175 | PFR28_02095 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 34 | 90 |
| Rhizobium sp. OAE497 | ABIE40_RS10335 | | cell cycle histidine kinase CckA | no data | 35 | 81 |
| Pectobacterium carotovorum WPP14 | HER17_RS15580 | | two-component system sensor histidine kinase RcsC | cofit | 31 | 91 |
| Pseudomonas sp. S08-1 | OH686_09180 | | Two-component system sensor histidine kinase | strong | 33 | 95 |
| Dinoroseobacter shibae DFL-12 | Dshi_2708 | | PAS/PAC sensor hybrid histidine kinase (RefSeq) | sig. | 33 | 93 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF214 | | sensory box histidine kinase/response regulator | insig. | 38 | 88 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_182 | | Two-component hybrid sensor and regulator | insig. | 37 | 83 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS02085 | | response regulator transcription factor | insig. | 32 | 82 |
| Pseudomonas fluorescens SBW25 | PFLU_RS06050 | | hybrid sensor histidine kinase/response regulator | insig. | 39 | 77 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS06050 | | hybrid sensor histidine kinase/response regulator | insig. | 39 | 77 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_02730 | | transcriptional regulator | insig. | 36 | 88 |
| Magnetospirillum magneticum AMB-1 | AMB_RS17200 | | DNA-binding response regulator | cofit | 36 | 84 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_04225 | | chemotaxis protein CheA | insig. | 37 | 81 |
| Pseudomonas simiae WCS417 | PS417_11590 | | ATPase | insig. | 34 | 90 |
| Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 33 | 85 |
| Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 33 | 85 |
| Sinorhizobium meliloti 1021 | SMc00471 | | sensor histidine kinase transmembrane protein | no data | 33 | 87 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_01420 | | Histidine kinase | cofit | 34 | 88 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1223 | | anti-sigma-factor antagonist (RefSeq) | sig. | 35 | 88 |
| Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 33 | 85 |
| Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 33 | 85 |
| Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 33 | 85 |
| Escherichia coli ECRC101 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 33 | 85 |
| Escherichia coli ECRC101 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 33 | 85 |
| Escherichia coli ECRC102 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 33 | 85 |
| Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 33 | 85 |
| Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 33 | 85 |
| Escherichia coli ECRC99 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 33 | 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 33 | 85 |
| Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 33 | 85 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_06255 | | chemotaxis protein CheA | insig. | 37 | 77 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3119 | | Sensor histidine kinase/response regulator | insig. | 37 | 77 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3611 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 33 | 82 |
| Erwinia tracheiphila SCR3 | LU632_RS08170 | rcsC | two-component system sensor histidine kinase RcsC | strong | 32 | 88 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4753 | | Sensor histidine kinase/response regulator | insig. | 37 | 77 |
| Sinorhizobium meliloti 1021 | SM_b21561 | | two component response regulator protein | insig. | 38 | 86 |
| Azospirillum sp. SherDot2 | MPMX19_02735 | | Sensor histidine kinase RcsC | insig. | 35 | 85 |
| Serratia liquefaciens MT49 | IAI46_14250 | | two-component system response regulator RssB | insig. | 33 | 86 |
| Caulobacter crescentus NA1000 | CCNA_00625 | | two-component receiver domain protein | cofit | 32 | 85 |
| Caulobacter crescentus NA1000 Δfur | CCNA_00625 | | two-component receiver domain protein | cofit | 32 | 85 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS01350 | | transcriptional regulator | insig. | 32 | 87 |
| Pseudomonas syringae pv. syringae B728a | Psyr_0886 | | Response regulator receiver | insig. | 31 | 91 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0886 | | Response regulator receiver | insig. | 31 | 91 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0732 | | two-component system response regulator (NCBI ptt file) | no data | 30 | 77 |
o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS05150 | | response regulator | no data | 34 | 85 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0408 | | response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) | sig. | 32 | 87 |
| Shewanella loihica PV-4 | Shew_1936 | | two component transcriptional regulator (RefSeq) | no data | 39 | 90 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1563 | | sensory box histidine kinase/response regulator (TIGR) | insig. | 36 | 87 |
| Enterobacter sp. TBS_079 | MPMX20_03423 | | Transcriptional regulatory protein QseF | sig. | 33 | 98 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2416 | srrA | two component transcriptional regulator, winged helix family | sig. | 33 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30910 | | histidine kinase | insig. | 32 | 82 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS09720 | | hypothetical protein | insig. | 32 | 79 |
| Magnetospirillum magneticum AMB-1 | AMB_RS09915 | | hybrid sensor histidine kinase/response regulator | insig. | 30 | 86 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_05345 | | two-component system response regulator | insig. | 28 | 98 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3037 | | Sensor histidine kinase/response regulator | insig. | 36 | 77 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0581 | | response regulator/anti-anti-sigma factor (TIGR) | cofit | 33 | 95 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS16930 | | chemotaxis protein CheY | insig. | 33 | 82 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0449 | | sensor/response regulator (TIGR) | insig. | 31 | 90 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS10065 | | hybrid sensor histidine kinase/response regulator | insig. | 37 | 77 |
| Pseudomonas sp. RS175 | PFR28_00355 | | Sensor histidine kinase RcsC | insig. | 37 | 77 |
| Pseudomonas putida KT2440 | PP_1492 | | Sensor histidine kinase/response regulator | sig. | 36 | 77 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0096 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | sig. | 33 | 97 |
| Acinetobacter radioresistens SK82 | MPMX26_01710 | | Transcriptional activator protein CzcR | no data | 32 | 81 |
| Alteromonas macleodii MIT1002 | MIT1002_02557 | | Sensor kinase protein RcsC | cofit | 31 | 78 |
| Azospirillum sp. SherDot2 | MPMX19_05080 | | Sensor histidine kinase RcsC | insig. | 35 | 79 |