| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS03615 | | (dimethylallyl)adenosine tRNA methylthiotransferase | 1.0 | HSERO_RS10665 | | coproporphyrinogen III oxidase | 0.28 | 10 |
| Paraburkholderia sabiae LMG 24235 | 0.76 | QEN71_RS02195 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.68 | QEN71_RS03635 | | radical SAM family heme chaperone HemW | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.75 | GFF613 | | tRNA-i(6)A37 methylthiotransferase | 0.59 | GFF3256 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 90 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.75 | H281DRAFT_04239 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | 0.70 | H281DRAFT_04010 | | oxygen-independent coproporphyrinogen-3 oxidase | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.75 | BPHYT_RS16535 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | 0.70 | BPHYT_RS15335 | | coproporphyrinogen III oxidase | low | > 109 |
| Dechlorosoma suillum PS | 0.74 | Dsui_1194 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | 0.54 | Dsui_0491 | | putative oxygen-independent coproporphyrinogen III oxidase | low | > 51 |
| Ralstonia solanacearum PSI07 | 0.73 | RPSI07_RS21380 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.64 | RPSI07_RS13830 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.73 | RR42_RS02855 | | dimethylallyladenosine tRNA methylthiotransferase | 0.66 | RR42_RS04880 | | coproporphyrinogen III oxidase | low | > 128 |
| Ralstonia solanacearum IBSBF1503 | 0.73 | RALBFv3_RS11825 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.62 | RALBFv3_RS03355 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.73 | UW163_RS01760 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.62 | UW163_RS10365 | | oxygen-independent coproporphyrinogen III oxidase-like protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.73 | RS_RS02645 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.63 | RS_RS10840 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.73 | ABZR87_RS07780 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.63 | ABZR87_RS15265 | | radical SAM family heme chaperone HemW | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.72 | Ac3H11_4008 | | tRNA-i(6)A37 methylthiotransferase | 0.55 | Ac3H11_3672 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 79 |
| Variovorax sp. OAS795 | 0.71 | ABID97_RS06475 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.59 | ABID97_RS23630 | | radical SAM family heme chaperone HemW | low | > 91 |
| Variovorax sp. SCN45 | 0.71 | GFF7320 | | tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) | 0.58 | GFF2383 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS15345 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.52 | ABCV34_RS03525 | | radical SAM family heme chaperone HemW | low | > 48 |
| Rhodanobacter denitrificans MT42 | 0.68 | LRK55_RS13465 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | LRK55_RS11460 | | radical SAM family heme chaperone HemW | low | > 63 |
| Dyella japonica UNC79MFTsu3.2 | 0.68 | ABZR86_RS09895 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | ABZR86_RS11910 | | radical SAM family heme chaperone HemW | low | > 74 |
| Lysobacter sp. OAE881 | 0.67 | ABIE51_RS15455 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.46 | ABIE51_RS17300 | | radical SAM family heme chaperone HemW | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.67 | LRK54_RS13750 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | LRK54_RS11735 | | radical SAM family heme chaperone HemW | low | > 59 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.67 | Xcc-8004.2224.1 | | tRNA-i(6)A37 methylthiotransferase | 0.46 | Xcc-8004.1224.1 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.67 | OKGIIK_02990 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.42 | OKGIIK_12160 | hemW | radical SAM family heme chaperone HemW | low | > 52 |
| Kangiella aquimarina DSM 16071 | 0.66 | B158DRAFT_0099 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | 0.49 | B158DRAFT_0201 | | coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) | low | > 40 |
| Marinobacter adhaerens HP15 | 0.64 | HP15_2466 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | 0.40 | HP15_280 | | putative oxygen-independent coproporphyrinogen III oxidase | low | > 73 |
| Pantoea sp. MT58 | 0.63 | IAI47_13945 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.44 | IAI47_03580 | | radical SAM family heme chaperone HemW | low | > 76 |
| Shewanella amazonensis SB2B | 0.63 | Sama_2575 | | tRNA-i(6)A37 modification enzyme MiaB (RefSeq) | 0.41 | Sama_2483 | | oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_01480 | | (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB | 0.40 | MIT1002_00939 | | Oxygen-independent coproporphyrinogen-III oxidase 1 | low | > 70 |
| Shewanella sp. ANA-3 | 0.62 | Shewana3_1008 | | tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) | 0.43 | Shewana3_1188 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.62 | SO1181 | miaB | tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) | 0.44 | SO3359 | | oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) | 0.28 | 64 |
| Pseudomonas sp. S08-1 | 0.62 | OH686_09215 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | 0.47 | OH686_11020 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | low | > 80 |
| Escherichia coli ECRC62 | 0.62 | BNILDI_21610 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | BNILDI_09685 | hemW | radical SAM family heme chaperone HemW | low | > 75 |
| Escherichia coli ECRC101 | 0.62 | MCAODC_26440 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | MCAODC_09755 | hemW | radical SAM family heme chaperone HemW | low | > 87 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_01005 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | HEPCGN_18540 | hemW | radical SAM family heme chaperone HemW | low | > 87 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_23605 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | NOLOHH_11105 | hemW | radical SAM family heme chaperone HemW | low | > 75 |
| Escherichia coli ECRC98 | 0.62 | JDDGAC_10870 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | JDDGAC_22865 | hemW | radical SAM family heme chaperone HemW | low | > 86 |
| Escherichia coli BL21 | 0.62 | ECD_00629 | | tRNA-i(6)A37 methylthiotransferase | 0.43 | ECD_02785 | | HemN family putative oxidoreductase | low | > 61 |
| Escherichia coli ECRC99 | 0.62 | KEDOAH_20745 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | KEDOAH_08905 | hemW | radical SAM family heme chaperone HemW | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_1380 | | tRNA-i(6)A37 methylthiotransferase | 0.48 | PfGW456L13_1003 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 87 |
| Escherichia fergusonii Becca | 0.62 | EFB2_03438 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | 0.43 | EFB2_00947 | | Heme chaperone HemW | low | > 86 |
| Escherichia coli ECRC100 | 0.62 | OKFHMN_07225 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | OKFHMN_19235 | hemW | radical SAM family heme chaperone HemW | low | > 80 |
| Escherichia coli ECRC102 | 0.62 | NIAGMN_05280 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | NIAGMN_17000 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_03051 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | 0.43 | OHPLBJKB_00761 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.62 | GFF4579 | | tRNA-i(6)A37 methylthiotransferase | 0.43 | GFF3058 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 78 |
| Escherichia coli BW25113 | 0.62 | b0661 | miaB | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | 0.43 | b2955 | yggW | coproporphyrinogen III oxidase (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS03555 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | ECOLIN_RS16435 | | radical SAM family heme chaperone HemW | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.62 | AO356_15410 | | (dimethylallyl)adenosine tRNA methylthiotransferase | 0.46 | AO356_13390 | | coproporphyrinogen III oxidase | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_4345 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | 0.46 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_06375 | | (dimethylallyl)adenosine tRNA methylthiotransferase | 0.48 | AO353_08200 | | coproporphyrinogen III oxidase | low | > 101 |
| Serratia liquefaciens MT49 | 0.62 | IAI46_06025 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.44 | IAI46_21435 | | radical SAM family heme chaperone HemW | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_4345 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | 0.46 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_5018 | | tRNA-i(6)A37 methylthiotransferase | 0.48 | Pf6N2E2_4593 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_2712 | | tRNA-i(6)A37 methylthiotransferase | 0.47 | Pf1N1B4_2334 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 87 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_03848 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | 0.46 | PFR28_04249 | | Heme chaperone HemW | low | > 88 |
| Erwinia tracheiphila SCR3 | 0.61 | LU632_RS16305 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.44 | LU632_RS05445 | hemW | radical SAM family heme chaperone HemW | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.61 | CSW01_04915 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.42 | CSW01_02425 | | YggW family oxidoreductase | low | > 62 |
| Pseudomonas simiae WCS417 | 0.61 | PS417_24625 | | (dimethylallyl)adenosine tRNA methylthiotransferase | 0.49 | PS417_26760 | | oxidase | 0.23 | 19 |
| Shewanella loihica PV-4 | 0.61 | Shew_2923 | | tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) | 0.42 | Shew_1131 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 60 |
| Pseudomonas fluorescens SBW25 | 0.61 | PFLU_RS26555 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.49 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.61 | PFLU_RS26555 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.49 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | low | > 109 |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS08135 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | BWI76_RS24120 | | YggW family oxidoreductase | — | — |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_0532 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | 0.45 | Psest_0276 | | putative oxygen-independent coproporphyrinogen III oxidase | low | > 67 |
| Pectobacterium carotovorum WPP14 | 0.61 | HER17_RS15165 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.45 | HER17_RS03785 | | radical SAM family heme chaperone HemW | low | > 75 |
| Enterobacter sp. TBS_079 | 0.60 | MPMX20_01311 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | 0.42 | MPMX20_03813 | | Heme chaperone HemW | low | > 85 |
| Dickeya dadantii 3937 | 0.60 | DDA3937_RS06250 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.42 | DDA3937_RS17325 | | radical SAM family heme chaperone HemW | low | > 74 |
| Dickeya dianthicola 67-19 | 0.60 | HGI48_RS06295 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | HGI48_RS17370 | | radical SAM family heme chaperone HemW | low | > 71 |
| Enterobacter asburiae PDN3 | 0.60 | EX28DRAFT_2310 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | 0.42 | EX28DRAFT_2993 | | putative oxygen-independent coproporphyrinogen III oxidase | low | > 76 |
| Dickeya dianthicola ME23 | 0.60 | DZA65_RS06640 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.43 | DZA65_RS18460 | | radical SAM family heme chaperone HemW | low | > 75 |
| Rahnella sp. WP5 | 0.60 | EX31_RS23205 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.44 | EX31_RS02710 | | radical SAM family heme chaperone HemW | low | > 89 |
| Acinetobacter radioresistens SK82 | 0.56 | MPMX26_02667 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | 0.38 | MPMX26_00308 | | Heme chaperone HemW | low | > 36 |
| Dinoroseobacter shibae DFL-12 | 0.45 | Dshi_1019 | | RNA modification enzyme, MiaB family (RefSeq) | 0.30 | Dshi_3460 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 64 |
| Azospirillum brasilense Sp245 | 0.43 | AZOBR_RS01475 | | (dimethylallyl)adenosine tRNA methylthiotransferase | 0.31 | AZOBR_RS02195 | | coproporphyrinogen III oxidase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.43 | MPMX19_02511 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | 0.31 | MPMX19_02574 | | Heme chaperone HemW | low | > 112 |
| Agrobacterium fabrum C58 | 0.43 | Atu0356 | | miaB protein | 0.29 | Atu0325 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.43 | AMB_RS22585 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | 0.27 | AMB_RS22770 | | radical SAM protein | low | > 64 |
| Caulobacter crescentus NA1000 Δfur | 0.42 | CCNA_00054 | | tRNA 2-methylthioadenosine synthase | 0.26 | CCNA_00144 | | oxygen-independent coproporphyrinogen-III oxidase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.42 | CCNA_00054 | | tRNA 2-methylthioadenosine synthase | 0.26 | CCNA_00144 | | oxygen-independent coproporphyrinogen-III oxidase | low | > 66 |
| Phaeobacter inhibens DSM 17395 | 0.42 | PGA1_c04710 | | (dimethylallyl)adenosine tRNA methylthiotransferase MiaB | 0.29 | PGA1_c35050 | | oxygen-independent coproporphyrinogen III oxidase HemN | low | > 62 |
| Bosea sp. OAE506 | 0.42 | ABIE41_RS04495 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.31 | ABIE41_RS03305 | | radical SAM family heme chaperone HemW | low | > 77 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.41 | A4249_RS14720 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.25 | A4249_RS12445 | | radical SAM family heme chaperone HemW | low | > 48 |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A3770 | | tRNA-i(6)A37 modification enzyme MiaB (NCBI) | 0.29 | Rru_A3639 | | Putative oxygen-independent coproporphyrinogen III oxidase (NCBI) | low | > 58 |
| Synechococcus elongatus PCC 7942 | 0.38 | Synpcc7942_2374 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | 0.21 | Synpcc7942_2382 | hemN | coproporphyrinogen III oxidase | low | > 38 |
| Rhodopseudomonas palustris CGA009 | 0.38 | TX73_002325 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.29 | TX73_001700 | | radical SAM family heme chaperone HemW | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.38 | BT3195 | | conserved hypothetical protein (NCBI ptt file) | 0.20 | BT2168 | | coproporphyrinogen III oxidase (NCBI ptt file) | low | > 81 |
| Parabacteroides merdae CL09T00C40 | 0.35 | HMPREF1078_RS17135 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.22 | HMPREF1078_RS11035 | | radical SAM family heme chaperone HemW | 0.52 | 54 |
| Desulfovibrio vulgaris Miyazaki F | 0.34 | DvMF_1330 | | RNA modification enzyme, MiaB family (RefSeq) | 0.21 | DvMF_2374 | | oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 51 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.32 | Echvi_2376 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | 0.20 | Echvi_0628 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.48 | 7 |
Not shown: 16 genomes with orthologs for HSERO_RS03615 only; 2 genomes with orthologs for HSERO_RS10665 only