Conservation of cofitness between HP15_293 and HP15_3622 in Marinobacter adhaerens HP15

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_293 DNA polymerase I 1.0 HP15_3622 peroxiredoxin 0.43 5
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0499 DNA polymerase I (EC 2.7.7.7) 0.85 B158DRAFT_0278 peroxiredoxin low > 40
Alteromonas macleodii MIT1002 0.58 MIT1002_00014 DNA polymerase I 0.82 MIT1002_01784 Alkyl hydroperoxide reductase subunit C low > 70
Pseudomonas putida KT2440 0.58 PP_0123 DNA polymerase I, 5 0.73 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit low > 96
Shewanella amazonensis SB2B 0.58 Sama_0093 DNA-directed DNA polymerase (RefSeq) 0.68 Sama_0617 alkyl hydroperoxide reductase, C subunit (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.58 Psest_4219 DNA polymerase I 0.61 Psest_1133 peroxiredoxin — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_10930 DNA polymerase I 0.71 AO353_26965 alkyl hydroperoxide reductase 0.47 14
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS17015 DNA polymerase I 0.70 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C low > 74
Shewanella loihica PV-4 0.57 Shew_3714 DNA polymerase I (RefSeq) 0.71 Shew_0792 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) low > 60
Pseudomonas sp. S08-1 0.57 OH686_12215 DNA polymerase I 0.62 OH686_18680 peroxiredoxin low > 80
Rhodanobacter denitrificans MT42 0.57 LRK55_RS06585 DNA polymerase I 0.73 LRK55_RS00480 alkyl hydroperoxide reductase subunit C low > 63
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS06840 DNA polymerase I 0.73 LRK54_RS00705 alkyl hydroperoxide reductase subunit C low > 59
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) 0.72 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.46 12
Shewanella sp. ANA-3 0.57 Shewana3_4109 DNA polymerase I (RefSeq) 0.69 Shewana3_3325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_11465 DNA polymerase I 0.72 AO356_22805 alkyl hydroperoxide reductase 0.33 37
Shewanella oneidensis MR-1 0.56 SO4669 polA DNA polymerase I (NCBI ptt file) 0.69 SO0958 ahpC alkyl hydroperoxide reductase, C subunit (NCBI ptt file) — —
Pseudomonas simiae WCS417 0.56 PS417_00405 DNA polymerase I 0.72 PS417_14045 alkyl hydroperoxide reductase low > 88
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_00560 DNA polymerase I 0.31 CSW01_03815 peroxidase low > 62
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) 0.71 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) — —
Pseudomonas fluorescens SBW25 0.56 PFLU_RS00395 DNA polymerase I 0.72 PFLU_RS14570 peroxiredoxin low > 109
Pseudomonas sp. RS175 0.56 PFR28_04624 DNA polymerase I 0.72 PFR28_02482 Alkyl hydroperoxide reductase C low > 88
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS00395 DNA polymerase I 0.72 PFLU_RS14570 peroxiredoxin low > 109
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_16785 polA DNA polymerase I 0.73 OKGIIK_06555 ahpC alkyl hydroperoxide reductase subunit C low > 52
Erwinia tracheiphila SCR3 0.56 LU632_RS23870 polA DNA polymerase I 0.36 LU632_RS18475 peroxiredoxin C — —
Serratia liquefaciens MT49 0.56 IAI46_24985 DNA polymerase I 0.36 IAI46_04825 peroxiredoxin C low > 86
Pantoea sp. MT58 0.55 IAI47_00430 DNA polymerase I 0.80 IAI47_06790 alkyl hydroperoxide reductase subunit C low > 76
Pectobacterium carotovorum WPP14 0.55 HER17_RS21470 DNA polymerase I 0.79 HER17_RS02545 alkyl hydroperoxide reductase subunit C — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) 0.71 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.38 22
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS17885 DNA polymerase I 0.68 QEN71_RS13380 alkyl hydroperoxide reductase subunit C — —
Rahnella sp. WP5 0.55 EX31_RS15905 DNA polymerase I 0.33 EX31_RS22080 peroxiredoxin C 0.45 23
Dickeya dadantii 3937 0.55 DDA3937_RS00105 DNA polymerase I 0.77 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C — —
Escherichia coli BW25113 0.54 b3863 polA DNA polymerase I (NCBI) 0.81 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) low > 76
Escherichia coli BL21 0.54 ECD_03749 5 0.81 ECD_00574 alkyl hydroperoxide reductase, C22 subunit — —
Escherichia coli ECOR27 0.54 NOLOHH_06280 polA DNA polymerase I 0.81 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli ECRC62 0.54 BNILDI_05250 polA DNA polymerase I 0.81 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli ECRC101 0.54 MCAODC_04650 polA DNA polymerase I 0.81 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli ECRC98 0.54 JDDGAC_17775 polA DNA polymerase I 0.81 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli ECRC101 0.54 OKFHMN_14150 polA DNA polymerase I 0.81 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli ECRC99 0.54 KEDOAH_14000 polA DNA polymerase I 0.81 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF2216 DNA polymerase I (EC 2.7.7.7) 0.81 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 78
Escherichia coli ECRC102 0.54 NIAGMN_11905 polA DNA polymerase I 0.81 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia fergusonii Becca 0.54 EFB2_04753 DNA polymerase I 0.81 EFB2_03486 Alkyl hydroperoxide reductase C — —
Escherichia coli ECOR38 0.54 HEPCGN_12785 polA DNA polymerase I 0.81 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS22270 DNA polymerase I 0.81 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_04189 DNA polymerase I 0.81 OHPLBJKB_03100 Alkyl hydroperoxide reductase C — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0270 DNA polymerase I 0.72 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Dickeya dianthicola ME23 0.54 DZA65_RS22235 DNA polymerase I 0.77 DZA65_RS02565 alkyl hydroperoxide reductase subunit C — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0270 DNA polymerase I 0.72 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Dickeya dianthicola 67-19 0.54 HGI48_RS21260 DNA polymerase I 0.77 HGI48_RS02460 alkyl hydroperoxide reductase subunit C — —
Klebsiella michiganensis M5al 0.54 BWI76_RS00355 DNA polymerase I 0.81 BWI76_RS07940 alkyl hydroperoxide reductase subunit C low > 92
Enterobacter asburiae PDN3 0.54 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) 0.81 EX28DRAFT_2350 peroxiredoxin — —
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.5105.1 DNA polymerase I (EC 2.7.7.7) 0.60 Xcc-8004.4221.1 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) — —
Enterobacter sp. TBS_079 0.54 MPMX20_04601 DNA polymerase I 0.81 MPMX20_01271 Alkyl hydroperoxide reductase C low > 85
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS02260 DNA polymerase I 0.68 HSERO_RS21540 alkyl hydroperoxide reductase subunit C low > 78
Paraburkholderia graminis OAS925 0.53 ABIE53_004852 DNA polymerase-1 0.69 ABIE53_005904 peroxiredoxin low > 113
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS33610 DNA polymerase I 0.68 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C — —
Lysobacter sp. OAE881 0.53 ABIE51_RS02010 DNA polymerase I 0.75 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C low > 62
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_06022 DNA polymerase I 0.68 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) low > 103
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS15680 DNA polymerase I 0.60 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C low > 80
Dechlorosoma suillum PS 0.52 Dsui_0459 DNA polymerase I 0.61 Dsui_1901 peroxiredoxin low > 51
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS15050 DNA polymerase I 0.28 RR42_RS07870 alkyl hydroperoxide reductase low > 128
Ralstonia solanacearum UW163 0.51 UW163_RS09920 DNA polymerase I 0.59 UW163_RS22815 peroxiredoxin — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS03750 DNA polymerase I 0.59 RALBFv3_RS22270 peroxiredoxin low > 76
Ralstonia solanacearum GMI1000 0.50 RS_RS11195 DNA polymerase I 0.61 RS_RS18335 peroxiredoxin low > 80
Ralstonia solanacearum PSI07 0.50 RPSI07_RS13480 DNA polymerase I 0.60 RPSI07_RS00930 peroxiredoxin 0.51 34
Variovorax sp. SCN45 0.50 GFF4006 DNA polymerase I (EC 2.7.7.7) 0.57 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) low > 127
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) 0.59 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) — —
Variovorax sp. OAS795 0.48 ABID97_RS09180 DNA polymerase I 0.57 ABID97_RS10800 alkyl hydroperoxide reductase subunit C low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF5584 DNA polymerase I (EC 2.7.7.7) 0.58 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 90
Castellaniella sp019104865 MT123 0.48 ABCV34_RS02195 DNA polymerase I 0.69 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C low > 48
Acinetobacter radioresistens SK82 0.48 MPMX26_00574 DNA polymerase I 0.75 MPMX26_02009 Alkyl hydroperoxide reductase C low > 36
Azospirillum brasilense Sp245 0.38 AZOBR_RS30685 DNA polymerase 0.75 AZOBR_RS20510 alkyl hydroperoxide reductase subunit C low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS13840 DNA polymerase I 0.77 A4249_RS04540 alkyl hydroperoxide reductase subunit C — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_03577 DNA polymerase I 0.77 CCNA_03012 peroxiredoxin — —
Caulobacter crescentus NA1000 0.37 CCNA_03577 DNA polymerase I 0.77 CCNA_03012 peroxiredoxin 0.46 45
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_1032 DNA polymerase I 0.32 Echvi_1832 Peroxiredoxin low > 79
Bacteroides ovatus ATCC 8483 0.36 BACOVA_01357 DNA-directed DNA polymerase 0.61 BACOVA_02068 peroxiredoxin low > 94
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_16535 DNA polymerase I 0.34 CA264_00400 alkyl hydroperoxide reductase — —
Bacteroides thetaiotaomicron VPI-5482 0.36 BT3260 DNA polymerase I (NCBI ptt file) 0.62 BT2812 alkyl hydroperoxide reductase C22 protein (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS02070 DNA polymerase I 0.64 HMPREF1181_RS02155 peroxiredoxin low > 56
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7) 0.79 Ga0059261_0155 peroxiredoxin 0.62 1
Azospirillum sp. SherDot2 0.36 MPMX19_04869 DNA polymerase I 0.73 MPMX19_05835 Alkyl hydroperoxide reductase C low > 112
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS19630 DNA polymerase I 0.23 CA265_RS21370 peroxiredoxin low > 88
Rhodospirillum rubrum S1H 0.35 Rru_A3514 DNA polymerase A (NCBI) 0.72 Rru_A1418 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) — —
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS06335 DNA polymerase I 0.65 HMPREF1078_RS04205 alkyl hydroperoxide reductase subunit C low > 61
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_0194 polA DNA polymerase I 0.39 Synpcc7942_2309 2-cys prx thioredoxin peroxidase — —
Fusobacterium nucleatum SB010 0.25 HUW76_04385 DNA polymerase I 0.54 HUW76_10130 peroxiredoxin low > 35
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_1713 DNA polymerase I (RefSeq) 0.47 DvMF_0219 Peroxiredoxin (RefSeq) — —

Not shown: 8 genomes with orthologs for HP15_293 only; 4 genomes with orthologs for HP15_3622 only