Conservation of cofitness between HER17_RS02805 and HER17_RS07020 in Pectobacterium carotovorum WPP14

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS07020 amidophosphoribosyltransferase 0.94 14
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.94 DDA3937_RS14435 amidophosphoribosyltransferase 0.70 55
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.94 DZA65_RS15335 amidophosphoribosyltransferase 0.60 38
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.94 HGI48_RS14405 amidophosphoribosyltransferase 0.70 15
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.90 EX31_RS19570 amidophosphoribosyltransferase 0.92 61
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.92 IAI46_17810 amidophosphoribosyltransferase low > 86
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.90 IAI47_06275 amidophosphoribosyltransferase 0.78 67
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.91 LU632_RS07865 purF amidophosphoribosyltransferase — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.91 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.91 MPMX20_03247 Amidophosphoribosyltransferase 0.87 46
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.91 BWI76_RS20350 amidophosphoribosyltransferase 0.84 44
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.91 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.90 BNILDI_13255 purF amidophosphoribosyltransferase low > 75
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.91 ECD_02237 amidophosphoribosyltransferase low > 61
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.91 EFB2_01546 Amidophosphoribosyltransferase low > 86
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.91 OKFHMN_22715 purF amidophosphoribosyltransferase low > 80
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.91 MCAODC_13755 purF amidophosphoribosyltransferase low > 87
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.91 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.91 JDDGAC_26675 purF amidophosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.91 HEPCGN_21910 purF amidophosphoribosyltransferase low > 87
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.91 NOLOHH_14335 purF amidophosphoribosyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.90 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.91 b2312 purF amidophosphoribosyltransferase (NCBI) 0.82 60
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.91 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.91 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.77 CSW01_05115 amidophosphoribosyltransferase low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.71 MIT1002_02524 Amidophosphoribosyltransferase 0.86 56
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.74 Shew_2302 amidophosphoribosyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.73 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.86 73
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.73 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.75 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS10395 threonine synthase 0.12 HMPREF1078_RS10430 amidophosphoribosyltransferase low > 61
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.58 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.73 62
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.29 PGA1_c10810 amidophosphoribosyltransferase PurF — —
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.58 ABIE51_RS06180 amidophosphoribosyltransferase low > 62
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.62 AO356_21465 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.62 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.63 PP_2000 amidophosphoribosyl transferase — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.62 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.62 Psyr_1668 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.58 LRK55_RS01105 amidophosphoribosyltransferase low > 63
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.62 Psyr_1668 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.58 LRK54_RS01340 amidophosphoribosyltransferase low > 59
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.63 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.63 OH686_04420 amidophosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.62 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.63 PFLU_RS20515 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.63 PFLU_RS20515 amidophosphoribosyltransferase 0.90 6
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.63 PFR28_02811 Amidophosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.59 ABZR86_RS06775 amidophosphoribosyltransferase 0.96 12
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.59 OKGIIK_05570 purF amidophosphoribosyltransferase 0.74 6
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.29 SMc00554 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.32 CCNA_01730 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.32 CCNA_01730 amidophosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.62 Psest_2579 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.29 ABIE41_RS17810 amidophosphoribosyltransferase — —
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.28 Dshi_2132 amidophosphoribosyltransferase (RefSeq) — —
Rhodospirillum rubrum S1H 0.26 Rru_A3233 Threonine synthase (NCBI) 0.30 Rru_A0404 Amidophosphoribosyl transferase (NCBI) — —
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.29 Atu1075 amidophosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.29 MPMX19_00906 Amidophosphoribosyltransferase — —
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.29 ABIE40_RS06270 amidophosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.29 AZOBR_RS08310 amidophosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.63 HP15_1821 amidophosphoribosyltransferase — —
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.28 TX73_015990 amidophosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.55 ABCV34_RS04130 amidophosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.29 A4249_RS03735 amidophosphoribosyltransferase — —
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.28 AMB_RS10545 amidophosphoribosyltransferase — —
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.57 Dsui_3186 amidophosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.28 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.53 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.52 ABID97_RS21635 amidophosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.60 ABZR87_RS14465 amidophosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.54 QEN71_RS17680 amidophosphoribosyltransferase 0.75 44
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.53 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.57 HSERO_RS16445 amidophosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.55 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Bifidobacterium breve UCC2003 0.21 BBR_RS14070 threonine synthase 0.30 BBR_RS13380 amidophosphoribosyltransferase low > 34
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.56 RR42_RS14325 amidophosphoribosyltransferase — —
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.56 ABIE53_004816 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.56 H281DRAFT_06060 amidophosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.59 RS_RS09930 amidophosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.57 BPHYT_RS33840 amidophosphoribosyltransferase 0.75 13
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.59 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.59 UW163_RS11175 amidophosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.59 RPSI07_RS14765 amidophosphoribosyltransferase — —

Not shown: 9 genomes with orthologs for HER17_RS02805 only; 9 genomes with orthologs for HER17_RS07020 only