Homologs of SO2627 from Shewanella oneidensis MR-1

conserved hypothetical protein (NCBI ptt file)
SEED: ATP-dependent Clp protease adaptor protein ClpS
KEGG: ATP-dependent Clp protease adaptor protein ClpS

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO2627 conserved hypothetical protein (NCBI ptt file) cofit 100 100
o Shewanella sp. ANA-3 Shewana3_1752 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) no data 99 100
o Shewanella loihica PV-4 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) no data 91 100
o Shewanella amazonensis SB2B Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) strong 81 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_20180 clpS ATP-dependent Clp protease adapter ClpS cofit 60 100
o Erwinia tracheiphila SCR3 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS cofit 60 100
o Erwinia amylovora T8 OLJFJH_16220 ATP-dependent Clp protease adapter ClpS sig. 61 100
o Dickeya dianthicola 67-19 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS insig. 65 91
o Dickeya dianthicola ME23 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS insig. 65 91
o Serratia liquefaciens MT49 IAI46_08510 ATP-dependent Clp protease adapter ClpS cofit 63 95
o Escherichia coli BL21 ECD_00886 regulatory protein for ClpA substrate specificity insig. 59 100
o Escherichia fergusonii Becca EFB2_03180 ATP-dependent Clp protease adapter protein ClpS insig. 59 100
o Escherichia coli ECOR27 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS insig. 59 100
o Escherichia coli ECOR38 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS insig. 59 100
o Escherichia coli ECRC100 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS insig. 59 100
o Escherichia coli ECRC101 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS insig. 59 100
o Escherichia coli ECRC102 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS insig. 59 100
o Escherichia coli ECRC62 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS cofit 59 100
o Escherichia coli ECRC98 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS insig. 59 100
o Escherichia coli ECRC99 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS no data 59 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS insig. 59 100
o Escherichia coli Nissle 1917 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS insig. 59 100
o Escherichia coli BW25113 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) insig. 59 100
o Klebsiella michiganensis M5al BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS strong 66 91
o Pectobacterium carotovorum WPP14 HER17_RS12405 ATP-dependent Clp protease adapter ClpS insig. 63 89
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4902 ATP-dependent Clp protease adaptor protein ClpS insig. 59 100
o Enterobacter asburiae PDN3 EX28DRAFT_2051 Uncharacterized conserved protein cofit 58 100
o Enterobacter sp. TBS_079 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS insig. 58 100
o Klebsiella pneumoniae MKP103 KDGMDA_17855 ATP-dependent Clp protease adapter ClpS insig. 61 95
o Pantoea sp. MT58 IAI47_12950 ATP-dependent Clp protease adapter ClpS cofit 61 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04380 ATP-dependent Clp protease adapter ClpS cofit 61 95
o Dickeya dadantii 3937 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS cofit 67 83
o Rahnella sp. WP5 EX31_RS18565 ATP-dependent Clp protease adapter ClpS insig. 58 95
  Alteromonas macleodii MIT1002 MIT1002_01833 ATP-dependent Clp protease adapter protein ClpS insig. 66 81
  Pseudomonas aeruginosa MRSN321 DY961_RS04115 clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES ATP-dependent Clp protease adapter ClpS strong 63 82
  Pseudomonas aeruginosa PA14 IKLFDK_13155 ATP-dependent Clp protease adapter ClpS strong 63 82
  Pseudomonas aeruginosa PUPa3 DQ20_RS35140 clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES ATP-dependent Clp protease adapter ClpS strong 63 82
o Vibrio cholerae E7946 ATCC 55056 CSW01_05800 ATP-dependent Clp protease adaptor ClpS insig. 56 89
  Pseudomonas sp. BP01 JOY50_RS06560 clpS ATP-dependent Clp protease adapter ClpS insig. 63 82
  Pseudomonas putida KT2440 PP_4009 ATP-dependent Clp protease adapter protein ClpS strong 63 82
  Kangiella aquimarina DSM 16071 B158DRAFT_1504 Uncharacterized conserved protein strong 60 85
  Sphingobium sp. HT1-2 GFF643 ATP-dependent Clp protease adaptor protein ClpS cofit 59 91
  Pseudomonas fluorescens FW300-N2E3 AO353_27680 ATP-dependent Clp protease adaptor ClpS strong 61 82
  Pseudomonas fluorescens FW300-N2C3 AO356_22145 ATP-dependent Clp protease adaptor ClpS strong 61 82
  Pseudomonas fluorescens SBW25 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS strong 61 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18555 ATP-dependent Clp protease adapter ClpS strong 61 82
  Pseudomonas sp. SVBP6 COO64_RS24205 clpS ATP-dependent Clp protease adapter ClpS insig. 61 82
  Pseudomonas orientalis W4I3 QF045_RS18270 ATP-dependent Clp protease adapter ClpS insig. 61 82
  Pseudomonas syringae pv. syringae B728a Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS sig. 61 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS insig. 61 82
  Pseudomonas simiae WCS417 PS417_16515 Clp protease ClpS strong 61 82
o Azospirillum sp. SherDot2 MPMX19_00504 ATP-dependent Clp protease adapter protein ClpS insig. 55 98
  Pseudomonas sp. S08-1 OH686_00230 ATP-dependent Clp protease adaptor protein ClpS cofit 61 82
o Dechlorosoma suillum PS Dsui_0008 hypothetical protein cofit 59 88
  Pseudomonas sp. DMC3 GFF1524 ATP-dependent Clp protease adapter protein ClpS insig. 62 77
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03630 ATP-dependent Clp protease adapter protein ClpS cofit 62 77
  Pseudomonas sp. RS175 PFR28_02614 ATP-dependent Clp protease adapter protein ClpS strong 62 77
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2645 ATP-dependent Clp protease adaptor protein ClpS sig. 62 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4054 ATP-dependent Clp protease adaptor protein ClpS strong 62 77
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_291 ATP-dependent Clp protease adaptor protein ClpS strong 62 77
  Pseudomonas segetis P6 ACVTMO_RS12620 clpS ATP-dependent Clp protease adapter ClpS strong 60 82
o Lysobacter sp. OAE881 ABIE51_RS11495 ATP-dependent Clp protease adapter ClpS strong 59 84
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2755.1 ATP-dependent Clp protease adaptor protein ClpS insig. 54 91
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1285 Uncharacterized conserved protein strong 54 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS strong 57 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS strong 57 91
o Ralstonia solanacearum PSI07 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS strong 57 91
o Ralstonia solanacearum UW163 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS insig. 57 91
o Azospirillum brasilense Sp245 AZOBR_RS05180 Clp protease ClpS insig. 63 78
o Ralstonia solanacearum GMI1000 RS_RS12375 ATP-dependent Clp protease adaptor ClpS strong 56 91
  Magnetospirillum magneticum AMB-1 AMB_RS05700 ATP-dependent Clp protease adapter ClpS cofit 59 79
  Sinorhizobium meliloti 1021 SMc02110 ATP-dependent Clp protease adaptor protein ClpS no data 57 87
  Xanthobacter sp. DMC5 GFF1011 ATP-dependent Clp protease adapter protein ClpS insig. 56 87
  Pseudomonas stutzeri RCH2 Psest_2026 Uncharacterized conserved protein strong 52 88
  Rhodospirillum rubrum S1H Rru_A2110 ATP-dependent Clp protease adaptor protein ClpS (NCBI) cofit 58 79
o Cupriavidus basilensis FW507-4G11 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS sig. 55 91
  Acinetobacter radioresistens SK82 MPMX26_01283 ATP-dependent Clp protease adapter protein ClpS strong 58 82
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS02195 ATP-dependent Clp protease adapter ClpS strong 51 88
o Burkholderia phytofirmans PsJN BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS sig. 54 91
o Herbaspirillum seropedicae SmR1 HSERO_RS07025 ATP-dependent Clp protease ClpS strong 55 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS sig. 53 91
o Paraburkholderia graminis OAS925 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS strong 53 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00425 ATP-dependent Clp protease adapter ClpS strong 49 88
o Rhodanobacter sp. FW510-T8 OKGIIK_06885 clpS ATP-dependent Clp protease adapter ClpS sig. 49 88
o Agrobacterium fabrum C58 Atu1363 ATP-dependent Clp protease adaptor protein ClpS no data 55 87
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS09725 ATP-dependent Clp protease adapter ClpS sig. 49 88
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08395 ATP-dependent Clp protease adapter ClpS cofit 54 83
o Rhodanobacter denitrificans MT42 LRK55_RS00165 ATP-dependent Clp protease adapter ClpS strong 49 88
  Acinetobacter baumannii LAC-4 RR41_RS13900 ATP-dependent Clp protease adapter ClpS insig. 54 91
  Rhizobium sp. OAE497 ABIE40_RS08860 ATP-dependent Clp protease adapter ClpS sig. 54 87
o Paraburkholderia sabiae LMG 24235 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS strong 53 91
o Caulobacter crescentus NA1000 CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS strong 51 86
o Caulobacter crescentus NA1000 Δfur CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS cofit 51 86
  Rhodopseudomonas palustris CGA009 TX73_016275 ATP-dependent Clp protease adapter ClpS strong 56 79
o Methylophilus sp. DMC18 GFF1739 ATP-dependent Clp protease adapter protein ClpS insig. 54 81
  Marinobacter adhaerens HP15 HP15_2081 ATP-dependent Clp protease adaptor protein ClpS sig. 56 75
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4520 ATP-dependent Clp protease adaptor protein ClpS cofit 53 86
  Castellaniella sp019104865 MT123 ABCV34_RS05310 ATP-dependent Clp protease adapter ClpS insig. 52 83
  Variovorax sp. SCN45 GFF342 ATP-dependent Clp protease adaptor protein ClpS cofit 52 89
o Acidovorax sp. GW101-3H11 Ac3H11_2457 ATP-dependent Clp protease adaptor protein ClpS insig. 53 89