Conservation of cofitness between Psest_0415 and Psest_0412 in Pseudomonas stutzeri RCH2

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0415 dethiobiotin synthase 1.0 Psest_0412 8-amino-7-oxononanoate synthase 0.88 1
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_14155 dethiobiotin synthetase 0.75 AO356_14140 8-amino-7-oxononanoate synthase 0.94 1
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) 0.78 Pf6N2E2_4761 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.92 3
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) 0.77 Pf1N1B4_2488 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.91 1
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) 0.77 PfGW456L13_1148 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.98 2
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_4683 dethiobiotin synthase 0.78 Psyr_4686 8-amino-7-oxononanoate synthase 0.83 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_4683 dethiobiotin synthase 0.78 Psyr_4686 8-amino-7-oxononanoate synthase 0.69 3
Pseudomonas sp. RS175 0.69 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 0.78 PFR28_04102 8-amino-7-oxononanoate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_07505 dethiobiotin synthetase 0.80 AO353_07520 8-amino-7-oxononanoate synthase 0.97 2
Pseudomonas sp. S08-1 0.68 OH686_10335 dethiobiotin synthase 0.84 OH686_10350 8-amino-7-oxononanoate synthase 0.97 2
Pseudomonas fluorescens SBW25 0.68 PFLU_RS27630 dethiobiotin synthase 0.78 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.83 2
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS27630 dethiobiotin synthase 0.78 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.90 2
Pseudomonas simiae WCS417 0.68 PS417_25985 dethiobiotin synthetase 0.78 PS417_26000 8-amino-7-oxononanoate synthase 0.63 3
Pseudomonas putida KT2440 0.67 PP_0366 dethiobiotin synthetase 0.75 PP_0363 8-amino-7-oxononanoate synthase 0.92 1
Shewanella loihica PV-4 0.54 Shew_1722 dethiobiotin synthase (RefSeq) 0.33 Shew_1720 8-amino-7-oxononanoate synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.52 SO2737 bioD dethiobiotin synthase (NCBI ptt file) 0.35 SO2739 bioF 8-amino-7-oxononanoate synthase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.51 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) 0.33 Shewana3_2518 aminotransferase, class I and II (RefSeq) — —
Serratia liquefaciens MT49 0.45 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD 0.36 IAI46_06530 8-amino-7-oxononanoate synthase low > 86
Escherichia coli ECRC99 0.45 KEDOAH_21525 bioD dethiobiotin synthase 0.35 KEDOAH_21515 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC98 0.45 JDDGAC_10020 bioD dethiobiotin synthase 0.36 JDDGAC_10030 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC101 0.45 MCAODC_25600 bioD dethiobiotin synthase 0.36 MCAODC_25610 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 0.35 OHPLBJKB_02937 8-amino-7-oxononanoate synthase low > 73
Escherichia coli Nissle 1917 0.45 ECOLIN_RS04145 dethiobiotin synthase 0.35 ECOLIN_RS04135 8-amino-7-oxononanoate synthase — —
Marinobacter adhaerens HP15 0.45 HP15_2482 dethiobiotin synthetase 0.52 HP15_2485 8-amino-7-oxononanoate synthase 0.52 14
Escherichia fergusonii Becca 0.45 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 0.35 EFB2_03329 8-amino-7-oxononanoate synthase low > 86
Escherichia coli BL21 0.45 ECD_00745 dethiobiotin synthetase 0.35 ECD_00743 8-amino-7-oxononanoate synthase low > 60
Escherichia coli ECRC102 0.45 NIAGMN_04430 bioD dethiobiotin synthase 0.36 NIAGMN_04440 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC101 0.45 OKFHMN_06385 bioD dethiobiotin synthase 0.36 OKFHMN_06395 bioF 8-amino-7-oxononanoate synthase — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2213 dethiobiotin synthase 0.39 EX28DRAFT_2215 8-amino-7-oxononanoate synthase low > 76
Dechlorosoma suillum PS 0.45 Dsui_2884 dethiobiotin synthase 0.46 Dsui_2881 8-amino-7-oxononanoate synthase 0.90 2
Escherichia coli BW25113 0.44 b0778 bioD dethiobiotin synthetase (NCBI) 0.35 b0776 bioF 8-amino-7-oxononanoate synthase (NCBI) 0.45 2
Dickeya dianthicola 67-19 0.44 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD 0.38 HGI48_RS08680 8-amino-7-oxononanoate synthase 0.75 1
Pectobacterium carotovorum WPP14 0.44 HER17_RS13445 dethiobiotin synthase 0.37 HER17_RS13455 8-amino-7-oxononanoate synthase low > 75
Escherichia coli ECOR38 0.44 HEPCGN_01655 bioD dethiobiotin synthase 0.35 HEPCGN_01645 bioF 8-amino-7-oxononanoate synthase low > 85
Escherichia coli ECOR27 0.44 NOLOHH_22755 bioD dethiobiotin synthase 0.35 NOLOHH_22765 bioF 8-amino-7-oxononanoate synthase low > 57
Klebsiella michiganensis M5al 0.44 BWI76_RS08775 dethiobiotin synthase 0.34 BWI76_RS08765 8-amino-7-oxononanoate synthase 0.19 47
Enterobacter sp. TBS_079 0.44 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 0.40 MPMX20_01404 8-amino-7-oxononanoate synthase 0.29 6
Dickeya dianthicola ME23 0.43 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD 0.38 DZA65_RS08970 8-amino-7-oxononanoate synthase 0.53 32
Escherichia coli ECRC62 0.43 BNILDI_21025 bioD dethiobiotin synthase 0.36 BNILDI_21035 bioF 8-amino-7-oxononanoate synthase — —
Pantoea sp. MT58 0.43 IAI47_13515 ATP-dependent dethiobiotin synthetase BioD 0.32 IAI47_13525 8-amino-7-oxononanoate synthase low > 76
Dickeya dadantii 3937 0.43 DDA3937_RS08525 ATP-dependent dethiobiotin synthetase BioD 0.38 DDA3937_RS08515 8-amino-7-oxononanoate synthase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) 0.37 GFF672 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 78
Rahnella sp. WP5 0.42 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD 0.35 EX31_RS23700 8-amino-7-oxononanoate synthase low > 89
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS12700 dethiobiotin synthase 0.44 ABZR86_RS15835 8-amino-7-oxononanoate synthase low > 74
Lysobacter sp. OAE881 0.42 ABIE51_RS17990 dethiobiotin synthase 0.42 ABIE51_RS01145 8-amino-7-oxononanoate synthase low > 62
Shewanella amazonensis SB2B 0.41 Sama_1441 bioD dithiobiotin synthetase (RefSeq) 0.32 Sama_0098 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_16455 bioD dethiobiotin synthase 0.41 OKGIIK_13655 bioF 8-amino-7-oxononanoate synthase low > 52
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_05660 dethiobiotin synthase 0.39 CSW01_05650 8-amino-7-oxononanoate synthase low > 62
Erwinia tracheiphila SCR3 0.40 LU632_RS09145 bioD dethiobiotin synthase 0.37 LU632_RS09135 bioF 8-amino-7-oxononanoate synthase — —
Alteromonas macleodii MIT1002 0.39 MIT1002_01382 ATP-dependent dethiobiotin synthetase BioD 1 0.36 MIT1002_01380 8-amino-7-oxononanoate synthase 0.98 1
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS07180 dethiobiotin synthase 0.43 LRK54_RS10255 8-amino-7-oxononanoate synthase low > 59
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0869 dethiobiotin synthase 0.46 B158DRAFT_0865 8-amino-7-oxononanoate synthase — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS06915 dethiobiotin synthase 0.43 LRK55_RS09895 8-amino-7-oxononanoate synthase low > 63
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF3994 Dethiobiotin synthetase (EC 6.3.3.3) 0.34 GFF3995 8-amino-7-oxononanoate synthase (EC 2.3.1.47) — —
Variovorax sp. SCN45 0.37 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) 0.33 GFF144 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 127
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS12255 dethiobiotin synthetase 0.37 HSERO_RS12245 8-amino-7-oxononanoate synthase 0.37 3
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS00825 dethiobiotin synthase 0.35 RALBFv3_RS00820 8-amino-7-oxononanoate synthase — —
Ralstonia solanacearum UW163 0.37 UW163_RS14160 dethiobiotin synthase 0.35 UW163_RS14155 8-amino-7-oxononanoate synthase — —
Variovorax sp. OAS795 0.36 ABID97_RS16255 dethiobiotin synthase 0.35 ABID97_RS16260 8-amino-7-oxononanoate synthase — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS02155 dithiobiotin synthetase 0.37 BPHYT_RS02160 8-amino-7-oxononanoate synthase 0.53 1
Ralstonia solanacearum PSI07 0.35 RPSI07_RS16695 dethiobiotin synthase 0.34 RPSI07_RS16700 8-amino-7-oxononanoate synthase low > 81
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS12345 dethiobiotin synthase 0.35 ABZR87_RS12340 8-amino-7-oxononanoate synthase 0.53 2
Ralstonia solanacearum GMI1000 0.34 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD 0.35 RS_RS07435 8-amino-7-oxononanoate synthase — —
Acidovorax sp. GW101-3H11 0.33 Ac3H11_3829 Dethiobiotin synthetase (EC 6.3.3.3) 0.34 Ac3H11_3830 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 79
Paraburkholderia graminis OAS925 0.33 ABIE53_000578 dethiobiotin synthetase 0.38 ABIE53_000579 8-amino-7-oxononanoate synthase 0.94 1
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) 0.39 Xcc-8004.504.1 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.82 2
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_02096 dethiobiotin synthetase 0.38 H281DRAFT_02095 8-amino-7-oxononanoate synthase 0.77 2
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS01090 dethiobiotin synthase 0.37 QEN71_RS01095 8-amino-7-oxononanoate synthase — —
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS00935 dethiobiotin synthetase 0.34 RR42_RS00930 8-amino-7-oxononanoate synthase — —
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS17975 ATP-dependent dethiobiotin synthetase BioD 0.31 HMPREF1058_RS01195 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Agrobacterium fabrum C58 0.17 Atu3999 dithiobiotin synthetase 0.26 Atu2613 5-aminolevulinate synthase — —
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS15515 ATP-dependent dethiobiotin synthetase BioD 0.30 HMPREF1181_RS10950 glycine C-acetyltransferase — —
Synechococcus elongatus PCC 7942 0.16 Synpcc7942_0030 bioD dethiobiotin synthase 0.29 Synpcc7942_0027 bioF 8-amino-7-oxononanoate synthase — —
Parabacteroides merdae CL09T00C40 0.16 HMPREF1078_RS15275 dethiobiotin synthase 0.32 HMPREF1078_RS16170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Methanococcus maripaludis S2 0.16 MMP_RS08095 dethiobiotin synthase 0.30 MMP_RS08100 8-amino-7-oxononanoate synthase 0.97 3
Bacteroides ovatus ATCC 8483 0.16 BACOVA_00874 dethiobiotin synthase 0.29 BACOVA_00211 glycine C-acetyltransferase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.16 BT1446 dethiobiotin synthetase (NCBI ptt file) 0.30 BT1371 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) low > 81
Pedobacter sp. GW460-11-11-14-LB5 0.15 CA265_RS09760 dethiobiotin synthase 0.31 CA265_RS13580 8-amino-7-oxononanoate synthase low > 88
Rhizobium sp. OAE497 0.15 ABIE40_RS21065 dethiobiotin synthase 0.31 ABIE40_RS12730 glycine C-acetyltransferase low > 107
Castellaniella sp019104865 MT123 0.14 ABCV34_RS15285 dethiobiotin synthase 0.30 ABCV34_RS15295 8-amino-7-oxononanoate synthase low > 48
Phaeobacter inhibens DSM 17395 0.14 PGA1_c09140 dethiobiotin synthetase BioD 0.29 PGA1_c34330 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.13 CA264_02415 dethiobiotin synthase 0.32 CA264_07040 8-amino-7-oxononanoate synthase low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.12 DVU2565 bioD dethiobiotin synthetase (TIGR) 0.19 DVU2564 bioF 8-amino-7-oxononanoate synthase (Dmitry Rodionov) 0.42 7
Rhodopseudomonas palustris CGA009 0.12 TX73_015410 dethiobiotin synthase 0.29 TX73_007985 5-aminolevulinate synthase low > 86

Not shown: 0 genomes with orthologs for Psest_0415 only; 17 genomes with orthologs for Psest_0412 only