| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.4046.1 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 1.0 | Xcc-8004.4199.1 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | 0.58 | 11 |
| Lysobacter sp. OAE881 | 0.82 | ABIE51_RS14145 | | endopeptidase La | 0.16 | ABIE51_RS16505 | | branched-chain amino acid transaminase | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.74 | ABZR86_RS07320 | | endopeptidase La | 0.14 | ABZR86_RS11580 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.73 | OKGIIK_08030 | lon | endopeptidase La | 0.16 | OKGIIK_11840 | ilvE | branched-chain amino acid transaminase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.73 | LRK54_RS16735 | | endopeptidase La | 0.16 | LRK54_RS12020 | | branched-chain amino acid transaminase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.73 | LRK55_RS16460 | | endopeptidase La | 0.16 | LRK55_RS11755 | | branched-chain amino acid transaminase | low | > 63 |
| Shewanella loihica PV-4 | 0.66 | Shew_2506 | | ATP-dependent protease La (RefSeq) | 0.33 | Shew_0278 | | branched-chain amino acid aminotransferase (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.65 | Shewana3_2659 | | Lon-A peptidase (RefSeq) | 0.33 | Shewana3_3830 | | branched-chain amino acid aminotransferase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.65 | SO1796 | lon | ATP-dependent protease La (NCBI ptt file) | 0.33 | SO0340 | ilvE | branched-chain amino acid aminotransferase (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.65 | Sama_1226 | | endopeptidase La (RefSeq) | 0.34 | Sama_3299 | | branched-chain amino acid aminotransferase (RefSeq) | low | > 62 |
| Pseudomonas fluorescens FW300-N2C3 | 0.65 | AO356_01740 | | DNA-binding protein | 0.31 | AO356_22970 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.65 | Psest_2285 | | ATP-dependent protease La | 0.17 | Psest_0450 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) | low | > 67 |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS08655 | | endopeptidase La | 0.51 | RS_RS23675 | | branched-chain amino acid aminotransferase | — | — |
| Ralstonia solanacearum PSI07 | 0.65 | RPSI07_RS16135 | | endopeptidase La | 0.16 | RPSI07_RS21175 | | branched-chain amino acid transaminase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.65 | Pf6N2E2_2216 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.30 | Pf6N2E2_477 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.65 | RALBFv3_RS01340 | | endopeptidase La | 0.51 | RALBFv3_RS16875 | | branched-chain amino acid aminotransferase | — | — |
| Ralstonia solanacearum UW163 | 0.65 | UW163_RS14650 | | endopeptidase La | 0.51 | UW163_RS18230 | | branched-chain amino acid aminotransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.64 | ABZR87_RS12785 | | endopeptidase La | 0.54 | ABZR87_RS18540 | | branched-chain amino acid aminotransferase | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.64 | AO353_20185 | | DNA-binding protein | 0.31 | AO353_26655 | | branched-chain amino acid aminotransferase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_3947 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.31 | Pf1N1B4_4476 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | — | — |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS05650 | | endopeptidase La | 0.17 | DDA3937_RS20160 | | branched-chain-amino-acid transaminase | low | > 74 |
| Pseudomonas fluorescens GW456-L13 | 0.64 | PfGW456L13_2554 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.30 | PfGW456L13_3544 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 87 |
| Klebsiella michiganensis M5al | 0.64 | BWI76_RS06535 | | endopeptidase La | 0.18 | BWI76_RS00970 | | branched chain amino acid aminotransferase | low | > 92 |
| Pseudomonas fluorescens SBW25 | 0.64 | PFLU_RS19160 | | endopeptidase La | 0.31 | PFLU_RS19375 | | branched-chain amino acid aminotransferase | low | > 109 |
| Pseudomonas sp. RS175 | 0.64 | PFR28_01230 | | Lon protease | 0.30 | PFR28_02449 | | putative branched-chain-amino-acid aminotransferase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.64 | PFLU_RS19160 | | endopeptidase La | 0.31 | PFLU_RS19375 | | branched-chain amino acid aminotransferase | 0.30 | 73 |
| Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS15840 | | endopeptidase La | 0.17 | HER17_RS01070 | | branched-chain amino acid transaminase | — | — |
| Pseudomonas simiae WCS417 | 0.64 | PS417_17225 | | DNA-binding protein | 0.32 | PS417_17565 | | branched-chain amino acid aminotransferase | — | — |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS05695 | | endopeptidase La | 0.17 | HGI48_RS20300 | | branched-chain-amino-acid transaminase | low | > 71 |
| Dickeya dianthicola ME23 | 0.64 | DZA65_RS06020 | | endopeptidase La | 0.17 | DZA65_RS21340 | | branched-chain amino acid transaminase | low | > 75 |
| Alteromonas macleodii MIT1002 | 0.64 | MIT1002_02757 | | Lon protease | 0.29 | MIT1002_00377 | | Branched-chain-amino-acid aminotransferase 2 | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_09605 | | endopeptidase La | 0.15 | CSW01_00145 | | branched-chain-amino-acid transaminase | low | > 62 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.64 | Psyr_1749 | | ATP-dependent proteinase, Serine peptidase, MEROPS family S16 | 0.31 | Psyr_1148 | | branched chain amino acid aminotransferase apoenzyme | 0.33 | 80 |
| Dechlorosoma suillum PS | 0.64 | Dsui_2198 | | ATP-dependent protease La | 0.17 | Dsui_3339 | | branched-chain amino acid aminotransferase, group I | low | > 51 |
| Pseudomonas syringae pv. syringae B728a | 0.64 | Psyr_1749 | | ATP-dependent proteinase, Serine peptidase, MEROPS family S16 | 0.31 | Psyr_1148 | | branched chain amino acid aminotransferase apoenzyme | low | > 86 |
| Pantoea sp. MT58 | 0.64 | IAI47_14645 | | endopeptidase La | 0.16 | IAI47_01030 | | branched-chain amino acid transaminase | — | — |
| Pseudomonas sp. S08-1 | 0.64 | OH686_03635 | | endopeptidase La | 0.16 | OH686_09695 | | branched-chain amino acid aminotransferase | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS12905 | | peptidase | 0.18 | HSERO_RS03330 | | branched-chain amino acid aminotransferase | — | — |
| Enterobacter sp. TBS_079 | 0.64 | MPMX20_01030 | | Lon protease | 0.17 | MPMX20_04500 | | Branched-chain-amino-acid aminotransferase | low | > 85 |
| Escherichia coli ECRC62 | 0.64 | BNILDI_22670 | lon_P403L | Lon protease | 0.17 | BNILDI_04745 | ilvE | branched-chain-amino-acid transaminase | low | > 75 |
| Escherichia coli BW25113 | 0.64 | b0439 | lon | DNA-binding ATP-dependent protease La (NCBI) | 0.17 | b3770 | ilvE | branched-chain amino acid aminotransferase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_01255 | lon_P403L | Lon protease | 0.17 | NOLOHH_06780 | ilvE | branched-chain-amino-acid transaminase | 0.67 | 47 |
| Pseudomonas putida KT2440 | 0.64 | PP_2302 | | DNA-binding, ATP-dependent protease | 0.32 | PP_3511 | | Branched-chain-amino-acid aminotransferase | low | > 96 |
| Enterobacter asburiae PDN3 | 0.64 | EX28DRAFT_2531 | | endopeptidase La | 0.17 | EX28DRAFT_4442 | | branched-chain amino acid aminotransferase, group I | low | > 76 |
| Escherichia coli ECOR38 | 0.64 | HEPCGN_06935 | lon_P403L | Lon protease | 0.17 | HEPCGN_13355 | ilvE | branched-chain-amino-acid transaminase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.64 | OHPLBJKB_03234 | | Lon protease | 0.17 | OHPLBJKB_04283 | | Branched-chain-amino-acid aminotransferase | low | > 73 |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS02635 | | endopeptidase La | 0.17 | ECOLIN_RS21660 | | branched-chain-amino-acid transaminase | low | > 55 |
| Escherichia coli BL21 | 0.64 | ECD_00391 | | DNA-binding ATP-dependent protease La | 0.17 | ECD_03648 | | branched-chain amino acid aminotransferase | low | > 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.64 | GFF4355 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.17 | GFF2902 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 78 |
| Escherichia fergusonii Becca | 0.64 | EFB2_03618 | | Lon protease | 0.17 | EFB2_04866 | | Branched-chain-amino-acid aminotransferase | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS18335 | lon | endopeptidase La | 0.16 | LU632_RS24405 | | branched-chain amino acid transaminase | — | — |
| Serratia liquefaciens MT49 | 0.64 | IAI46_05020 | | endopeptidase La | 0.17 | IAI46_24350 | | branched-chain-amino-acid transaminase | low | > 86 |
| Escherichia coli ECRC99 | 0.63 | KEDOAH_19645 | | Lon protease | 0.17 | KEDOAH_13505 | ilvE | branched-chain-amino-acid transaminase | — | — |
| Escherichia coli ECRC102 | 0.63 | NIAGMN_06375 | | Lon protease | 0.17 | NIAGMN_12400 | ilvE | branched-chain-amino-acid transaminase | — | — |
| Escherichia coli ECRC100 | 0.63 | OKFHMN_08320 | | Lon protease | 0.17 | OKFHMN_14645 | ilvE | branched-chain-amino-acid transaminase | low | > 80 |
| Escherichia coli ECRC101 | 0.63 | MCAODC_27545 | | Lon protease | 0.17 | MCAODC_05150 | ilvE | branched-chain-amino-acid transaminase | low | > 87 |
| Escherichia coli ECRC98 | 0.63 | JDDGAC_11975 | | Lon protease | 0.17 | JDDGAC_18265 | ilvE | branched-chain-amino-acid transaminase | low | > 86 |
| Marinobacter adhaerens HP15 | 0.63 | HP15_2183 | | DNA-binding ATP-dependent protease La | 0.16 | HP15_436 | | branched-chain-amino-acid aminotransferase | — | — |
| Rahnella sp. WP5 | 0.63 | EX31_RS22255 | | endopeptidase La | 0.16 | EX31_RS15000 | | branched-chain amino acid transaminase | low | > 89 |
| Paraburkholderia sabiae LMG 24235 | 0.63 | QEN71_RS21975 | | endopeptidase La | 0.18 | QEN71_RS02410 | | branched-chain amino acid transaminase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.63 | BPHYT_RS09460 | | peptidase | 0.19 | BPHYT_RS16285 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.63 | RR42_RS09030 | | DNA-binding protein | 0.50 | RR42_RS25890 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.63 | H281DRAFT_00898 | | ATP-dependent proteinase. Serine peptidase. MEROPS family S16 | 0.19 | H281DRAFT_04193 | | branched chain amino acid aminotransferase apoenzyme | — | — |
| Acidovorax sp. GW101-3H11 | 0.62 | Ac3H11_937 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.16 | Ac3H11_3369 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.61 | GFF4044 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.17 | GFF1835 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | 0.63 | 48 |
| Variovorax sp. OAS795 | 0.61 | ABID97_RS17590 | | endopeptidase La | 0.16 | ABID97_RS03790 | | branched-chain amino acid transaminase | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.61 | ABCV34_RS05125 | | endopeptidase La | 0.14 | ABCV34_RS07930 | | branched-chain amino acid transaminase | — | — |
| Paraburkholderia graminis OAS925 | 0.61 | ABIE53_002117 | | ATP-dependent Lon protease | 0.19 | ABIE53_003432 | | branched-chain amino acid aminotransferase | low | > 113 |
| Rhodospirillum rubrum S1H | 0.61 | Rru_A1552 | | Peptidase S16, ATP-dependent protease La (NCBI) | 0.12 | Rru_A2223 | | Branched-chain amino acid aminotransferase I (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.60 | AMB_RS14035 | | endopeptidase La | 0.11 | AMB_RS02850 | | branched-chain amino acid aminotransferase | — | — |
| Variovorax sp. SCN45 | 0.60 | GFF487 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.16 | GFF5079 | | Branched-chain amino acid aminotransferase (EC 2.6.1.42) | low | > 127 |
| Agrobacterium fabrum C58 | 0.59 | Atu1261 | | ATP-dependent protease LA | 0.08 | Atu0871 | | branched-chain-amino-acid aminotransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.59 | TX73_015345 | | endopeptidase La | 0.47 | TX73_022650 | | branched-chain amino acid aminotransferase | — | — |
| Sinorhizobium meliloti 1021 | 0.58 | SMc01905 | | ATP-dependent protease LA protein | 0.50 | SMc02896 | | branched-chain amino acid aminotransferase | — | — |
| Rhizobium sp. OAE497 | 0.58 | ABIE40_RS07100 | | endopeptidase La | 0.46 | ABIE40_RS11350 | | branched-chain amino acid aminotransferase | — | — |
| Bosea sp. OAE506 | 0.58 | ABIE41_RS18050 | | endopeptidase La | 0.11 | ABIE41_RS11405 | | branched-chain amino acid aminotransferase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.56 | Ga0059261_0102 | | endopeptidase La | 0.54 | Ga0059261_3811 | | branched-chain amino acid aminotransferase, group II | low | > 68 |
| Desulfovibrio vulgaris Miyazaki F | 0.53 | DvMF_0112 | | ATP-dependent protease La (RefSeq) | 0.16 | DvMF_2268 | | branched-chain amino acid aminotransferase (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.52 | DVU1337 | lon | ATP-dependent protease La (TIGR) | 0.17 | DVU3197 | ilvE | branched-chain amino acid aminotransferase (TIGR) | low | > 55 |
| Acinetobacter radioresistens SK82 | 0.51 | MPMX26_02299 | | Lon protease | 0.16 | MPMX26_00445 | | Branched-chain-amino-acid aminotransferase | low | > 36 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.43 | CA264_00045 | | endopeptidase La | 0.36 | CA264_00175 | | branched chain amino acid aminotransferase | low | > 74 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.42 | ABZR88_RS15670 | | endopeptidase La | 0.40 | ABZR88_RS22095 | | branched-chain amino acid aminotransferase | — | — |
| Bacteroides stercoris CC31F | 0.41 | HMPREF1181_RS14340 | | endopeptidase La | 0.30 | HMPREF1181_RS06865 | | branched-chain amino acid aminotransferase | low | > 56 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.41 | Echvi_4670 | | ATP-dependent protease La | 0.39 | Echvi_2202 | | branched-chain amino acid aminotransferase, group II | low | > 79 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.40 | CA265_RS14555 | | endopeptidase La | 0.38 | CA265_RS22650 | | branched chain amino acid aminotransferase | 0.46 | 54 |
| Parabacteroides merdae CL09T00C40 | 0.40 | HMPREF1078_RS16185 | | endopeptidase La | 0.30 | HMPREF1078_RS07855 | | branched-chain amino acid aminotransferase | low | > 61 |
| Bacteroides ovatus ATCC 8483 | 0.39 | BACOVA_02571 | | endopeptidase La | 0.30 | BACOVA_01113 | | branched-chain-amino-acid transaminase | low | > 94 |
| Phocaeicola vulgatus CL09T03C04 | 0.39 | HMPREF1058_RS01210 | | endopeptidase La | 0.29 | HMPREF1058_RS02220 | | branched-chain amino acid aminotransferase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.39 | ABI39_RS16520 | | endopeptidase La | 0.30 | ABI39_RS01415 | | branched-chain amino acid aminotransferase | low | > 72 |
Not shown: 9 genomes with orthologs for Xcc-8004.4046.1 only; 4 genomes with orthologs for Xcc-8004.4199.1 only