Conservation of cofitness between GFF1222 and GFF4252 in Hydrogenophaga sp. GW460-11-11-14-LB1

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 1.0 GFF4252 FIG000557: hypothetical protein co-occurring with RecR 0.78 8
Acidovorax sp. GW101-3H11 0.69 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.96 Ac3H11_472 FIG000557: hypothetical protein co-occurring with RecR
Variovorax sp. SCN45 0.68 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.92 GFF1109 Nucleoid-associated protein YaaK
Variovorax sp. OAS795 0.66 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.92 ABID97_RS14695 YbaB/EbfC family nucleoid-associated protein
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.73 H281DRAFT_00833 hypothetical protein
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.77 HSERO_RS18365 hypothetical protein low > 78
Ralstonia solanacearum GMI1000 0.45 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.68 RS_RS05975 YbaB/EbfC family nucleoid-associated protein
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.68 RALBFv3_RS15160 nucleoid-associated protein, YbaB/EbfC family
Ralstonia solanacearum UW163 0.45 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.68 UW163_RS12630 nucleoid-associated protein, YbaB/EbfC family
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.73 QEN71_RS22290 YbaB/EbfC family nucleoid-associated protein
Paraburkholderia graminis OAS925 0.44 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.73 ABIE53_002047 DNA-binding YbaB/EbfC family protein
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.70 ABZR87_RS10800 YbaB/EbfC family nucleoid-associated protein low > 80
Ralstonia solanacearum PSI07 0.44 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.68 RPSI07_RS18215 YbaB/EbfC family nucleoid-associated protein
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.74 BPHYT_RS09060 hypothetical protein
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.71 RR42_RS13280 hypothetical protein
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.68 ABCV34_RS15475 YbaB/EbfC family nucleoid-associated protein
Dechlorosoma suillum PS 0.41 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.64 Dsui_1810 DNA-binding protein, YbaB/EbfC family
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.52 OKGIIK_05650 ybaB YbaB/EbfC family nucleoid-associated protein
Lysobacter sp. OAE881 0.40 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 ABIE51_RS14015 YbaB/EbfC family nucleoid-associated protein
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.48 B158DRAFT_2479 DNA-binding protein, YbaB/EbfC family
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.53 ABZR86_RS06240 YbaB/EbfC family nucleoid-associated protein
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.51 Xcc-8004.4013.1 FIG000557: hypothetical protein co-occurring with RecR low > 74
Rhodanobacter denitrificans MT42 0.38 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.54 LRK55_RS01025 YbaB/EbfC family nucleoid-associated protein
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.54 LRK54_RS01255 YbaB/EbfC family nucleoid-associated protein
Alteromonas macleodii MIT1002 0.38 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.67 MIT1002_02653 Nucleoid-associated protein YbaB low > 70
Serratia liquefaciens MT49 0.36 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 IAI46_05235 YbaB/EbfC family nucleoid-associated protein
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU3159 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (TIGR) 0.30 DVU3199 conserved hypothetical protein TIGR00103 (TIGR) low > 55
Pectobacterium carotovorum WPP14 0.35 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 HER17_RS15700 YbaB/EbfC family nucleoid-associated protein
Dickeya dadantii 3937 0.35 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 DDA3937_RS05785 YbaB/EbfC family nucleoid-associated protein
Shewanella oneidensis MR-1 0.35 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.55 SO2014 conserved hypothetical protein TIGR00103 (NCBI ptt file)
Shewanella amazonensis SB2B 0.35 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.60 Sama_1311 hypothetical protein (RefSeq)
Dickeya dianthicola ME23 0.35 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 DZA65_RS06160 YbaB/EbfC family nucleoid-associated protein
Shewanella loihica PV-4 0.35 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.62 Shew_2234 hypothetical protein (RefSeq)
Dickeya dianthicola 67-19 0.35 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 HGI48_RS05835 YbaB/EbfC family nucleoid-associated protein
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.62 CSW01_05370 YbaB/EbfC family nucleoid-associated protein
Shewanella sp. ANA-3 0.34 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.57 Shewana3_2445 hypothetical protein (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.36 Ga0059261_0668 DNA-binding protein, YbaB/EbfC family
Escherichia coli ECRC102 0.34 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 NIAGMN_06215 ybaB YbaB/EbfC family nucleoid-associated protein
Escherichia coli ECRC101 0.34 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 MCAODC_27385 ybaB YbaB/EbfC family nucleoid-associated protein
Escherichia coli ECRC100 0.34 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 OKFHMN_08160 ybaB YbaB/EbfC family nucleoid-associated protein
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.62 OHPLBJKB_03203 Nucleoid-associated protein YbaB
Escherichia coli Nissle 1917 0.34 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 ECOLIN_RS02800 YbaB/EbfC family nucleoid-associated protein
Rhodospirillum rubrum S1H 0.34 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.36 Rru_A3472 hypothetical protein (NCBI)
Escherichia coli ECOR38 0.34 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 HEPCGN_06775 ybaB YbaB/EbfC family nucleoid-associated protein
Escherichia fergusonii Becca 0.34 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.62 EFB2_03587 Nucleoid-associated protein YbaB
Escherichia coli ECOR27 0.34 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 NOLOHH_01090 ybaB YbaB/EbfC family nucleoid-associated protein
Escherichia coli ECRC99 0.34 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 KEDOAH_19805 ybaB YbaB/EbfC family nucleoid-associated protein
Escherichia coli ECRC98 0.34 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 JDDGAC_11810 ybaB YbaB/EbfC family nucleoid-associated protein
Escherichia coli ECRC62 0.34 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 BNILDI_22510 ybaB YbaB/EbfC family nucleoid-associated protein
Escherichia coli BL21 0.34 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.62 ECD_00422 DNA-binding protein, putative nucleoid-associated protein
Escherichia coli BW25113 0.34 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.62 b0471 ybaB hypothetical protein (NCBI)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.62 GFF4389 FIG000557: hypothetical protein co-occurring with RecR
Klebsiella michiganensis M5al 0.33 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.51 BWI76_RS06825 nucleoid-associated protein, YbaB/EbfC family
Rahnella sp. WP5 0.33 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 EX31_RS22520 YbaB/EbfC family nucleoid-associated protein
Erwinia tracheiphila SCR3 0.33 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.57 LU632_RS18110 YbaB/EbfC family nucleoid-associated protein
Enterobacter sp. TBS_079 0.33 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.57 MPMX20_01073 Nucleoid-associated protein YbaB
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_01735 glycerol-3-phosphate dehydrogenase 0.54 AO353_00680 nucleoid-associated protein
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 PFLU_RS22425 YbaB/EbfC family nucleoid-associated protein
Enterobacter asburiae PDN3 0.33 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase 0.56 EX28DRAFT_2486 DNA-binding protein, YbaB/EbfC family
Pantoea sp. MT58 0.33 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.60 IAI47_14470 YbaB/EbfC family nucleoid-associated protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.58 Psyr_1826 Conserved hypothetical protein 103
Azospirillum sp. SherDot2 0.33 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.31 MPMX19_02194 Nucleoid-associated protein YbaB
Pseudomonas fluorescens SBW25 0.33 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.55 PFLU_RS22425 YbaB/EbfC family nucleoid-associated protein low > 109
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.58 Psyr_1826 Conserved hypothetical protein 103
Pseudomonas simiae WCS417 0.33 PS417_09000 glycerol-3-phosphate dehydrogenase 0.55 PS417_20810 hypothetical protein
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.55 PfGW456L13_4076 FIG000557: hypothetical protein co-occurring with RecR
Marinobacter adhaerens HP15 0.33 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.54 HP15_1884 protein belonging to uncharacterized protein family UPF0133
Dinoroseobacter shibae DFL-12 0.33 Dshi_3414 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein (RefSeq) 0.39 Dshi_0649 hypothetical protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.32 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.34 PGA1_c30280 DNA-binding protein, YbaB/EbfC family low > 62
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_19795 glycerol-3-phosphate dehydrogenase 0.54 AO356_02505 nucleoid-associated protein
Pseudomonas sp. S08-1 0.32 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.61 OH686_02390 DNA-binding protein, YbaB/EbfC family
Pseudomonas sp. RS175 0.32 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.55 PFR28_01075 Nucleoid-associated protein YbaB
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.54 Pf6N2E2_2327 FIG000557: hypothetical protein co-occurring with RecR
Azospirillum brasilense Sp245 0.32 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.30 AZOBR_RS03875 hypothetical protein
Mycobacterium tuberculosis H37Rv 0.32 Rv2982c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 0.23 Rv3716c Conserved protein low > 58
Pseudomonas putida KT2440 0.32 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.61 PP_4268 nucleoid-associated broad specificity regulator
Pseudomonas stutzeri RCH2 0.32 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.58 Psest_2546 DNA-binding protein, YbaB/EbfC family
Acinetobacter radioresistens SK82 0.30 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.48 MPMX26_01644 Nucleoid-associated protein YbaB
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.55 Pf1N1B4_3863 FIG000557: hypothetical protein co-occurring with RecR
Agrobacterium fabrum C58 0.29 Atu2650 glycerol-3-phosphate dehydrogenase 0.39 Atu0095 hypothetical protein low > 89
Rhodopseudomonas palustris CGA009 0.29 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.37 TX73_003190 YbaB/EbfC family nucleoid-associated protein low > 86
Sinorhizobium meliloti 1021 0.29 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.37 SMc02906 hypothetical protein low > 103
Rhizobium sp. OAE497 0.28 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.35 ABIE40_RS00285 YbaB/EbfC family nucleoid-associated protein
Bosea sp. OAE506 0.26 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.42 ABIE41_RS04030 YbaB/EbfC family nucleoid-associated protein
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0322 Glycerol-3-phosphate dehydrogenase 0.31 Echvi_4060 DNA-binding protein, YbaB/EbfC family
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_05630 glycerol-3-phosphate dehydrogenase 0.31 CA264_04550 nucleoid-associated protein, YbaB/EbfC family low > 74

Not shown: 14 genomes with orthologs for GFF1222 only; 2 genomes with orthologs for GFF4252 only