Homologs of SO0034 from Shewanella oneidensis MR-1

DNA processing protein DprA, putative (NCBI ptt file)
SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
KEGG: DNA processing protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0034 DNA processing protein DprA, putative (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_0037 DNA protecting protein DprA (RefSeq) insig. 94 100
o Shewanella loihica PV-4 Shew_3734 DNA protecting protein DprA (RefSeq) insig. 67 100
o Shewanella amazonensis SB2B Sama_0045 DNA processing protein DprA, putative (RefSeq) insig. 65 100
o Pectobacterium carotovorum WPP14 HER17_RS02230 DNA-protecting protein DprA insig. 45 99
o Alteromonas macleodii MIT1002 MIT1002_00022 DNA protecting protein DprA insig. 44 90
o Kangiella aquimarina DSM 16071 B158DRAFT_0400 DNA protecting protein DprA insig. 46 90
o Dickeya dadantii 3937 DDA3937_RS19120 DNA-protecting protein DprA insig. 44 96
o Enterobacter asburiae PDN3 EX28DRAFT_0042 DNA protecting protein DprA insig. 47 91
o Dickeya dianthicola ME23 DZA65_RS20335 DNA-protecting protein DprA insig. 45 88
o Vibrio cholerae E7946 ATCC 55056 CSW01_00245 DNA-protecting protein DprA insig. 48 91
o Dickeya dianthicola 67-19 HGI48_RS19210 DNA-protecting protein DprA insig. 45 88
o Klebsiella michiganensis M5al BWI76_RS25665 DNA-processing protein DprA insig. 44 93
o Rahnella sp. WP5 EX31_RS15970 DNA-protecting protein DprA cofit 42 94
o Escherichia coli ECOR27 NOLOHH_09335 dprA DNA-protecting protein DprA insig. 46 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 45 90
o Escherichia coli BL21 ECD_03136 DNA recombination-mediator A family protein insig. 46 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00418 hypothetical protein insig. 46 92
o Escherichia coli BW25113 b4473 smf hypothetical protein (NCBI) insig. 46 92
o Escherichia coli ECRC101 MCAODC_08065 dprA DNA-protecting protein DprA insig. 45 92
o Escherichia fergusonii Becca EFB2_00538 hypothetical protein insig. 45 92
o Escherichia coli ECRC102 NIAGMN_15305 dprA DNA-protecting protein DprA insig. 45 92
o Escherichia coli ECRC98 JDDGAC_21165 dprA DNA-protecting protein DprA insig. 45 92
o Escherichia coli ECRC99 KEDOAH_10605 dprA DNA-protecting protein DprA no data 45 92
o Escherichia coli ECOR38 HEPCGN_16365 dprA DNA-protecting protein DprA insig. 45 92
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12485 dprA DNA-protecting protein DprA cofit 44 90
o Pantoea sp. MT58 IAI47_02295 DNA-protecting protein DprA insig. 43 91
o Escherichia coli ECRC62 BNILDI_02185 dprA DNA-protecting protein DprA cofit 46 92
o Escherichia coli Nissle 1917 ECOLIN_RS18860 DNA-protecting protein DprA insig. 45 92
o Enterobacter sp. TBS_079 MPMX20_04193 hypothetical protein insig. 46 86
o Erwinia tracheiphila SCR3 LU632_RS22465 dprA DNA-protecting protein DprA insig. 44 90
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13870 DNA-processing protein DprA insig. 47 84
o Klebsiella pneumoniae MKP103 KDGMDA_06535 DNA-protecting protein DprA insig. 44 92
o Erwinia amylovora T8 OLJFJH_03705 DNA-protecting protein DprA insig. 43 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 45 89
o Dechlorosoma suillum PS Dsui_0819 DNA protecting protein DprA cofit 44 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22540 DNA-protecting protein DprA insig. 43 88
o Serratia liquefaciens MT49 IAI46_23260 DNA-protecting protein DprA insig. 43 91
o Rhodanobacter sp. FW510-T8 OKGIIK_13770 dprA DNA-processing protein DprA insig. 44 90
o Rhodanobacter denitrificans MT42 LRK55_RS09785 DNA-processing protein DprA insig. 43 89
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10145 DNA-processing protein DprA sig. 43 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS00150 DNA-processing protein DprA insig. 42 91
o Pseudomonas stutzeri RCH2 Psest_0025 DNA protecting protein DprA sig. 45 91
  Herbaspirillum seropedicae SmR1 HSERO_RS23400 DNA processing protein DprA insig. 45 81
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00227 hypothetical protein insig. 45 88
o Methylophilus sp. DMC18 GFF1494 hypothetical protein insig. 45 88
  Pseudomonas orientalis W4I3 QF045_RS03040 DNA-processing protein DprA insig. 46 88
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02925 DNA-processing protein DprA insig. 42 96
  Pseudomonas sp. SVBP6 COO64_RS02230 dprA DNA-processing protein DprA insig. 48 86
o Variovorax sp. OAS795 ABID97_RS01830 DNA-processing protein DprA insig. 42 88
  Pseudomonas fluorescens SBW25 PFLU_RS00100 DNA-protecting protein DprA cofit 46 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00100 DNA-protecting protein DprA insig. 46 88
  Pseudomonas sp. RS175 PFR28_04659 hypothetical protein insig. 46 86
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 42 90
  Cupriavidus basilensis FW507-4G11 RR42_RS20480 DNA processing protein DprA insig. 41 90
o Castellaniella sp019104865 MT123 ABCV34_RS14195 DNA-processing protein DprA insig. 42 89
  Pseudomonas aeruginosa MRSN321 DY961_RS26305 dprA;go_process=DNA-mediated DNA-processing protein DprA insig. 45 88
  Pseudomonas aeruginosa PUPa3 DQ20_RS58710 dprA;go_process=DNA-mediated DNA-processing protein DprA insig. 45 88
  Pseudomonas fluorescens FW300-N2C3 AO356_11295 DNA processing protein DprA insig. 46 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4125 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 46 85
  Pseudomonas putida KT2440 PP_0069 putative Rossmann fold nucleotide-binding protein sig. 45 86
  Pseudomonas aeruginosa PA14 IKLFDK_25455 DNA-processing protein DprA insig. 45 88
o Lysobacter sp. OAE881 ABIE51_RS02235 DNA-processing protein DprA insig. 43 89
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02242 DNA protecting protein DprA insig. 48 67
  Pseudomonas sp. BP01 JOY50_RS08235 dprA DNA-processing protein DprA insig. 45 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_648 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 45 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09755 DNA-protecting protein DprA insig. 39 88
  Ralstonia solanacearum UW163 UW163_RS03825 DNA-protecting protein DprA insig. 39 88
  Pseudomonas fluorescens FW300-N2E3 AO353_10650 DNA processing protein DprA insig. 44 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS04985 DNA-processing protein DprA insig. 42 84
  Pseudomonas sp. S08-1 OH686_12505 DNA protecting protein DprA insig. 54 67
  Pseudomonas syringae pv. syringae B728a Psyr_0021 DNA protecting protein DprA insig. 45 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0021 DNA protecting protein DprA insig. 45 86
o Pseudomonas segetis P6 ACVTMO_RS01365 dprA DNA-processing protein DprA insig. 43 91
  Acinetobacter radioresistens SK82 MPMX26_00114 hypothetical protein insig. 42 84
  Ralstonia solanacearum PSI07 RPSI07_RS23610 DNA-protecting protein DprA cofit 38 88
  Pseudomonas sp. DMC3 GFF594 hypothetical protein cofit 44 88
  Acinetobacter baumannii LAC-4 RR41_RS18085 DNA-processing protein DprA insig. 43 87
  Burkholderia phytofirmans PsJN BPHYT_RS01450 DNA-binding protein insig. 47 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1910 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 43 89
  Ralstonia solanacearum GMI1000 RS_RS00340 DNA-protecting protein DprA insig. 41 84
o Paraburkholderia graminis OAS925 ABIE53_000387 DNA processing protein insig. 47 67
  Acidovorax sp. GW101-3H11 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 43 86
o Variovorax sp. SCN45 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 40 88
  Marinobacter adhaerens HP15 HP15_3746 DNA protecting protein DprA insig. 42 85
  Caulobacter crescentus NA1000 CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 49 70
  Caulobacter crescentus NA1000 Δfur CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 49 70
o Fusobacterium nucleatum SB010 HUW76_06810 DNA-protecting protein DprA strong 35 85
  Azospirillum brasilense Sp245 AZOBR_RS15885 DNA processing protein DprA insig. 42 85
  Desulfovibrio vulgaris Miyazaki F DvMF_0771 DNA protecting protein DprA (RefSeq) insig. 45 66
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04240 DNA-processing protein DprA insig. 42 86
  Rhodopseudomonas palustris CGA009 TX73_016135 DNA-processing protein DprA insig. 44 82
o Azospirillum sp. SherDot2 MPMX19_01508 hypothetical protein insig. 40 88
o Sphingobium sp. HT1-2 GFF113 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake cofit 40 82
  Escherichia coli ECRC100 OKFHMN_17535 dprA DNA-protecting protein DprA insig. 47 68
o Magnetospirillum magneticum AMB-1 AMB_RS03500 DNA-protecting protein DprA cofit 39 89
  Rhizobium sp. OAE497 ABIE40_RS07365 DNA-processing protein DprA insig. 41 85
  Sinorhizobium meliloti 1021 SMc01363 hypothetical protein insig. 40 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU2069 dprA DNA processing protein DprA, putative (TIGR) insig. 48 67
  Agrobacterium fabrum C58 Atu1305 DNA processing chain A insig. 40 85