Conservation of cofitness between PS417_23250 and PS417_14065 in Pseudomonas simiae WCS417

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase 1.0 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.43 6
Pseudomonas fluorescens SBW25 0.99 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 1.00 PFLU_RS14550 UTP--glucose-1-phosphate uridylyltransferase GalU low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 1.00 PFLU_RS14550 UTP--glucose-1-phosphate uridylyltransferase GalU low > 109
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_3005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.91 Pf1N1B4_5015 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_15785 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.94 AO353_26975 UTP--glucose-1-phosphate uridylyltransferase — —
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.91 PfGW456L13_2923 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) low > 87
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_06695 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.91 AO356_22795 UTP--glucose-1-phosphate uridylyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3199 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.91 Pf6N2E2_445 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) low > 103
Pseudomonas sp. RS175 0.91 PFR28_00276 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.92 PFR28_02484 UTP--glucose-1-phosphate uridylyltransferase 0.32 13
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_1227 Queuosine biosynthesis protein 0.87 Psyr_2980 UDP-glucose pyrophosphorylase 0.35 53
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_1227 Queuosine biosynthesis protein 0.87 Psyr_2980 UDP-glucose pyrophosphorylase low > 86
Pseudomonas putida KT2440 0.89 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.91 PP_3821 UTP-glucose-1-phosphate uridylyltransferase 0.27 91
Pseudomonas sp. S08-1 0.85 OH686_17425 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.87 OH686_01620 UTP--glucose-1-phosphate uridylyltransferase low > 80
Pseudomonas stutzeri RCH2 0.85 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.87 Psest_2232 UTP-glucose-1-phosphate uridylyltransferase low > 67
Shewanella sp. ANA-3 0.73 Shewana3_1434 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) 0.39 Shewana3_2782 UDP-glucose pyrophosphorylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.73 SO3114 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) 0.38 SO1665 galU UTP-glucose-1-phosphate uridylyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.73 Shew_2338 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase (RefSeq) 0.37 Shew_1434 UTP-glucose-1-phosphate uridylyltransferase GalU (RefSeq) — —
Rahnella sp. WP5 0.72 EX31_RS22090 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 EX31_RS11525 UTP--glucose-1-phosphate uridylyltransferase GalU low > 89
Shewanella amazonensis SB2B 0.72 Sama_2194 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) 0.39 Sama_2223 UTP--glucose-1-phosphate uridylyltransferase (RefSeq) low > 62
Serratia liquefaciens MT49 0.72 IAI46_04835 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.39 IAI46_08120 UTP--glucose-1-phosphate uridylyltransferase GalU low > 86
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_03840 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.74 CSW01_02085 UTP--glucose-1-phosphate uridylyltransferase low > 62
Erwinia tracheiphila SCR3 0.71 LU632_RS18485 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.35 LU632_RS12920 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Pantoea sp. MT58 0.71 IAI47_14810 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.37 IAI47_09030 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_2566 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.36 EX28DRAFT_0862 UTP--glucose-1-phosphate uridylyltransferase — —
Dickeya dianthicola ME23 0.71 DZA65_RS05850 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.38 DZA65_RS10830 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Dickeya dadantii 3937 0.71 DDA3937_RS05465 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.38 DDA3937_RS10345 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Dickeya dianthicola 67-19 0.71 HGI48_RS05525 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.38 HGI48_RS10355 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli ECRC99 0.70 KEDOAH_19455 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 KEDOAH_25585 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli ECRC102 0.70 NIAGMN_06565 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 NIAGMN_27645 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03271 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.36 OHPLBJKB_02449 UTP--glucose-1-phosphate uridylyltransferase — —
Escherichia coli BL21 0.70 ECD_00353 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.36 ECD_01212 glucose-1-phosphate uridylyltransferase — —
Escherichia coli BW25113 0.70 b0405 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) 0.36 b1236 galU glucose-1-phosphate uridylyltransferase (NCBI) low > 76
Klebsiella michiganensis M5al 0.70 BWI76_RS06295 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.36 BWI76_RS17270 UTP--glucose-1-phosphate uridylyltransferase — —
Escherichia coli ECRC101 0.70 OKFHMN_08510 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 OKFHMN_28590 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli ECRC98 0.70 JDDGAC_12165 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 JDDGAC_05985 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli ECRC101 0.70 MCAODC_27735 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 MCAODC_21670 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli ECRC62 0.70 BNILDI_22860 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 BNILDI_18615 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli ECOR27 0.70 NOLOHH_01445 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 NOLOHH_20460 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli ECOR38 0.70 HEPCGN_07150 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 HEPCGN_25050 galU UTP--glucose-1-phosphate uridylyltransferase GalU low > 85
Escherichia fergusonii Becca 0.70 EFB2_03652 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.36 EFB2_02690 UTP--glucose-1-phosphate uridylyltransferase — —
Enterobacter sp. TBS_079 0.70 MPMX20_00996 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.35 MPMX20_02592 UTP--glucose-1-phosphate uridylyltransferase — —
Pectobacterium carotovorum WPP14 0.70 HER17_RS15995 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.38 HER17_RS11045 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS02440 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 ECOLIN_RS07480 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF4304 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.36 GFF2752 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) — —
Marinobacter adhaerens HP15 0.65 HP15_1478 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.75 HP15_1935 UTP-glucose-1-phosphate uridylyltransferase — —
Alteromonas macleodii MIT1002 0.64 MIT1002_02814 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.38 MIT1002_00981 UTP--glucose-1-phosphate uridylyltransferase — —
Ralstonia solanacearum GMI1000 0.55 RS_RS13570 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.50 RS_RS17225 UTP--glucose-1-phosphate uridylyltransferase low > 80
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS01275 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.50 ABZR87_RS16290 UTP--glucose-1-phosphate uridylyltransferase GalU low > 80
Ralstonia solanacearum PSI07 0.54 RPSI07_RS11620 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.50 RPSI07_RS00030 UTP--glucose-1-phosphate uridylyltransferase low > 81
Castellaniella sp019104865 MT123 0.54 ABCV34_RS15370 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.46 ABCV34_RS13315 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Ralstonia solanacearum UW163 0.54 UW163_RS07945 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.50 UW163_RS16490 UTP--glucose-1-phosphate uridylyltransferase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05680 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.50 RALBFv3_RS23240 UTP--glucose-1-phosphate uridylyltransferase low > 76
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS17395 S-adenosylmethionine tRNA ribosyltransferase 0.50 RR42_RS15100 UTP--glucose-1-phosphate uridylyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.2167.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.44 Xcc-8004.2387.1 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) low > 74
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02885 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.44 LRK55_RS17920 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Lysobacter sp. OAE881 0.52 ABIE51_RS15025 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.46 ABIE51_RS09375 UTP--glucose-1-phosphate uridylyltransferase GalU low > 62
Variovorax sp. OAS795 0.52 ABID97_RS01590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.49 ABID97_RS07895 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Acinetobacter radioresistens SK82 0.52 MPMX26_00441 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.37 MPMX26_00063 UTP--glucose-1-phosphate uridylyltransferase 0.67 29
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS03135 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.45 LRK54_RS18065 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_10005 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.45 OKGIIK_07235 galU UTP--glucose-1-phosphate uridylyltransferase GalU — —
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS09545 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.44 ABZR86_RS05535 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Variovorax sp. SCN45 0.50 GFF5535 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) 0.50 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) low > 127
Acidovorax sp. GW101-3H11 0.49 Ac3H11_778 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.47 Ac3H11_3541 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS03405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.48 BPHYT_RS13860 UTP--glucose-1-phosphate uridylyltransferase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS26635 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.49 QEN71_RS05100 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2801 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.45 GFF3326 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.34 80
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04671 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.48 H281DRAFT_04467 UDP-glucose pyrophosphorylase 0.63 4
Paraburkholderia graminis OAS925 0.49 ABIE53_000832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.48 ABIE53_002940 UTP--glucose-1-phosphate uridylyltransferase low > 113
Dechlorosoma suillum PS 0.48 Dsui_3322 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.46 Dsui_2700 UTP-glucose-1-phosphate uridylyltransferase — —
Azospirillum sp. SherDot2 0.44 MPMX19_01696 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.41 MPMX19_05340 UTP--glucose-1-phosphate uridylyltransferase — —
Azospirillum brasilense Sp245 0.43 AZOBR_RS06300 S-adenosylmethionine tRNA ribosyltransferase 0.41 AZOBR_RS31075 UTP--glucose-1-phosphate uridylyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS08775 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.36 A4249_RS14885 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU3351 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (TIGR) 0.42 DVU1283 galU UTP-glucose-1-phosphate uridylyltransferase (TIGR) low > 55
Rhodospirillum rubrum S1H 0.40 Rru_A0281 Queuosine biosynthesis protein (NCBI) 0.40 Rru_A2117 UTP--glucose-1-phosphate uridylyltransferase (NCBI) — —
Dinoroseobacter shibae DFL-12 0.40 Dshi_1180 Queuosine biosynthesis protein (RefSeq) 0.42 Dshi_3577 UTP-glucose-1-phosphate uridylyltransferase (RefSeq) — —
Rhizobium sp. OAE497 0.40 ABIE40_RS09430 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.44 ABIE40_RS16250 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Phaeobacter inhibens DSM 17395 0.39 PGA1_c17420 S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA 0.43 PGA1_c34480 UTP--glucose-1-phosphate uridylyltransferase CelA low > 62
Magnetospirillum magneticum AMB-1 0.39 AMB_RS03085 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.42 AMB_RS02985 UTP--glucose-1-phosphate uridylyltransferase low > 64
Bosea sp. OAE506 0.39 ABIE41_RS17830 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.39 ABIE41_RS08590 UTP--glucose-1-phosphate uridylyltransferase — —
Fusobacterium nucleatum SB010 0.39 HUW76_03590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.41 HUW76_03920 UTP--glucose-1-phosphate uridylyltransferase GalU — —
Agrobacterium fabrum C58 0.39 Atu1678 S-adenosylmethionine tRNA ribosyltransferase-isomerase 0.43 Atu3778 UTP-glucose-1-phosphate uridylyltransferase 0.26 47
Sinorhizobium meliloti 1021 0.38 SMc01207 S-adenosylmethionine--tRNA ribosyltransferase-isomerase 0.41 SMc04023 UTP--glucose-1-phosphate uridylyltransferase low > 103
Caulobacter crescentus NA1000 0.38 CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.36 CCNA_03752 UTP-glucose-1-phosphate uridylyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.36 CCNA_03752 UTP-glucose-1-phosphate uridylyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_1011 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.44 Ga0059261_3133 UTP--glucose-1-phosphate uridylyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2053 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase (RefSeq) 0.42 DvMF_0060 UTP-glucose-1-phosphate uridylyltransferase (RefSeq) low > 51
Rhodopseudomonas palustris CGA009 0.36 TX73_013480 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.40 TX73_004570 UTP--glucose-1-phosphate uridylyltransferase GalU — —

Not shown: 13 genomes with orthologs for PS417_23250 only; 3 genomes with orthologs for PS417_14065 only