| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Sphingomonas koreensis DSMZ 15582 | 1.0 | Ga0059261_2764 | | Site-specific recombinase XerD | 1.0 | Ga0059261_0159 | | Transcriptional regulator | 0.40 | 6 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.48 | A4249_RS12210 | | tyrosine recombinase XerC | 0.37 | A4249_RS12755 | | hydrogen peroxide-inducible genes activator | low | > 48 |
| Caulobacter crescentus NA1000 Δfur | 0.47 | CCNA_00349 | | integrase/recombinase, XerC-CodV family | 0.42 | CCNA_03811 | | LysR-family transcriptional regulator | — | — |
| Caulobacter crescentus NA1000 | 0.47 | CCNA_00349 | | integrase/recombinase, XerC-CodV family | 0.42 | CCNA_03811 | | LysR-family transcriptional regulator | low | > 66 |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_5002 | xerC | hypothetical protein (NCBI) | 0.31 | Dshi_3802 | | transcriptional regulator, LysR family (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.44 | PGA1_c05760 | | putative tyrosine recombinase XerC | 0.39 | PGA1_78p00040 | | hydrogen peroxide-inducible genes activator OxyR | — | — |
| Agrobacterium fabrum C58 | 0.43 | Atu2628 | | site-specific recombinase | 0.34 | Atu4641 | | LysR family transcriptional regulator | — | — |
| Magnetospirillum magneticum AMB-1 | 0.43 | AMB_RS21485 | | tyrosine recombinase XerC | 0.47 | AMB_RS03045 | | hydrogen peroxide-inducible genes activator | — | — |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS17950 | | tyrosine recombinase XerC | 0.27 | ABIE40_RS15045 | | hydrogen peroxide-inducible genes activator | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.42 | SMc02489 | | site-specific tyrosine recombinase XerC | 0.33 | SMc00818 | | hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.42 | TX73_000945 | | tyrosine recombinase XerC | 0.32 | TX73_002235 | | LysR substrate-binding domain-containing protein | low | > 86 |
| Azospirillum brasilense Sp245 | 0.41 | AZOBR_RS03965 | | tyrosine recombinase XerC | 0.31 | AZOBR_RS31340 | | LysR family transcriptional regulator | — | — |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS07870 | | tyrosine recombinase XerC | 0.31 | ABIE41_RS01195 | | hydrogen peroxide-inducible genes activator | low | > 77 |
| Rhodospirillum rubrum S1H | 0.41 | Rru_A1220 | | Phage integrase (NCBI) | 0.42 | Rru_A0334 | | Transcriptional Regulator, LysR family (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.40 | MPMX19_02110 | | Tyrosine recombinase XerC | 0.48 | MPMX19_05834 | | Hydrogen peroxide-inducible genes activator | — | — |
| Dechlorosoma suillum PS | 0.27 | Dsui_0651 | | tyrosine recombinase XerC | 0.31 | Dsui_0823 | | transcriptional regulator | low | > 51 |
| Lysobacter sp. OAE881 | 0.27 | ABIE51_RS03035 | | tyrosine recombinase XerC | 0.33 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | low | > 62 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.27 | H281DRAFT_02202 | | integrase/recombinase XerC | 0.30 | H281DRAFT_04673 | | transcriptional regulator, LysR family | — | — |
| Burkholderia phytofirmans PsJN | 0.27 | BPHYT_RS01655 | | tyrosine recombinase XerC | 0.29 | BPHYT_RS03470 | | LysR family transcriptional regulator | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.27 | ABZR86_RS15025 | | tyrosine recombinase XerC | 0.30 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | low | > 74 |
| Shewanella loihica PV-4 | 0.27 | Shew_0325 | | tyrosine recombinase XerC (RefSeq) | 0.33 | Shew_1035 | | LysR family transcriptional regulator (RefSeq) | low | > 60 |
| Paraburkholderia graminis OAS925 | 0.27 | ABIE53_000426 | | integrase/recombinase XerC | 0.29 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.26 | AO356_12725 | | recombinase XerC | 0.30 | AO356_12385 | | LysR family transcriptional regulator | low | > 104 |
| Alteromonas macleodii MIT1002 | 0.26 | MIT1002_00157 | | Tyrosine recombinase XerC | 0.29 | MIT1002_00881 | | Morphology and auto-aggregation control protein | low | > 70 |
| Pseudomonas fluorescens FW300-N2E2 | 0.26 | Pf6N2E2_4416 | | Tyrosine recombinase XerC | 0.32 | Pf6N2E2_4353 | | Hydrogen peroxide-inducible genes activator | 0.47 | 5 |
| Pseudomonas fluorescens GW456-L13 | 0.26 | PfGW456L13_842 | | Tyrosine recombinase XerC | 0.29 | PfGW456L13_773 | | Hydrogen peroxide-inducible genes activator | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.26 | Pf1N1B4_2171 | | Tyrosine recombinase XerC | 0.29 | Pf1N1B4_2106 | | Hydrogen peroxide-inducible genes activator | low | > 87 |
| Acinetobacter radioresistens SK82 | 0.26 | MPMX26_02230 | | Tyrosine recombinase XerC | 0.36 | MPMX26_02334 | | Hydrogen peroxide-inducible genes activator | — | — |
| Kangiella aquimarina DSM 16071 | 0.26 | B158DRAFT_0244 | | tyrosine recombinase XerC subunit | 0.32 | B158DRAFT_0277 | | Transcriptional regulator | low | > 40 |
| Pseudomonas sp. RS175 | 0.26 | PFR28_04378 | | Tyrosine recombinase XerC | 0.30 | PFR28_04434 | | Hydrogen peroxide-inducible genes activator | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_0185 | | tyrosine recombinase XerC subunit | 0.31 | Psyr_0202 | | transcriptional regulator, LysR family | low | > 86 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.26 | Echvi_0827 | | Site-specific recombinase XerD | 0.23 | Echvi_1045 | | Transcriptional regulator | 0.22 | 59 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_0185 | | tyrosine recombinase XerC subunit | 0.31 | Psyr_0202 | | transcriptional regulator, LysR family | low | > 86 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.26 | ABZR88_RS17800 | | tyrosine-type recombinase/integrase | 0.25 | ABZR88_RS18535 | | hydrogen peroxide-inducible genes activator | low | > 71 |
| Pseudomonas fluorescens FW300-N2E3 | 0.26 | AO353_09050 | | recombinase XerC | 0.29 | AO353_09315 | | LysR family transcriptional regulator | 0.35 | 13 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS00355 | | tyrosine recombinase XerC | 0.31 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | — | — |
| Pseudomonas putida KT2440 | 0.26 | PP_5230 | | Tyrosine recombinase XerC | 0.32 | PP_5309 | | oxidative and nitrosative stress transcriptional dual regulator | 0.36 | 11 |
| Marinobacter adhaerens HP15 | 0.26 | HP15_250 | | site-specific tyrosine recombinase XerC | 0.28 | HP15_308 | | oxidative stress regulatory protein OxyR | low | > 73 |
| Pseudomonas sp. S08-1 | 0.25 | OH686_13785 | | tyrosine recombinase XerC | 0.31 | OH686_13510 | | Hydrogen peroxide-inducible genes activator | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.847.1 | | Site-specific tyrosine recombinase | 0.34 | Xcc-8004.4224.1 | | Hydrogen peroxide-inducible genes activator | — | — |
| Shewanella sp. ANA-3 | 0.25 | Shewana3_0393 | | tyrosine recombinase XerC (RefSeq) | 0.33 | Shewana3_3046 | | LysR family transcriptional regulator (RefSeq) | low | > 73 |
| Rhodanobacter denitrificans MT42 | 0.25 | LRK55_RS08300 | | tyrosine recombinase XerC | 0.31 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | low | > 63 |
| Bacteroides ovatus ATCC 8483 | 0.25 | BACOVA_01050 | | site-specific recombinase, phage integrase family/ribosomal subunit interface protein | 0.26 | BACOVA_05567 | | LysR substrate binding domain protein | low | > 94 |
| Rhodanobacter sp. FW510-T8 | 0.25 | OKGIIK_15325 | xerC | tyrosine recombinase XerC | 0.32 | OKGIIK_01995 | lysR | DNA-binding transcriptional regulator OxyR | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.25 | CA265_RS02835 | | integrase | 0.25 | CA265_RS19680 | | DNA-binding transcriptional regulator OxyR | low | > 88 |
| Cupriavidus basilensis FW507-4G11 | 0.25 | RR42_RS00615 | | recombinase XerC | 0.30 | RR42_RS17385 | | LysR family transcriptional regulator | 0.29 | 108 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.25 | GFF547 | | Tyrosine recombinase XerC | 0.28 | GFF2803 | | Hydrogen peroxide-inducible genes activator | low | > 90 |
| Herbaspirillum seropedicae SmR1 | 0.25 | HSERO_RS21475 | | recombinase XerC | 0.29 | HSERO_RS18935 | | LysR family transcriptional regulator | low | > 78 |
| Vibrio cholerae E7946 ATCC 55056 | 0.25 | CSW01_00650 | | tyrosine recombinase XerC | 0.33 | CSW01_03820 | | hydrogen peroxide-inducible genes activator | low | > 62 |
| Pantoea sp. MT58 | 0.25 | IAI47_18400 | | tyrosine recombinase XerC | 0.30 | IAI47_00930 | | DNA-binding transcriptional regulator OxyR | 0.35 | 42 |
| Variovorax sp. SCN45 | 0.25 | GFF4490 | | Site-specific tyrosine recombinase XerC | 0.28 | GFF5549 | | Hydrogen peroxide-inducible genes activator => OxyR | low | > 127 |
| Rhodanobacter denitrificans FW104-10B01 | 0.25 | LRK54_RS08535 | | tyrosine recombinase XerC | 0.31 | LRK54_RS04765 | | LysR substrate-binding domain-containing protein | low | > 59 |
| Acidovorax sp. GW101-3H11 | 0.24 | Ac3H11_1995 | | Tyrosine recombinase XerC | 0.28 | Ac3H11_784 | | Hydrogen peroxide-inducible genes activator | low | > 79 |
| Erwinia tracheiphila SCR3 | 0.24 | LU632_RS24135 | xerC | tyrosine recombinase XerC | 0.29 | LU632_RS19590 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Castellaniella sp019104865 MT123 | 0.24 | ABCV34_RS13455 | | tyrosine recombinase XerC | 0.30 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS29280 | | tyrosine recombinase XerC | 0.30 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_27595 | | recombinase XerC | 0.29 | PS417_27865 | | LysR family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS29280 | | tyrosine recombinase XerC | 0.30 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | low | > 109 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.24 | BT2742 | | integrase, site-specific recombinase (NCBI ptt file) | 0.25 | BT4716 | | redox-sensitive transcriptional activator (NCBI ptt file) | low | > 81 |
| Ralstonia solanacearum PSI07 | 0.24 | RPSI07_RS23690 | | tyrosine recombinase XerC | 0.30 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.24 | RS_RS00260 | | Tyrosine recombinase XerC 1 | 0.30 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | low | > 80 |
| Rahnella sp. WP5 | 0.24 | EX31_RS15165 | | tyrosine recombinase XerC | 0.30 | EX31_RS14170 | | DNA-binding transcriptional regulator OxyR | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF239 | | Tyrosine recombinase XerC | 0.30 | GFF2347 | | Hydrogen peroxide-inducible genes activator | — | — |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS20045 | | tyrosine recombinase XerC | 0.30 | HGI48_RS20405 | | DNA-binding transcriptional regulator OxyR | low | > 71 |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_12175 | xerC | tyrosine recombinase XerC | 0.31 | NIAGMN_11315 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_13730 | xerC | tyrosine recombinase XerC | 0.31 | KEDOAH_14595 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Ralstonia solanacearum UW163 | 0.23 | UW163_RS03905 | | tyrosine recombinase XerC | 0.32 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | — | — |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_18045 | xerC | tyrosine recombinase XerC | 0.31 | JDDGAC_17190 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia coli ECRC100 | 0.23 | OKFHMN_14420 | xerC | tyrosine recombinase XerC | 0.31 | OKFHMN_13565 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 80 |
| Bacteroides stercoris CC31F | 0.23 | HMPREF1181_RS00625 | | tyrosine recombinase XerC | 0.23 | HMPREF1181_RS02160 | | hydrogen peroxide-inducible genes activator | low | > 56 |
| Escherichia coli ECRC101 | 0.23 | MCAODC_04925 | xerC | tyrosine recombinase XerC | 0.31 | MCAODC_04065 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Variovorax sp. OAS795 | 0.23 | ABID97_RS06150 | | tyrosine recombinase XerC | 0.28 | ABID97_RS01570 | | LysR substrate-binding domain-containing protein | 0.43 | 78 |
| Ralstonia solanacearum IBSBF1503 | 0.23 | RALBFv3_RS09675 | | tyrosine recombinase XerC | 0.32 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | low | > 76 |
| Dickeya dianthicola ME23 | 0.23 | DZA65_RS21090 | | tyrosine recombinase XerC | 0.30 | DZA65_RS21450 | | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Escherichia coli BL21 | 0.23 | ECD_03687 | | site-specific tyrosine recombinase | 0.31 | ECD_03846 | | oxidative and nitrosative stress transcriptional regulator | 0.42 | 24 |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS01210 | | tyrosine recombinase XerC | 0.30 | BWI76_RS00865 | | DNA-binding transcriptional regulator OxyR | low | > 92 |
| Enterobacter asburiae PDN3 | 0.23 | EX28DRAFT_4480 | | tyrosine recombinase XerC | 0.30 | EX28DRAFT_4424 | | Transcriptional regulator | — | — |
| Escherichia fergusonii Becca | 0.23 | EFB2_04826 | | Tyrosine recombinase XerC | 0.31 | EFB2_04651 | | Hydrogen peroxide-inducible genes activator | low | > 86 |
| Escherichia coli BW25113 | 0.23 | b3811 | xerC | site-specific tyrosine recombinase XerC (NCBI) | 0.31 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.23 | Psest_3767 | | tyrosine recombinase XerC | 0.32 | Psest_4191 | | Transcriptional regulator | 0.22 | 49 |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS21875 | | tyrosine recombinase XerC | 0.31 | ECOLIN_RS22870 | | DNA-binding transcriptional regulator OxyR | low | > 55 |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_06550 | xerC | tyrosine recombinase XerC | 0.31 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Escherichia coli ECRC62 | 0.23 | BNILDI_04985 | xerC | tyrosine recombinase XerC | 0.31 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_13125 | xerC | tyrosine recombinase XerC | 0.31 | HEPCGN_12210 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_04239 | | Tyrosine recombinase XerC | 0.31 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | low | > 73 |
| Ralstonia sp. UNC404CL21Col | 0.22 | ABZR87_RS05065 | | tyrosine recombinase XerC | 0.31 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | 0.42 | 58 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.22 | CA264_19035 | | integrase | 0.25 | CA264_13765 | | DNA-binding transcriptional regulator OxyR | — | — |
| Parabacteroides merdae CL09T00C40 | 0.22 | HMPREF1078_RS10885 | | tyrosine recombinase XerC | 0.25 | HMPREF1078_RS01140 | | hydrogen peroxide-inducible genes activator | low | > 61 |
| Phocaeicola dorei CL03T12C01 | 0.22 | ABI39_RS03835 | | tyrosine-type recombinase/integrase | 0.24 | ABI39_RS06075 | | hydrogen peroxide-inducible genes activator | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.21 | DvMF_0767 | | integrase family protein (RefSeq) | 0.13 | DvMF_2138 | | transcriptional regulator, LysR family (RefSeq) | low | > 51 |
Not shown: 3 genomes with orthologs for Ga0059261_2764 only; 7 genomes with orthologs for Ga0059261_0159 only