Conservation of cofitness between HP15_2926 and HP15_1474 in Marinobacter adhaerens HP15

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2926 ribosomal RNA small subunit methyltransferase E 1.0 HP15_1474 flagellar P-ring protein precursor I 0.69 20
Shewanella loihica PV-4 0.50 Shew_3224 hypothetical protein (RefSeq) 0.61 Shew_1352 flgI flagellar basal body P-ring protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.49 Sama_0575 16S ribosomal RNA methyltransferase RsmE (RefSeq) 0.61 Sama_2311 flgI flagellar basal body P-ring protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.48 SO0832 conserved hypothetical protein TIGR00046 (NCBI ptt file) 0.61 SO3242 flgI flagellar P-ring protein FlgI (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.48 Shewana3_3444 16S ribosomal RNA methyltransferase RsmE (RefSeq) 0.60 Shewana3_1328 flgI flagellar basal body P-ring protein (RefSeq) low > 73
Dickeya dadantii 3937 0.47 DDA3937_RS18555 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 DDA3937_RS13445 flagellar basal body P-ring protein FlgI low > 74
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1043 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.63 PfGW456L13_4384 Flagellar P-ring protein FlgI low > 87
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_08050 16S rRNA methyltransferase 0.63 AO353_18610 flagellar biosynthesis protein FlgI low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.42 GFF3361 Flagellar P-ring protein FlgI low > 78
Escherichia coli ECRC102 0.46 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 NIAGMN_24190 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECRC98 0.46 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 JDDGAC_07300 flgI flagellar basal body P-ring protein FlgI low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E 0.41 OHPLBJKB_02585 Flagellar P-ring protein low > 73
Escherichia coli BW25113 0.46 b2946 yggJ orf, hypothetical protein (VIMSS) 0.41 b1080 flgI homolog of Salmonella P-ring of flagella basal body (VIMSS) low > 76
Escherichia coli Nissle 1917 0.46 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 ECOLIN_RS06250 flagellar basal body P-ring protein FlgI — —
Escherichia coli ECRC62 0.46 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 BNILDI_19330 flgI flagellar basal body P-ring protein FlgI low > 75
Escherichia fergusonii Becca 0.46 EFB2_00956 Ribosomal RNA small subunit methyltransferase E 0.41 EFB2_02894 Flagellar P-ring protein low > 86
Escherichia coli ECRC100 0.46 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 OKFHMN_03640 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECOR27 0.46 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 NOLOHH_21170 flgI flagellar basal body P-ring protein FlgI low > 75
Escherichia coli ECRC101 0.46 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 MCAODC_23000 flgI flagellar basal body P-ring protein FlgI low > 87
Escherichia coli BL21 0.46 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent 0.41 ECD_01076 putative flagellar basal body protein low > 61
Escherichia coli ECRC99 0.46 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 KEDOAH_24115 flgI flagellar basal body P-ring protein FlgI — —
Pantoea sp. MT58 0.46 IAI47_03620 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.39 IAI47_12130 flagellar basal body P-ring protein FlgI low > 76
Rahnella sp. WP5 0.46 EX31_RS02660 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.40 EX31_RS11280 flagellar basal body P-ring protein FlgI low > 89
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02495 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.59 CSW01_11190 flagellar P-ring protein low > 62
Pseudomonas sp. RS175 0.46 PFR28_04209 Ribosomal RNA small subunit methyltransferase E 0.64 PFR28_00807 Flagellar P-ring protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4630 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.63 Pf6N2E2_2625 Flagellar P-ring protein FlgI low > 103
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_13565 16S rRNA methyltransferase 0.63 AO356_03915 flagellar biosynthesis protein FlgI low > 104
Serratia liquefaciens MT49 0.46 IAI46_21385 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.43 IAI46_15925 flagellar basal body P-ring protein FlgI low > 86
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_2376 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.63 Pf1N1B4_3571 Flagellar P-ring protein FlgI — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2984 RNA methyltransferase, RsmE family 0.42 EX28DRAFT_1852 Flagellar basal-body P-ring protein low > 76
Enterobacter sp. TBS_079 0.45 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E 0.41 MPMX20_01759 Flagellar P-ring protein low > 85
Dickeya dianthicola 67-19 0.45 HGI48_RS18490 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 HGI48_RS13490 flagellar basal body P-ring protein FlgI low > 71
Erwinia tracheiphila SCR3 0.45 LU632_RS05485 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 LU632_RS10430 flagellar basal body P-ring protein FlgI low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase 0.62 Psyr_3473 Flagellar P-ring protein low > 86
Dickeya dianthicola ME23 0.45 DZA65_RS19625 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 DZA65_RS13975 flagellar basal body P-ring protein FlgI low > 75
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase 0.62 Psyr_3473 Flagellar P-ring protein low > 86
Pseudomonas fluorescens SBW25 0.44 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.63 PFLU_RS21845 flagellar basal body P-ring protein FlgI low > 109
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.63 PFLU_RS21845 flagellar basal body P-ring protein FlgI low > 109
Pseudomonas putida KT2440 0.44 PP_4985 16S rRNA m3U1498 methyltransferase 0.64 PP_4383 Flagellar P-ring protein low > 96
Pseudomonas simiae WCS417 0.44 PS417_26545 16S rRNA methyltransferase 0.63 PS417_19875 flagellar P-ring protein FlgI — —
Pseudomonas stutzeri RCH2 0.43 Psest_0305 RNA methyltransferase, RsmE family 0.60 Psest_2961 Flagellar basal-body P-ring protein low > 67
Pseudomonas sp. S08-1 0.43 OH686_10855 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.61 OH686_02940 Flagellar P-ring protein FlgI low > 80
Pectobacterium carotovorum WPP14 0.43 HER17_RS02640 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.42 HER17_RS08200 flagellar basal body P-ring protein FlgI low > 75
Dechlorosoma suillum PS 0.40 Dsui_1568 RNA methyltransferase, RsmE family 0.46 Dsui_1739 flagellar basal-body P-ring protein — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10230 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.57 ABZR86_RS20110 flagellar basal body P-ring protein FlgI low > 74
Alteromonas macleodii MIT1002 0.39 MIT1002_03054 Ribosomal RNA small subunit methyltransferase E 0.57 MIT1002_01048 Basal body P-ring protein low > 70
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_11035 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.54 OKGIIK_02685 flgI Flagellar basal body P-ring protein FlgI — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS03930 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.54 LRK55_RS13180 flagellar basal body P-ring protein FlgI low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS04160 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.54 LRK54_RS13440 flagellar basal body P-ring protein FlgI low > 59
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1558.1 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.58 Xcc-8004.2786.1 Flagellar P-ring protein FlgI — —
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS01505 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.46 ABZR87_RS22255 flagellar basal body P-ring protein FlgI low > 80
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_06311 16S rRNA (uracil1498-N3)-methyltransferase 0.43 H281DRAFT_05769 flagellar P-ring protein precursor FlgI 0.40 30
Ralstonia solanacearum UW163 0.36 UW163_RS07745 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.47 UW163_RS17480 flagellar basal body P-ring protein FlgI — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS05880 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.47 RALBFv3_RS21705 flagellar basal body P-ring protein FlgI low > 76
Ralstonia solanacearum PSI07 0.36 RPSI07_RS11365 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.46 RPSI07_RS01425 flagellar basal body P-ring protein FlgI low > 81
Paraburkholderia graminis OAS925 0.35 ABIE53_003540 16S rRNA (uracil1498-N3)-methyltransferase 0.44 ABIE53_000094 flagellar P-ring protein precursor FlgI low > 113
Lysobacter sp. OAE881 0.35 ABIE51_RS05260 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.54 ABIE51_RS16705 flagellar basal body P-ring protein FlgI low > 62
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS07110 16S rRNA methyltransferase 0.47 HSERO_RS10215 flagellar P-ring protein FlgI low > 78
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS16855 16S rRNA methyltransferase 0.44 BPHYT_RS18860 flagellar P-ring protein FlgI low > 109
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS17590 16S rRNA methyltransferase 0.47 RR42_RS35690 flagellar P-ring protein FlgI low > 128
Ralstonia solanacearum GMI1000 0.34 RS_RS13825 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.46 RS_RS18830 flagellar P-ring protein FlgI low > 80
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS27020 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.44 QEN71_RS28885 flagellar basal body P-ring protein FlgI low > 153
Acidovorax sp. GW101-3H11 0.32 Ac3H11_4323 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.45 Ac3H11_1369 Flagellar P-ring protein FlgI low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF2462 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.48 GFF4079 Flagellar P-ring protein FlgI low > 90
Variovorax sp. SCN45 0.31 GFF3255 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) 0.48 GFF5722 Flagellar P-ring protein FlgI low > 127
Castellaniella sp019104865 MT123 0.28 ABCV34_RS15445 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.43 ABCV34_RS05735 flagellar basal body P-ring protein FlgI low > 48
Azospirillum sp. SherDot2 0.23 MPMX19_00577 Ribosomal RNA small subunit methyltransferase E 0.38 MPMX19_01494 Flagellar P-ring protein low > 112
Phaeobacter inhibens DSM 17395 0.22 PGA1_c02950 RNA methyltransferase-like protein 0.39 PGA1_c35600 flagellar P-ring protein FlgI low > 62
Rhodopseudomonas palustris CGA009 0.22 TX73_005910 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 TX73_020265 flagellar basal body P-ring protein FlgI low > 86
Agrobacterium fabrum C58 0.21 Atu0657 hypothetical protein 0.39 Atu0550 flagellar P-ring protein precursor low > 89
Dinoroseobacter shibae DFL-12 0.20 Dshi_3099 protein of unknown function DUF558 (RefSeq) 0.36 Dshi_3376 flagellar P-ring protein (RefSeq) low > 64
Caulobacter crescentus NA1000 0.20 CCNA_03528 RNA methyltransferase 0.40 CCNA_02665 flagellar P-ring protein FlgI low > 66
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_03528 RNA methyltransferase 0.40 CCNA_02665 flagellar P-ring protein FlgI low > 67
Rhizobium sp. OAE497 0.20 ABIE40_RS03520 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.39 ABIE40_RS02995 flagellar basal body P-ring protein FlgI low > 107
Azospirillum brasilense Sp245 0.19 AZOBR_RS11890 16S rRNA methyltransferase 0.39 AZOBR_RS11255 flagellar basal body P-ring biosynthesis protein FlgA low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.18 A4249_RS00350 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.35 A4249_RS08540 flagellar basal body P-ring protein FlgI — —
Sinorhizobium meliloti 1021 0.17 SMc00826 16S ribosomal RNA methyltransferase RsmE 0.39 SMc03032 flagellar basal body P-ring protein low > 103
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_0807 RNA methyltransferase, RsmE family 0.52 Ga0059261_2096 Flagellar basal-body P-ring protein low > 68
Bosea sp. OAE506 0.16 ABIE41_RS23100 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.41 ABIE41_RS13290 flagellar basal body P-ring protein FlgI low > 77
Desulfovibrio vulgaris Hildenborough JW710 0.16 DVU1685 conserved hypothetical protein TIGR00046 (TIGR) 0.35 DVU0516 flgI flagellar P-ring protein FlgI (TIGR) low > 55
Magnetospirillum magneticum AMB-1 0.15 AMB_RS01240 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.39 AMB_RS19360 flagellar basal body P-ring protein low > 64
Rhodospirillum rubrum S1H 0.15 Rru_A0571 hypothetical protein (NCBI) 0.37 Rru_A2849 Flagellar P-ring protein (NCBI) low > 58
Desulfovibrio vulgaris Miyazaki F 0.14 DvMF_0340 16S ribosomal RNA methyltransferase RsmE (RefSeq) 0.35 DvMF_2521 flgI flagellar basal body P-ring protein (RefSeq) low > 51

Not shown: 18 genomes with orthologs for HP15_2926 only; 0 genomes with orthologs for HP15_1474 only