| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF1858 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) | 1.0 | GFF2989 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | 0.59 | 4 |
| Escherichia coli ECRC62 | 0.82 | BNILDI_13535 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | BNILDI_10035 | recJ | single-stranded-DNA-specific exonuclease RecJ | low | > 75 |
| Escherichia coli ECOR27 | 0.82 | NOLOHH_14620 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | NOLOHH_11505 | recJ | single-stranded-DNA-specific exonuclease RecJ | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.82 | OHPLBJKB_01458 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.92 | OHPLBJKB_00823 | | Single-stranded-DNA-specific exonuclease RecJ | low | > 73 |
| Escherichia coli BL21 | 0.82 | ECD_02179 | | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent | 0.93 | ECD_02724 | | ssDNA exonuclease, 5 | low | > 61 |
| Escherichia coli ECOR38 | 0.81 | HEPCGN_22210 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | HEPCGN_18870 | recJ | single-stranded-DNA-specific exonuclease RecJ | low | > 87 |
| Escherichia fergusonii Becca | 0.81 | EFB2_01603 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.93 | EFB2_01009 | | Single-stranded-DNA-specific exonuclease RecJ | low | > 86 |
| Escherichia coli ECRC99 | 0.81 | KEDOAH_05200 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | KEDOAH_08560 | recJ | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Escherichia coli ECRC101 | 0.81 | MCAODC_14035 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | MCAODC_10100 | recJ | single-stranded-DNA-specific exonuclease RecJ | low | > 87 |
| Escherichia coli ECRC98 | 0.81 | JDDGAC_26960 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | JDDGAC_23220 | recJ | single-stranded-DNA-specific exonuclease RecJ | low | > 86 |
| Escherichia coli ECRC102 | 0.81 | NIAGMN_20765 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | NIAGMN_17345 | recJ | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Escherichia coli ECRC100 | 0.81 | OKFHMN_22995 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | OKFHMN_19580 | recJ | single-stranded-DNA-specific exonuclease RecJ | low | > 80 |
| Escherichia coli BW25113 | 0.80 | b2253 | arnB | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) | 0.93 | b2892 | recJ | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.80 | ECOLIN_RS13125 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.93 | ECOLIN_RS16115 | | single-stranded-DNA-specific exonuclease RecJ | low | > 55 |
| Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_4082 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | 0.89 | EX28DRAFT_2943 | | single-stranded-DNA-specific exonuclease RecJ | low | > 76 |
| Enterobacter sp. TBS_079 | 0.79 | MPMX20_04380 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.87 | MPMX20_03751 | | Single-stranded-DNA-specific exonuclease RecJ | low | > 85 |
| Klebsiella michiganensis M5al | 0.77 | BWI76_RS26485 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.89 | BWI76_RS23805 | | ssDNA exonuclease RecJ | low | > 92 |
| Erwinia tracheiphila SCR3 | 0.76 | LU632_RS16495 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.72 | LU632_RS05985 | recJ | single-stranded-DNA-specific exonuclease RecJ | low | > 74 |
| Dickeya dadantii 3937 | 0.76 | DDA3937_RS21390 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.75 | DDA3937_RS03310 | | single-stranded-DNA-specific exonuclease RecJ | low | > 74 |
| Dickeya dianthicola 67-19 | 0.75 | HGI48_RS21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.75 | HGI48_RS03450 | | single-stranded-DNA-specific exonuclease RecJ | low | > 71 |
| Dickeya dianthicola ME23 | 0.75 | DZA65_RS22610 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.75 | DZA65_RS03495 | | single-stranded-DNA-specific exonuclease RecJ | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS06520 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.70 | HER17_RS17880 | | single-stranded-DNA-specific exonuclease RecJ | low | > 75 |
| Pantoea sp. MT58 | 0.71 | IAI47_21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.76 | IAI47_03830 | | single-stranded-DNA-specific exonuclease RecJ | low | > 76 |
| Rahnella sp. WP5 | 0.68 | EX31_RS14020 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.76 | EX31_RS13470 | | single-stranded-DNA-specific exonuclease RecJ | low | > 89 |
| Serratia liquefaciens MT49 | 0.68 | IAI46_11015 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.78 | IAI46_20720 | | single-stranded-DNA-specific exonuclease RecJ | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.67 | AO353_25530 | | UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase | 0.55 | AO353_04320 | | single-stranded-DNA-specific exonuclease RecJ | low | > 101 |
| Pseudomonas syringae pv. syringae B728a | 0.64 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | 0.58 | Psyr_1298 | | exonuclease RecJ | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.64 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | 0.58 | Psyr_1298 | | exonuclease RecJ | low | > 86 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS02145 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.40 | ABID97_RS22940 | | single-stranded-DNA-specific exonuclease RecJ | low | > 91 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS15735 | | pyridoxal phosphate-dependent aminotransferase | 0.42 | RR42_RS06090 | | single-stranded DNA exonuclease | low | > 128 |
| Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_10755 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.41 | OKGIIK_06995 | recJ | single-stranded-DNA-specific exonuclease RecJ | low | > 52 |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS17515 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.41 | RPSI07_RS18620 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.32 | H281DRAFT_00805 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.39 | H281DRAFT_00488 | | exonuclease RecJ | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.32 | DVU3010 | lpsC | aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) | 0.22 | DVU0904 | recJ | single-stranded-DNA-specific exonuclease RecJ (TIGR) | low | > 55 |
| Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS11420 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.40 | ABZR87_RS10395 | | single-stranded-DNA-specific exonuclease RecJ | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.32 | RALBFv3_RS15850 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.41 | RALBFv3_RS14740 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Ralstonia solanacearum UW163 | 0.32 | UW163_RS13295 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.41 | UW163_RS12210 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS08930 | | aminotransferase DegT | 0.39 | BPHYT_RS12730 | | single-stranded DNA exonuclease | — | — |
| Paraburkholderia graminis OAS925 | 0.31 | ABIE53_002021 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.39 | ABIE53_002771 | | single-stranded-DNA-specific exonuclease | — | — |
| Herbaspirillum seropedicae SmR1 | 0.31 | HSERO_RS10435 | | aminotransferase DegT | 0.42 | HSERO_RS13965 | | single-stranded DNA exonuclease | — | — |
| Ralstonia solanacearum GMI1000 | 0.31 | RS_RS06630 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.41 | RS_RS05550 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS22430 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.40 | QEN71_RS05835 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Rhodospirillum rubrum S1H | 0.31 | Rru_A2746 | | DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) | 0.24 | Rru_A2408 | | RecJ exonuclease (NCBI) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.30 | AMB_RS00560 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.22 | AMB_RS18875 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS28905 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.56 | PFLU_RS24515 | | single-stranded-DNA-specific exonuclease RecJ | low | > 109 |
| Pseudomonas simiae WCS417 | 0.30 | PS417_27245 | | aminotransferase DegT | 0.57 | PS417_22855 | | ssDNA exonuclease RecJ | low | > 88 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_00234 | | WecE-family cell wall biogenesis enzyme | 0.18 | CCNA_01450 | | single-stranded-DNA-specific exonuclease recJ | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_00234 | | WecE-family cell wall biogenesis enzyme | 0.18 | CCNA_01450 | | single-stranded-DNA-specific exonuclease recJ | — | — |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS28905 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.56 | PFLU_RS24515 | | single-stranded-DNA-specific exonuclease RecJ | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_3586 | | DegT/DnrJ/EryC1/StrS aminotransferase | 0.56 | Pf1N1B4_3020 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | low | > 87 |
| Shewanella sp. ANA-3 | 0.28 | Shewana3_1303 | | polysaccharide biosynthesis protein (RefSeq) | 0.57 | Shewana3_3329 | | single-stranded-DNA-specific exonuclease RecJ (RefSeq) | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_1811 | | UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase | 0.53 | Psest_1544 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Pseudomonas sp. RS175 | 0.28 | PFR28_00919 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.55 | PFR28_00339 | | Single-stranded-DNA-specific exonuclease RecJ | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.28 | Pf6N2E2_2610 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | 0.56 | Pf6N2E2_3137 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | low | > 103 |
| Marinobacter adhaerens HP15 | 0.27 | HP15_2398 | | aminotransferase, DegT/DnrJ/EryC1/StrS family | 0.50 | HP15_766 | | bacterial RecJ exonuclease | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.27 | PfGW456L13_4375 | | perosamine synthetase | 0.56 | PfGW456L13_1730 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | low | > 87 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.26 | CA264_07955 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.23 | CA264_17545 | | single-stranded-DNA-specific exonuclease RecJ | low | > 74 |
| Dechlorosoma suillum PS | 0.26 | Dsui_0082 | | UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase | 0.43 | Dsui_2860 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Shewanella loihica PV-4 | 0.26 | Shew_1319 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | 0.57 | Shew_0772 | | single-stranded-DNA-specific exonuclease RecJ (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.26 | MIT1002_01078 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.54 | MIT1002_00788 | | Single-stranded-DNA-specific exonuclease RecJ | low | > 70 |
| Shewanella oneidensis MR-1 | 0.25 | SO3270 | | polysaccharide biosynthesis protein (NCBI ptt file) | 0.57 | SO0952 | recJ | single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) | low | > 76 |
| Desulfovibrio vulgaris Miyazaki F | 0.24 | DvMF_1911 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | 0.22 | DvMF_1134 | | single-stranded-DNA-specific exonuclease RecJ (RefSeq) | low | > 51 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.24 | CA265_RS01760 | | aminotransferase DegT | 0.25 | CA265_RS25225 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.24 | CSW01_01285 | | perosamine synthetase | 0.63 | CSW01_12240 | | single-stranded-DNA-specific exonuclease RecJ | low | > 62 |
| Sphingomonas koreensis DSMZ 15582 | 0.23 | Ga0059261_3110 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | 0.21 | Ga0059261_3089 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_03400 | | aminotransferase DegT | 0.56 | AO356_06345 | | single-stranded-DNA-specific exonuclease RecJ | low | > 104 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.22 | BT0612 | | putative aminotransferase (NCBI ptt file) | 0.24 | BT3939 | | single-stranded-DNA-specific exonuclease recJ (NCBI ptt file) | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.22 | LRK54_RS05585 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.41 | LRK54_RS00315 | | single-stranded-DNA-specific exonuclease RecJ | low | > 59 |
| Phaeobacter inhibens DSM 17395 | 0.22 | PGA1_c05070 | | putative pyridoxal-phosphate-dependent aminotransferase | 0.23 | PGA1_c08630 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Acinetobacter radioresistens SK82 | 0.21 | MPMX26_00061 | | GDP-perosamine synthase | 0.42 | MPMX26_02917 | | Single-stranded-DNA-specific exonuclease RecJ | low | > 36 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.21 | ABZR88_RS08945 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.24 | ABZR88_RS18635 | | single-stranded-DNA-specific exonuclease RecJ | low | > 71 |
| Rhodopseudomonas palustris CGA009 | 0.21 | TX73_020615 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.23 | TX73_012960 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.21 | ABZR86_RS18520 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.43 | ABZR86_RS02800 | | single-stranded-DNA-specific exonuclease RecJ | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.21 | Xcc-8004.4490.1 | | Lipopolysaccharide biosynthesis protein RffA | 0.44 | Xcc-8004.2909.1 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | low | > 74 |
| Variovorax sp. SCN45 | 0.21 | GFF6873 | | Aminotransferase, DegT/DnrJ/EryC1/StrS family | 0.40 | GFF6700 | | Single-stranded-DNA-specific exonuclease RecJ | low | > 127 |
| Rhodanobacter denitrificans MT42 | 0.20 | LRK55_RS04940 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.18 | LRK55_RS18310 | | DHHA1 domain-containing protein | low | > 63 |
| Sinorhizobium meliloti 1021 | 0.19 | SM_b21248 | | aminotransferase | 0.20 | SMc00292 | | single-stranded-DNA-specific exonuclease | — | — |
| Phocaeicola dorei CL03T12C01 | 0.19 | ABI39_RS13755 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.24 | ABI39_RS10550 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.18 | A4249_RS13795 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.17 | A4249_RS05895 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Bacteroides ovatus ATCC 8483 | 0.17 | BACOVA_03734 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.24 | BACOVA_01165 | | single-stranded-DNA-specific exonuclease RecJ | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.17 | HMPREF1058_RS03380 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.24 | HMPREF1058_RS14835 | | single-stranded-DNA-specific exonuclease RecJ | low | > 67 |
| Acidovorax sp. GW101-3H11 | 0.17 | Ac3H11_1545 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | 0.41 | Ac3H11_1746 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.14 | Dshi_2228 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | 0.21 | Dshi_2275 | | single-stranded-DNA-specific exonuclease RecJ (RefSeq) | — | — |
| Bacteroides stercoris CC31F | 0.14 | HMPREF1181_RS14960 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.24 | HMPREF1181_RS06545 | | single-stranded-DNA-specific exonuclease RecJ | low | > 56 |
Not shown: 4 genomes with orthologs for GFF1858 only; 12 genomes with orthologs for GFF2989 only