Conservation of cofitness between ECD_00132 and ECD_00887 in Escherichia coli BL21

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00132 pantothenate synthetase 1.0 ECD_00887 ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 0.34 59
Escherichia coli BW25113 1.00 b0133 panC pantoate--beta-alanine ligase (NCBI) 1.00 b0882 clpA ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03528 Pantothenate synthetase 1.00 OHPLBJKB_02786 ATP-dependent Clp protease ATP-binding subunit ClpA low > 73
Escherichia coli ECOR27 0.99 NOLOHH_02750 panC pantoate--beta-alanine ligase 1.00 NOLOHH_22180 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Escherichia coli ECRC62 0.99 BNILDI_08920 panC pantoate--beta-alanine ligase 1.00 BNILDI_20435 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Escherichia coli ECRC101 0.99 MCAODC_00920 panC pantoate--beta-alanine ligase 1.00 MCAODC_25000 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Escherichia coli ECRC102 0.99 NIAGMN_08255 panC pantoate--beta-alanine ligase 1.00 NIAGMN_03825 clpA ATP-dependent Clp protease ATP-binding subunit ClpA
Escherichia coli ECRC99 0.99 KEDOAH_17750 panC pantoate--beta-alanine ligase 1.00 KEDOAH_22125 clpA ATP-dependent Clp protease ATP-binding subunit ClpA
Escherichia coli ECRC98 0.99 JDDGAC_14000 panC pantoate--beta-alanine ligase 1.00 JDDGAC_09420 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli ECRC100 0.99 OKFHMN_10405 panC pantoate--beta-alanine ligase 1.00 OKFHMN_05785 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Escherichia fergusonii Becca 0.99 EFB2_03911 Pantothenate synthetase 1.00 EFB2_03179 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli ECOR38 0.98 HEPCGN_08380 panC pantoate--beta-alanine ligase 1.00 HEPCGN_22900 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Klebsiella michiganensis M5al 0.89 BWI76_RS04990 pantoate--beta-alanine ligase 0.97 BWI76_RS09615 ATP-dependent Clp protease ATP-binding subunit ClpA low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.97 GFF4901 ATP-dependent Clp protease ATP-binding subunit ClpA low > 78
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3729 pantoate--beta-alanine ligase 0.97 EX28DRAFT_2050 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_00826 Pantothenate synthetase 0.97 MPMX20_01544 ATP-dependent Clp protease ATP-binding subunit ClpA low > 85
Serratia liquefaciens MT49 0.76 IAI46_21245 pantoate--beta-alanine ligase 0.90 IAI46_08515 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pectobacterium carotovorum WPP14 0.74 HER17_RS05555 pantoate--beta-alanine ligase 0.91 HER17_RS12400 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Pantoea sp. MT58 0.73 IAI47_15660 pantoate--beta-alanine ligase 0.92 IAI47_12945 ATP-dependent Clp protease ATP-binding subunit ClpA low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS20105 panC pantoate--beta-alanine ligase 0.89 LU632_RS09705 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Rahnella sp. WP5 0.73 EX31_RS03285 pantoate--beta-alanine ligase 0.91 EX31_RS18560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 89
Dickeya dianthicola ME23 0.70 DZA65_RS17160 pantoate--beta-alanine ligase 0.91 DZA65_RS09885 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS15960 pantoate--beta-alanine ligase 0.91 DDA3937_RS09560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS16075 pantoate--beta-alanine ligase 0.90 HGI48_RS09575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 71
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_03130 pantoate--beta-alanine ligase 0.77 CSW01_05805 ATP-dependent Clp protease ATP-binding subunit ClpA
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0827 pantothenate synthetase 0.65 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0827 pantothenate synthetase 0.65 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pseudomonas sp. RS175 0.54 PFR28_03722 Pantothenate synthetase 0.65 PFR28_02613 ATP-dependent Clp protease ATP-binding subunit ClpA
Pseudomonas sp. S08-1 0.53 OH686_17240 pantoate--beta-alanine ligase 0.65 OH686_00235 ATP-dependent Clp protease ATP-binding subunit ClpA
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16055 pantoate--beta-alanine ligase 0.65 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.65 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.65 PfGW456L13_2646 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2853 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.65 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Pseudomonas putida KT2440 0.53 PP_4700 pantothenate synthetase 0.65 PP_4008 ATP-dependent serine protease low > 96
Pseudomonas stutzeri RCH2 0.52 Psest_0995 pantoate--beta-alanine ligase 0.64 Psest_2027 ATP-dependent Clp protease ATP-binding subunit clpA
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_14380 pantoate--beta-alanine ligase 0.65 AO353_27675 ATP-dependent Clp protease ATP-binding subunit ClpA 0.29 79
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS25755 pantoate--beta-alanine ligase 0.65 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas fluorescens SBW25 0.51 PFLU_RS25755 pantoate--beta-alanine ligase 0.65 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Marinobacter adhaerens HP15 0.50 HP15_323 pantothenate synthetase 0.67 HP15_2080 ATP-dependent Clp protease ATP-binding subunit ClpA
Pseudomonas simiae WCS417 0.50 PS417_23915 pantoate--beta-alanine ligase 0.66 PS417_16510 Clp protease ClpX low > 88
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0062 pantoate--beta-alanine ligase 0.64 B158DRAFT_1505 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92)
Shewanella amazonensis SB2B 0.48 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq) 0.70 Sama_2056 ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq)
Shewanella oneidensis MR-1 0.48 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file) 0.69 SO2626 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file)
Alteromonas macleodii MIT1002 0.48 MIT1002_03695 Pantothenate synthetase 0.70 MIT1002_01834 ATP-dependent Clp protease ATP-binding subunit ClpA
Shewanella loihica PV-4 0.47 Shew_3134 pantoate--beta-alanine ligase (RefSeq) 0.70 Shew_1566 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq)
Shewanella sp. ANA-3 0.47 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) 0.70 Shewana3_1753 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq)
Lysobacter sp. OAE881 0.46 ABIE51_RS08030 pantoate--beta-alanine ligase 0.64 ABIE51_RS11490 ATP-dependent Clp protease ATP-binding subunit ClpA
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS15120 pantoate--beta-alanine ligase 0.63 LRK54_RS00420 ATP-dependent Clp protease ATP-binding subunit ClpA
Rhodanobacter denitrificans MT42 0.45 LRK55_RS14835 pantoate--beta-alanine ligase 0.63 LRK55_RS00160 ATP-dependent Clp protease ATP-binding subunit ClpA low > 63
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_2453 pantoate--beta-alanine ligase 0.57 Ga0059261_1001 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92)
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_03890 panC pantoate--beta-alanine ligase 0.62 OKGIIK_06890 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 52
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS00820 pantoate--beta-alanine ligase 0.64 ABZR86_RS02200 ATP-dependent Clp protease ATP-binding subunit ClpA
Acinetobacter radioresistens SK82 0.43 MPMX26_00546 Pantothenate synthetase 0.59 MPMX26_01284 ATP-dependent Clp protease ATP-binding subunit ClpA
Rhodopseudomonas palustris CGA009 0.43 TX73_016310 pantoate--beta-alanine ligase 0.58 TX73_016270 ATP-dependent Clp protease ATP-binding subunit ClpA
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3051.1 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.62 Xcc-8004.2754.1 ATP-dependent Clp protease ATP-binding subunit ClpA
Magnetospirillum magneticum AMB-1 0.41 AMB_RS22115 pantoate--beta-alanine ligase 0.59 AMB_RS05705 ATP-dependent Clp protease ATP-binding subunit ClpA
Sinorhizobium meliloti 1021 0.41 SMc01880 pantoate--beta-alanine ligase 0.57 SMc02109 ATP-dependent Clp protease ATP-binding subunit protein
Variovorax sp. OAS795 0.40 ABID97_RS07430 pantoate--beta-alanine ligase 0.61 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA low > 91
Phocaeicola vulgatus CL09T03C04 0.40 HMPREF1058_RS18260 pantoate--beta-alanine ligase 0.41 HMPREF1058_RS09040 AAA family ATPase
Rhodospirillum rubrum S1H 0.40 Rru_A3320 Cytidyltransferase-related (NCBI) 0.59 Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI)
Variovorax sp. SCN45 0.40 GFF2578 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.62 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA low > 127
Dinoroseobacter shibae DFL-12 0.40 Dshi_2952 pantoate--beta-alanine ligase (RefSeq) 0.59 Dshi_2939 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq)
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS14555 pantoate--beta-alanine ligase 0.41 ABI39_RS03345 AAA family ATPase
Bosea sp. OAE506 0.40 ABIE41_RS14875 pantoate--beta-alanine ligase 0.58 ABIE41_RS18235 ATP-dependent Clp protease ATP-binding subunit ClpA low > 77
Agrobacterium fabrum C58 0.39 Atu3482 pantoate--beta-alanine ligase 0.57 Atu1364 ATP-dependent Clp protease, ATP-binding subunit low > 89
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS15520 pantoate--beta-alanine ligase 0.64 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein
Caulobacter crescentus NA1000 0.39 CCNA_02247 pantoate-beta-alanine ligase 0.59 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA
Dechlorosoma suillum PS 0.39 Dsui_1470 pantoate--beta-alanine ligase 0.62 Dsui_0009 ATP-dependent Clp protease ATP-binding subunit clpA
Phaeobacter inhibens DSM 17395 0.39 PGA1_c32040 pantothenate synthetase PanC 0.57 PGA1_c25150 ATP-dependent Clp protease ATP-binding subunit
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_02247 pantoate-beta-alanine ligase 0.59 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA
Rhizobium sp. OAE497 0.39 ABIE40_RS09460 pantoate--beta-alanine ligase 0.58 ABIE40_RS08865 ATP-dependent Clp protease ATP-binding subunit ClpA low > 107
Azospirillum brasilense Sp245 0.38 AZOBR_RS09715 pantoate--beta-alanine ligase 0.59 AZOBR_RS05175 ATP-dependent Clp protease ATP-binding protein 0.33 43
Ralstonia solanacearum PSI07 0.38 RPSI07_RS12935 pantoate--beta-alanine ligase 0.62 RPSI07_RS12575 ATP-dependent Clp protease ATP-binding subunit ClpA
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS00030 pantoate--beta-alanine ligase 0.63 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU2448 panC pantoate--beta-alanine ligase (TIGR) 0.51 DVU1602 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA (TIGR) low > 55
Ralstonia solanacearum GMI1000 0.38 RS_RS11985 pantoate--beta-alanine ligase 0.63 RS_RS12370 ATP-dependent Clp protease ATP-binding subunit ClpA
Ralstonia solanacearum UW163 0.37 UW163_RS09235 pantoate--beta-alanine ligase 0.62 UW163_RS08860 ATP-dependent Clp protease ATP-binding subunit ClpA
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS04435 pantoate--beta-alanine ligase 0.62 RALBFv3_RS04810 ATP-dependent Clp protease ATP-binding subunit ClpA
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2942 panC pantoate--beta-alanine ligase (RefSeq) 0.51 DvMF_0458 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq)
Azospirillum sp. SherDot2 0.37 MPMX19_04465 Pantothenate synthetase 0.59 MPMX19_00503 ATP-dependent Clp protease ATP-binding subunit ClpA low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS06825 pantoate--beta-alanine ligase 0.58 A4249_RS08390 ATP-dependent Clp protease ATP-binding subunit ClpA
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00150 pantothenate synthetase 0.61 H281DRAFT_04082 ATP-dependent Clp protease ATP-binding subunit ClpA
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16055 pantothenate synthetase 0.62 RR42_RS17105 Clp protease ClpX
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS04925 pantothenate synthetase 0.61 BPHYT_RS15710 ATP-dependent Clp protease ATP-binding protein
Castellaniella sp019104865 MT123 0.36 ABCV34_RS14585 pantoate--beta-alanine ligase 0.60 ABCV34_RS05305 ATP-dependent Clp protease ATP-binding subunit ClpA
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS25065 pantoate--beta-alanine ligase 0.62 QEN71_RS03005 ATP-dependent Clp protease ATP-binding subunit ClpA
Acidovorax sp. GW101-3H11 0.34 Ac3H11_3840 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.61 Ac3H11_2456 ATP-dependent Clp protease ATP-binding subunit ClpA low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF1220 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.61 GFF4521 ATP-dependent Clp protease ATP-binding subunit ClpA

Not shown: 10 genomes with orthologs for ECD_00132 only; 1 genomes with orthologs for ECD_00887 only