Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Echinicola vietnamensis KMM 6221, DSM 17526 | 1.0 | Echvi_1243 | | glutamate synthases, NADH/NADPH, small subunit | 1.0 | Echvi_2002 | | threonine synthase | 0.90 | 12 |
Vibrio cholerae E7946 ATCC 55056 | 0.56 | CSW01_12025 | | glutamate synthase subunit beta | 0.39 | CSW01_11965 | | threonine synthase | low | > 62 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.56 | ABZR88_RS06910 | | glutamate synthase subunit beta | 0.50 | ABZR88_RS18960 | | threonine synthase | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.55 | CA265_RS08705 | | glutamate synthase | 0.47 | CA265_RS23465 | | threonine synthase | 0.70 | 59 |
Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS02565 | | glutamate synthase subunit beta | 0.23 | ABZR87_RS11450 | | threonine synthase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.52 | QEN71_RS28005 | | glutamate synthase subunit beta | 0.22 | QEN71_RS22400 | | threonine synthase | 0.61 | 75 |
Variovorax sp. OAS795 | 0.52 | ABID97_RS23220 | | glutamate synthase subunit beta | 0.24 | ABID97_RS10895 | | threonine synthase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_05621 | | glutamate synthase (NADH) small subunit | 0.22 | H281DRAFT_00811 | | L-threonine synthase | — | — |
Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS17850 | | dihydropyrimidine dehydrogenase subunit A | 0.22 | BPHYT_RS08960 | | threonine synthase | — | — |
Paraburkholderia graminis OAS925 | 0.51 | ABIE53_003732 | | glutamate synthase (NADPH/NADH) small chain | 0.23 | ABIE53_002027 | | threonine synthase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS06910 | | glutamate synthase subunit beta | 0.22 | RALBFv3_RS15880 | | threonine synthase | — | — |
Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS18985 | | glutamate synthase | 0.24 | RR42_RS12535 | | threonine synthase | — | — |
Ralstonia solanacearum UW163 | 0.51 | UW163_RS06705 | | glutamate synthase subunit beta | 0.22 | UW163_RS13325 | | threonine synthase | — | — |
Ralstonia solanacearum GMI1000 | 0.51 | RS_RS14855 | | glutamate synthase subunit beta | 0.24 | RS_RS06660 | | threonine synthase | — | — |
Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS10325 | | glutamate synthase subunit beta | 0.22 | RPSI07_RS17485 | | threonine synthase | — | — |
Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_4711 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.24 | Ac3H11_1505 | | Threonine synthase (EC 4.2.3.1) | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF1326 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.24 | GFF3936 | | Threonine synthase (EC 4.2.3.1) | — | — |
Magnetospirillum magneticum AMB-1 | 0.49 | AMB_RS11780 | | glutamate synthase subunit beta | 0.29 | AMB_RS17140 | | threonine synthase | — | — |
Dechlorosoma suillum PS | 0.49 | Dsui_1097 | | NADH/NADPH-dependent glutamate synthase small subunit | 0.23 | Dsui_2904 | | threonine synthase | — | — |
Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_15205 | | Glutamate synthase | 0.33 | OKGIIK_13570 | thrC | threonine synthase | low | > 52 |
Castellaniella sp019104865 MT123 | 0.49 | ABCV34_RS11155 | | glutamate synthase subunit beta | 0.25 | ABCV34_RS02300 | | threonine synthase | — | — |
Variovorax sp. SCN45 | 0.49 | GFF5333 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.24 | GFF2800 | | Threonine synthase (EC 4.2.3.1) | — | — |
Rhodopseudomonas palustris CGA009 | 0.48 | TX73_004595 | | glutamate synthase subunit beta | 0.26 | TX73_004325 | | threonine synthase | — | — |
Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS19590 | | dihydropyrimidine dehydrogenase subunit A | 0.23 | HSERO_RS10470 | | threonine synthase | — | — |
Bifidobacterium breve UCC2003 | 0.44 | BBR_RS15260 | | glutamate synthase subunit beta | 0.26 | BBR_RS14070 | | threonine synthase | low | > 34 |
Rhizobium sp. OAE497 | 0.44 | ABIE40_RS16270 | | glutamate synthase subunit beta | 0.26 | ABIE40_RS04230 | | threonine synthase | — | — |
Sinorhizobium meliloti 1021 | 0.42 | SMc04026 | | glutamate synthase | 0.28 | SMc00077 | | threonine synthase | — | — |
Parabacteroides merdae CL09T00C40 | 0.41 | HMPREF1078_RS01265 | | glutamate synthase subunit beta | 0.51 | HMPREF1078_RS10395 | | threonine synthase | low | > 61 |
Agrobacterium fabrum C58 | 0.41 | Atu3783 | | glutamate synthase subunit beta | 0.28 | Atu0787 | | threonine synthase | — | — |
Bacteroides ovatus ATCC 8483 | 0.40 | BACOVA_03757 | | pyridine nucleotide-disulfide oxidoreductase | 0.53 | BACOVA_03023 | | threonine synthase | low | > 94 |
Bacteroides thetaiotaomicron VPI-5482 | 0.40 | BT0552 | | glutamate synthase, small subunit (NCBI ptt file) | 0.53 | BT2401 | | threonine synthase (NCBI ptt file) | low | > 81 |
Phocaeicola dorei CL03T12C01 | 0.39 | ABI39_RS20690 | | glutamate synthase subunit beta | 0.53 | ABI39_RS10440 | | threonine synthase | low | > 72 |
Bosea sp. OAE506 | 0.39 | ABIE41_RS08570 | | glutamate synthase subunit beta | 0.30 | ABIE41_RS22985 | | threonine synthase | — | — |
Phocaeicola vulgatus CL09T03C04 | 0.38 | HMPREF1058_RS06925 | | glutamate synthase subunit beta | 0.54 | HMPREF1058_RS14730 | | threonine synthase | low | > 67 |
Bacteroides stercoris CC31F | 0.37 | HMPREF1181_RS16050 | | glutamate synthase subunit beta | 0.53 | HMPREF1181_RS00050 | | threonine synthase | low | > 56 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.25 | A4249_RS16110 | | NAD(P)-dependent oxidoreductase | 0.25 | A4249_RS00020 | | threonine synthase | 0.99 | 15 |
Sphingomonas koreensis DSMZ 15582 | 0.25 | Ga0059261_1797 | | glutamate synthase small subunit family protein, proteobacterial | 0.28 | Ga0059261_1999 | | threonine synthase | 0.79 | 21 |
Azospirillum sp. SherDot2 | 0.25 | MPMX19_02658 | | Glutamate synthase [NADPH] small chain | 0.28 | MPMX19_00671 | | Threonine synthase | — | — |
Rhodospirillum rubrum S1H | 0.25 | Rru_A0018 | | Glutamate synthase, NADH/NADPH, small subunit 2 (NCBI) | 0.32 | Rru_A3233 | | Threonine synthase (NCBI) | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.43.1 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.35 | Xcc-8004.2954.1 | | Threonine synthase (EC 4.2.3.1) | 0.95 | 2 |
Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS16800 | | FAD-dependent oxidoreductase | 0.32 | ABZR86_RS15975 | | threonine synthase (EC 4.2.3.1) (from data) | 0.89 | 30 |
Lysobacter sp. OAE881 | 0.24 | ABIE51_RS01315 | | FAD-dependent oxidoreductase | 0.35 | ABIE51_RS17530 | | threonine synthase | 0.95 | 38 |
Alteromonas macleodii MIT1002 | 0.24 | MIT1002_03140 | | Glutamate synthase [NADPH] small chain | 0.40 | MIT1002_03084 | | Threonine synthase | 0.95 | 42 |
Rhodanobacter denitrificans FW104-10B01 | 0.24 | LRK54_RS10965 | | FAD-dependent oxidoreductase | 0.33 | LRK54_RS10355 | | threonine synthase | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.24 | LRK55_RS10670 | | FAD-dependent oxidoreductase | 0.33 | LRK55_RS09995 | | threonine synthase | low | > 63 |
Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_1533 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.29 | Pf1N1B4_3014 | | Threonine synthase (EC 4.2.3.1) | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_12520 | | glutamate synthase | 0.29 | AO353_04350 | | threonine synthase | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_3751 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.28 | Pf6N2E2_3142 | | Threonine synthase (EC 4.2.3.1) | — | — |
Pseudomonas sp. RS175 | 0.24 | PFR28_05016 | | Glutamate synthase [NADPH] small chain | 0.29 | PFR28_00334 | | Threonine synthase | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_09370 | | glutamate synthase | 0.28 | AO356_06370 | | threonine synthase | — | — |
Pseudomonas stutzeri RCH2 | 0.24 | Psest_3710 | | glutamate synthase small subunit family protein, proteobacterial | 0.28 | Psest_3125 | | threonine synthase | — | — |
Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_271 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.29 | PfGW456L13_1724 | | Threonine synthase (EC 4.2.3.1) | — | — |
Pseudomonas putida KT2440 | 0.23 | PP_5075 | | glutamate synthase (NADPH) beta subunit | 0.29 | PP_1471 | | Threonine synthase | — | — |
Serratia liquefaciens MT49 | 0.23 | IAI46_22350 | | glutamate synthase small subunit | 0.40 | IAI46_03040 | | threonine synthase | 0.83 | 15 |
Pseudomonas simiae WCS417 | 0.23 | PS417_02005 | | glutamate synthase | 0.29 | PS417_22880 | | threonine synthase | — | — |
Pseudomonas syringae pv. syringae B728a | 0.23 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | 0.29 | Psyr_1291 | | L-threonine synthase | — | — |
Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS02050 | | NAD(P)-binding protein | 0.30 | PFLU_RS24545 | | threonine synthase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS02050 | | NAD(P)-binding protein | 0.30 | PFLU_RS24545 | | threonine synthase | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.23 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | 0.29 | Psyr_1291 | | L-threonine synthase | — | — |
Dinoroseobacter shibae DFL-12 | 0.23 | Dshi_0001 | | glutamate synthase, small subunit (RefSeq) | 0.29 | Dshi_1146 | | threonine synthase (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.23 | PGA1_c36090 | | glutamate synthase [NADPH] small chain | 0.30 | PGA1_c06310 | | threonine synthase ThrC | — | — |
Escherichia fergusonii Becca | 0.23 | EFB2_00610 | | Glutamate synthase [NADPH] small chain | 0.39 | EFB2_04039 | | Threonine synthase | low | > 86 |
Escherichia coli ECRC101 | 0.23 | MCAODC_08400 | gltD | glutamate synthase subunit GltD | 0.39 | MCAODC_01615 | thrC | threonine synthase | — | — |
Escherichia coli ECRC101 | 0.23 | OKFHMN_17880 | gltD | glutamate synthase subunit GltD | 0.39 | OKFHMN_11100 | thrC | threonine synthase | — | — |
Escherichia coli ECOR27 | 0.23 | NOLOHH_09680 | gltD | glutamate synthase subunit GltD | 0.39 | NOLOHH_03430 | thrC | threonine synthase | low | > 57 |
Escherichia coli ECRC98 | 0.23 | JDDGAC_21505 | gltD | glutamate synthase subunit GltD | 0.39 | JDDGAC_14695 | thrC | threonine synthase | — | — |
Shewanella loihica PV-4 | 0.23 | Shew_1031 | gltD | glutamate synthase subunit beta (RefSeq) | 0.37 | Shew_1081 | | threonine synthase (RefSeq) | 0.97 | 27 |
Escherichia coli BW25113 | 0.23 | b3213 | gltD | glutamate synthase, 4Fe-4S protein, small subunit (NCBI) | 0.39 | b0004 | thrC | threonine synthase (NCBI) | 0.50 | 57 |
Escherichia coli ECRC99 | 0.23 | KEDOAH_10270 | gltD | glutamate synthase subunit GltD | 0.39 | KEDOAH_17055 | thrC | threonine synthase | — | — |
Escherichia coli ECRC102 | 0.23 | NIAGMN_15640 | gltD | glutamate synthase subunit GltD | 0.39 | NIAGMN_08950 | thrC | threonine synthase | — | — |
Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS18480 | | glutamate synthase subunit GltD | 0.39 | ECOLIN_RS00020 | | threonine synthase | low | > 52 |
Escherichia coli BL21 | 0.23 | ECD_03078 | | glutamate synthase, 4Fe-4S protein, small subunit | 0.39 | ECD_00004 | | L-threonine synthase | 0.69 | 23 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_00487 | | Glutamate synthase [NADPH] small chain | 0.39 | OHPLBJKB_03656 | | Threonine synthase | low | > 73 |
Escherichia coli ECOR38 | 0.23 | HEPCGN_16755 | gltD | glutamate synthase subunit GltD | 0.39 | HEPCGN_09105 | thrC | threonine synthase | low | > 85 |
Shewanella sp. ANA-3 | 0.23 | Shewana3_3051 | gltD | glutamate synthase subunit beta (RefSeq) | 0.39 | Shewana3_1141 | | threonine synthase (RefSeq) | 0.85 | 43 |
Marinobacter adhaerens HP15 | 0.23 | HP15_483 | | oxidoreductase Fe-S binding subunit | 0.27 | HP15_765 | | threonine synthase | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF2957 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.39 | GFF1080 | | Threonine synthase (EC 4.2.3.1) | low | > 78 |
Dickeya dadantii 3937 | 0.23 | DDA3937_RS01660 | | FAD-dependent oxidoreductase | 0.40 | DDA3937_RS18405 | | threonine synthase | 0.74 | 64 |
Pseudomonas sp. S08-1 | 0.23 | OH686_10000 | | Glutamate synthase [NADPH] small chain | 0.28 | OH686_17765 | | threonine synthase | low | > 80 |
Shewanella oneidensis MR-1 | 0.23 | SO1324 | gltD | glutamate synthase, small subunit (NCBI ptt file) | 0.38 | SO3413 | thrC | threonine synthase (NCBI ptt file) | 0.86 | 33 |
Rahnella sp. WP5 | 0.23 | EX31_RS12510 | | FAD-dependent oxidoreductase | 0.41 | EX31_RS03935 | | threonine synthase | 0.96 | 12 |
Dickeya dianthicola ME23 | 0.23 | DZA65_RS01630 | | FAD-dependent oxidoreductase | 0.40 | DZA65_RS19475 | | threonine synthase | low | > 75 |
Shewanella amazonensis SB2B | 0.23 | Sama_0856 | gltD | glutamate synthase subunit beta (RefSeq) | 0.38 | Sama_0907 | | threonine synthase (RefSeq) | 0.81 | 44 |
Dickeya dianthicola 67-19 | 0.23 | HGI48_RS01555 | | glutamate synthase small subunit | 0.40 | HGI48_RS18335 | | threonine synthase | 0.67 | 66 |
Erwinia tracheiphila SCR3 | 0.22 | LU632_RS21320 | | glutamate synthase small subunit | 0.40 | LU632_RS02620 | thrC | threonine synthase | — | — |
Pectobacterium carotovorum WPP14 | 0.22 | HER17_RS19915 | | glutamate synthase small subunit | 0.37 | HER17_RS02805 | | threonine synthase | low | > 75 |
Caulobacter crescentus NA1000 | 0.21 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | 0.25 | CCNA_03510 | | threonine synthase | — | — |
Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | 0.25 | CCNA_03510 | | threonine synthase | — | — |
Not shown: 4 genomes with orthologs for Echvi_1243 only; 6 genomes with orthologs for Echvi_2002 only